Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1084
(439 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 36 0.019
01_01_1021 + 8061007-8061150,8061244-8061708 32 0.23
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 31 0.40
04_03_0913 + 20777859-20780309 31 0.53
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 30 0.71
03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700... 30 0.71
12_02_0674 - 21745321-21746223,21746229-21747608 30 0.93
12_01_0368 + 2815424-2815658,2816898-2817120,2818329-2818680,281... 29 1.2
11_01_0345 + 2579602-2579836,2581262-2581484,2582822-2583173,258... 29 1.2
02_05_0303 + 27717097-27717149,27717515-27717635,27717746-277180... 29 1.2
01_01_0139 + 1263356-1264273 29 1.2
07_03_1164 + 24451808-24451868,24452690-24452923,24453735-244537... 29 1.6
12_02_1264 + 27430536-27430811,27431085-27431198,27431496-274316... 29 2.2
02_01_0066 + 482598-483761 29 2.2
11_01_0566 + 4466318-4466695,4466736-4466909,4466941-4467038,446... 28 2.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 28 3.8
03_06_0084 + 31536286-31536718,31536907-31536983,31537380-315374... 28 3.8
08_01_0758 - 7193287-7193871,7193965-7194421,7194437-7194655,719... 27 5.0
07_01_1101 + 10122804-10123758,10123872-10123910,10124072-101242... 27 5.0
06_01_0835 - 6315762-6316844 27 5.0
04_03_0914 + 20788103-20789642,20790036-20790529 27 5.0
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 27 5.0
02_02_0450 - 10381360-10381391,10381737-10382283,10382770-103829... 27 5.0
02_01_0393 - 2863335-2864534 27 5.0
10_02_0144 + 5815403-5815520,5815551-5816314 27 6.6
10_02_0091 - 5190536-5191794,5191878-5192030,5192501-5193099,519... 27 6.6
01_06_0922 - 33022709-33023545 27 6.6
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 27 8.7
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 27 8.7
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 27 8.7
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 27 8.7
03_01_0010 - 94931-96034,96117-96442,97154-97283 27 8.7
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 27 8.7
02_04_0077 - 19491844-19492154,19492456-19492531,19492841-19492852 27 8.7
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 27 8.7
01_01_0470 - 3464634-3466520 27 8.7
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 QPDTPATSSTTSIFSAVN-ESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAV 181
+P TP+ S+T + + +S+ + A +++P++ +P PTK ST T A +++
Sbjct: 109 RPTTPSRRSSTVVAPKQSIAASRPVPARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSD 168
Query: 182 SIFGTAVASQ 211
S ++Q
Sbjct: 169 SAAARTTSAQ 178
>01_01_1021 + 8061007-8061150,8061244-8061708
Length = 202
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 101 QPKPDV-PTKDELSTETNTASPATTSAVSIFGTAVASQP 214
Q +P+V PTK+E +T +++ SPATT S A ++P
Sbjct: 46 QSEPEVEPTKEETATSSSSPSPATTPTPSPAAAAPKAKP 84
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +2
Query: 17 PATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVS 184
PATS S + ++ AS +P+ P VP T T TASPA AVS
Sbjct: 85 PATSKAPSNQAPPTQTVPAAPASQ-APVAPATTVPVTVSAPTPTATASPAPAVAVS 139
>04_03_0913 + 20777859-20780309
Length = 816
Score = 30.7 bits (66), Expect = 0.53
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = -2
Query: 306 EPVADPPNIEFCVVTLKGVAVLNIELDAVVFGCDATAVPKMETAEVV-AGDAVLVSVESS 130
+P+ DP ++E + +A+LN ++V+ A A ++ +G+ +L ++ +S
Sbjct: 84 KPIDDPTSVELTIFHDGNLAILNQSTKSIVWSTQANITANNTVATLLNSGNLILTNLSNS 143
Query: 129 SFVGTSGFGWIGEVVEAAISLE-DSFTALNIEVV 31
V F + + L D T LN +++
Sbjct: 144 LEVFWQSFDYPTDTFFPGAKLGWDKVTGLNRQII 177
>10_08_0824 + 20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 355 QWFWSLTGRGWWCPKYGTRRRSSKY 281
