Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1086
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.15 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.6  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 199 WEQYYQPHHNRSVRKNNQREKRKRASIETAGLQSRNAK 312
           W      + N   RKNN  + R   S    G  SRN+K
Sbjct: 376 WHNNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSRNSK 413



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 138 NSPNQNTNNTES 173
           N+PN N NNT S
Sbjct: 391 NNPNDNRNNTSS 402


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 348 ITNLESLLADISVRYIQLKESDFE 419
           + +LES  AD++  ++Q ++  FE
Sbjct: 328 VKSLESRYADLNENFLQCQDEKFE 351


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 108 NYLKDF*CEMNSPNQNTNNTESLLRSIINIL 200
           N LK   C+++ PN        LL  ++N++
Sbjct: 37  NQLKQMGCDLDIPNSVVQKHLILLMVLVNLI 67


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 83  RYPLLNNY*LFERFLMRNE 139
           RY  + +Y LF+ F+ RN+
Sbjct: 139 RYVFVTSYLLFDYFVQRNQ 157


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 3   KYGAYNPLPTSFT 41
           KYGA  P PTS T
Sbjct: 67  KYGALWPQPTSVT 79


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 329 STLQSKNY*FRVSASRHISEIYTT 400
           STL  K Y   + + ++I +I+TT
Sbjct: 425 STLTQKEYLENLPSDKYIIQIWTT 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,967
Number of Sequences: 336
Number of extensions: 3269
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)