Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1087
         (382 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    22   8.7  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    22   8.7  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
 Frame = -2

Query: 348 NIRVYNANIVFLFK*LFEAIVIRK-----NISRNRTNTIQIMGGIETRVRIRNKSGTSQF 184
           NIR+  A+  FLF+ +   I+IRK      ++        I+G + T     N+  T+  
Sbjct: 18  NIRLMQASGHFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNLATNADDVNEL-TANT 76

Query: 183 FVELFDLICSTEYDFYLVFTQN 118
              LF     T++ ++ V ++N
Sbjct: 77  ITTLFFTHSVTKFIYFAVNSEN 98


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
 Frame = -2

Query: 348 NIRVYNANIVFLFK*LFEAIVIRK-----NISRNRTNTIQIMGGIETRVRIRNKSGTSQF 184
           NIR+  A+  FLF+ +   I+IRK      ++        I+G + T     N+  T+  
Sbjct: 18  NIRLMQASGHFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNLATNADDVNEL-TANT 76

Query: 183 FVELFDLICSTEYDFYLVFTQN 118
              LF     T++ ++ V ++N
Sbjct: 77  ITTLFFTHSVTKFIYFAVNSEN 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,341
Number of Sequences: 2352
Number of extensions: 4310
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)