QW W LTG+ +W P R R KY
Sbjct: 960 QWLWPLTGQVFW-PGIADREREEKY 983
>03_06_0072 -
31469595-31469684,31469762-31469848,31469968-31470036,
31470117-31470185,31470269-31471306
Length = 450
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 366 ALSTNGFGHSLVVAGGVPNMEPVADPPN 283
A++ NG GHSL+++ PV DPP+
Sbjct: 89 AIAANGGGHSLLLSRSCATKAPVNDPPS 116
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.9 bits (64), Expect = 0.93
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +2
Query: 8 PDTPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPT---KDELSTETNTASPATTSA 178
P P +SST+ I + +S+L AST P +PT ELST T+ P+T S
Sbjct: 457 PPVPLSSSTSEIPTTTG-TSELSTASTGELPSPTVKIPTTACTGELSTPTSQI-PSTAST 514
Query: 179 VSIFGTAVASQPKXXXXXXXXXXXXXXXVTTQNSIFGGSATGSIFGTP 322
+ TA P T + S+ S+T I TP
Sbjct: 515 REL-STATGKIPSTPRTNPLSTATSKIPSTPRTSLL-SSSTSKIPSTP 560
Score = 27.5 bits (58), Expect = 5.0
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +2
Query: 14 TPATSSTTSIFSAVNESSKLIAASTTSPIQPK----PDVPTKDELSTETNTASPATTSAV 181
T TSST S +SK + +TSP+ P ELST T+ P TT A
Sbjct: 585 TGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGELSTPTDKI-PTTTRAG 643
Query: 182 SIFGTAVASQP 214
+ TA + P
Sbjct: 644 DL-STATSKIP 653
>12_01_0368 +
2815424-2815658,2816898-2817120,2818329-2818680,
2819354-2819620
Length = 358
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 135 SSSFVGTSGFGWIGEVVEAAISL 67
S +F G+SG+GW+ V+ A SL
Sbjct: 278 SGAFKGSSGWGWVSNVIGAGASL 300
>11_01_0345 +
2579602-2579836,2581262-2581484,2582822-2583173,
2583894-2584125,2584683-2585266
Length = 541
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 135 SSSFVGTSGFGWIGEVVEAAISL 67
S +F G+SG+GW+ V+ A SL
Sbjct: 278 SGAFKGSSGWGWVSNVIGAGASL 300
>02_05_0303 +
27717097-27717149,27717515-27717635,27717746-27718057,
27718172-27718276,27718367-27718821,27718964-27719094,
27719215-27719268,27719378-27719747,27719848-27719981,
27720081-27720319
Length = 657
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 102 SRNLMCLQRMNFQQKLTLHHQRRLLLSPFLEQPSHHNQKLQHLAQYSVQLRLLVLQHKIL 281
SRNL LQ H L P +EQ +H QKL H + L + QH ++
Sbjct: 172 SRNLAFLQDHQGNFPSIYDHPSITLKDPIIEQINHSVQKLTH----ATNLLQFIGQHALI 227
Query: 282 YLEDL 296
ED+
Sbjct: 228 IPEDM 232
>01_01_0139 + 1263356-1264273
Length = 305
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 14 TPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSA 178
+PA +T + SA S+ +A S +P+ PT+ + T+ +P+TT++
Sbjct: 83 SPAAGATRAKASASASSTPALAPWRPSSRRPRSSAPTRRTAAGATSPTTPSTTTS 137
>07_03_1164 +
24451808-24451868,24452690-24452923,24453735-24453768,
24454372-24454627
Length = 194
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = -2
Query: 426 LGTAVDTGTGVPNTDVTGFGALSTNGFGHSLVVAGGVPNMEPVADPPNIEFCVVTLKGVA 247
+GT TG G T TG G L G A G+ +A FC V L VA
Sbjct: 138 MGTTTGTGMGTGTTTGTGLGGLGPTGTSSMDTAAAGLHLRAGLA-----TFCTVLLSFVA 192
Query: 246 V 244
+
Sbjct: 193 I 193
>12_02_1264 +
27430536-27430811,27431085-27431198,27431496-27431630,
27431722-27431823,27432290-27432361,27432427-27432526,
27433122-27433204,27433689-27433787,27433899-27433949,
27434088-27434210,27434431-27434532
Length = 418
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +3
Query: 222 QHLAQYSVQLRLLVLQHKILYLEDLRRVPYLGHHQPRPVSDQNHWCLAHRNRSHQYSERL 401
+ L QY+ Q +L V +++ED++R+ +L + HW N + + RL
Sbjct: 258 RELHQYNYQAKLTVDFIPDIHIEDVKRILFLHKDHHASLDGDMHWASIPNNNLNTVALRL 317
Query: 402 YLYRPQYLAR 431
+ + +A+
Sbjct: 318 KQWMFEVVAK 327
>02_01_0066 + 482598-483761
Length = 387
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -2
Query: 321 GVPNMEPVADPPNIEFCVVTLKGVAVLNIELDAVVFGCDATAVPKMETAEVVAGDAVLVS 142
G N++ + P + + + G +L A V PKME AGD+VL
Sbjct: 71 GPGNVDFLHLPGDDSLLALDVDGRGLLYSAASAAVRYMPDPCKPKMEPISFTAGDSVLYV 130
Query: 141 VESSSFVGTSG 109
+E F G G
Sbjct: 131 IERVPFSGNPG 141
>11_01_0566 +
4466318-4466695,4466736-4466909,4466941-4467038,
4467211-4467346
Length = 261
Score = 28.3 bits (60), Expect = 2.9
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +2
Query: 26 SSTTSIFSAVNESSKLI--AASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSIFGTA 199
S T A N+++ I AAS+ +P+ P P PTK ST +++ V+ T
Sbjct: 40 SKATEETIAANKATSTILKAASSPTPMAPPPPTPTK--CSTICSSSDAKADITVATMVTC 97
Query: 200 VASQPKXXXXXXXXXXXXXXXVTTQNSIFGGS 295
V S + T +S GG+
Sbjct: 98 VTSVESSMELVATDSTTKGTHINTPDSTKGGA 129
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 PDTPATSSTTSIF-SAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTAS 160
P TP+ SS T+ S + E SKL P P P +P S +T+S
Sbjct: 282 PSTPSCSSDTAASRSRLPELSKLPPIPPPPPPPPPPPMPRSRSASPSPSTSS 333
>03_06_0084 +
31536286-31536718,31536907-31536983,31537380-31537428,
31537778-31538048,31540876-31541104,31541511-31541750
Length = 432
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 8 PDTPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTK 127
P ATSS + F +S A P P P +PT+
Sbjct: 238 PPAAATSSAAAYFLCATTTSTATAPLAVVPSPPAPTIPTR 277
>08_01_0758 -
7193287-7193871,7193965-7194421,7194437-7194655,
7194881-7195419
Length = 599
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 361 KHQWFWSLTGRGWWCPKYGTRRRSSKYRILC-CNTKRRSCTE 239
K Q FW LT +G Y TR RI+C ++ SC E
Sbjct: 395 KMQKFWDLTFQGMLLNYYQTRVEKWNMRIICMVISESESCLE 436
>07_01_1101 +
10122804-10123758,10123872-10123910,10124072-10124251,
10124841-10124951,10125448-10125560
Length = 465
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 TPATSSTTSIFSAVNESS-KLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVS-I 187
+PA + T+ A+NE K AA+T P P P ++ A+ S V+ +
Sbjct: 21 SPAAAVMTAEADAINEEQDKAAAATTADHTAPPPPPPAAAAVADHAGEMDMASGSGVAHL 80
Query: 188 FGTAVASQPK 217
AVA P+
Sbjct: 81 APPAVAPAPR 90
>06_01_0835 - 6315762-6316844
Length = 360
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 8 PDTPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASP 163
PD+P S++T+ ++ + S + A S P P P E++ T +P
Sbjct: 285 PDSPKGSASTTTTTSEGDESAISACSPPLPPPPPPPPAALPEMANLDFTEAP 336
>04_03_0914 + 20788103-20789642,20790036-20790529
Length = 677
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -2
Query: 303 PVADPPNIEFCVVTLKGVAVLNIELDAVVFGCDATAVPKMETAEVV-AGDAVLVSVESSS 127
P+ DP ++E + + +LN +++ A +A ++ +G+ +L + +SS
Sbjct: 86 PINDPTSLELTIFHDGNLVILNRSAKTIIWSSQANITNNNTSAMLLSSGNLILTNPSNSS 145
Query: 126 FVGTSGFGWIGEVVEAAISLE-DSFTALNIEVV 31
V F + + + L D T LN ++
Sbjct: 146 EVLWQSFDYPTDTLFPRAKLGWDKVTGLNRRII 178
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 78 PLQL-LHRSSRNLMCLQRMNFQQKLTLHHQRRLLLSPFLEQPSHHNQKLQHLA 233
PL L L+ N L + QQ+ HH ++LL S Q HN LQH A
Sbjct: 57 PLNLVLNHVLHNPAALAAYHHQQQQQYHHHQQLLHSSAYHQNPTHN--LQHRA 107
>02_02_0450 -
10381360-10381391,10381737-10382283,10382770-10382952,
10383123-10383863
Length = 500
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 23 TSSTTSIFSAVNESSKLI-AASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSI 187
+ ++ I +A+ ++ ++ A S T+P+ P VPTK N + AT S+ I
Sbjct: 105 SKASEEIIAAIRATTTVLKATSPTAPMAPPTPVPTKCLTECPNNNFTWATASSSHI 160
>02_01_0393 - 2863335-2864534
Length = 399
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 2 KQPDTPATSSTTSIF--SAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATT 172
KQP PA+++ T + SA S A++TT P++ + PT + + PA T
Sbjct: 111 KQPPVPASAAATRAYSSSAALVPSPAPASATTPPMKQRTGQPTPAAIKRQ-RQLQPAPT 168
>10_02_0144 + 5815403-5815520,5815551-5816314
Length = 293
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 17 PATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSI 187
PATSST F+ N+ ++ A ++SP P E TA+ A ++A +
Sbjct: 119 PATSSTRCRFAVANKRRQIRARRSSSPTWGSTGWPPTPLRLAEHVTAAGAPSTATDL 175
>10_02_0091 -
5190536-5191794,5191878-5192030,5192501-5193099,
5193771-5193837,5194177-5195170
Length = 1023
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 348 FGHSLVVAGGVPNMEPVADPPNIEFCVVTLKGVAVLNIELDAVVFGCDATAVPKM 184
F H + + GV P I F + + + V++ +LD + G D T PK+
Sbjct: 150 FNHLIPIKAGVDVYNLTWKAPGISFTISEMMIITVVSCDLDVFLIGQDNT--PKL 202
>01_06_0922 - 33022709-33023545
Length = 278
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +2
Query: 14 TPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSIFG 193
+PA S V S + + + SP++P P P + E T P+ A S G
Sbjct: 198 SPAPSLQRKPPVPVRPSPRRVQEAPPSPLEPPPPPPPQPEEDAMTADGEPSIADAASAGG 257
>11_06_0760 + 27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 56 NESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSIFGTAV 202
NE++ + +TTS ++ K+ ++T+TN + AT + G +
Sbjct: 1121 NEATAAMKEATTSTVENVATEGNKENVTTDTNKENVATAEKKEVKGPII 1169
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 8 PDTPATSSTTSIFSAVNESSKLIAASTTSPIQPK 109
PD TS TTS+ A K AA+T ++ K
Sbjct: 335 PDPVTTSVTTSVIPAAQTKKKKSAAATPEELEVK 368
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 2 KQPDTPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNT 154
K +TPA TTS+ +E+ ++ AS+ P + + T++ E T
Sbjct: 126 KDAETPAAQDTTSVVEDKSETPEM-TASSEKPEEEGSNAATEESNEAEEET 175
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 411 DTGTGVPNTDVTGFGALSTNGFGHSLVVAGGVPNMEPVADPPNI 280
D G G P+++ T G+ S +G G S G M P PP +
Sbjct: 612 DGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMSPSPSPPPV 655
>03_01_0010 - 94931-96034,96117-96442,97154-97283
Length = 519
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = -2
Query: 432 LALGTAVDTGTGVPNTDVTGFGALS-----TNG--FGHSLVVAGGVPNMEP 301
+A+G V+ G + VT F LS + G FG+ L ++GGV +MEP
Sbjct: 1 MAIGAFVEGGGSGYSGRVTPFVVLSCIVAGSGGILFGYDLGISGGVTSMEP 51
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 405 GTGVPNTDVTGFGALSTNGFGHSLVVAGGVPNMEPVADPP 286
GT P+ + TG A++T+G G + G + V +PP
Sbjct: 256 GTAAPSINKTGNAAVATDGNGAAPQRGGAPGKNQTVPNPP 295
>02_04_0077 - 19491844-19492154,19492456-19492531,19492841-19492852
Length = 132
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 23 TSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSIFGTAV 202
T TS + A +S AA+ +P P E E A P TT+A + A
Sbjct: 61 TGKKTSFWEAAEAASDSAAAAAPAP------APATAEAEAEAEAAPPTTTAAEAPAIAAA 114
Query: 203 ASQP 214
A+ P
Sbjct: 115 AAPP 118
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 26.6 bits (56), Expect = 8.7
Identities = 23/98 (23%), Positives = 41/98 (41%)
Frame = +3
Query: 138 QQKLTLHHQRRLLLSPFLEQPSHHNQKLQHLAQYSVQLRLLVLQHKILYLEDLRRVPYLG 317
Q L Q++L L+Q Q+ Q L Q Q + + Q + + L++
Sbjct: 35 QNALLTQQQQKLPQHQHLQQQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQ 94
Query: 318 HHQPRPVSDQNHWCLAHRNRSHQYSERLYLYRPQYLAR 431
+QP+ S Q+ RN+ Q S++ P +A+
Sbjct: 95 QNQPQHSSQQSQQTTTLRNQ-QQISQQQTARTPVSMAQ 131
>01_01_0470 - 3464634-3466520
Length = 628
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 59 ESSKLIAASTTSPIQPKPDVPTKDELSTETNTASPATTSAVSIFGTAVASQP 214
+S +L S +SP P P P ++ A+P SA+S+F QP
Sbjct: 22 DSLRLRLRSPSSP--PPPPPPDDPVVALHAIRAAPTPASAISVFRALPPPQP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,451,070
Number of Sequences: 37544
Number of extensions: 273887
Number of successful extensions: 1327
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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