Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1079
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    91   2e-20
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            22   8.8  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   8.8  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 42/88 (47%), Positives = 56/88 (63%)
 Frame = +3

Query: 81  RMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGE 260
           +M  SE FD++M  +GVG++ RK  N+++PTVEL K+GDEY   T S  +T         
Sbjct: 39  KMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSSSWAM 98

Query: 261 EFEEDRADGAKVKSVCTFEGNTLKQVQK 344
           EF+E+  DG  VKSVCTF+GN L   QK
Sbjct: 99  EFDEETVDGRMVKSVCTFDGNKLIHEQK 126


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 147 KAANAVTPTVELRKDGDEYNLVTSST 224
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 147 KAANAVTPTVELRKDGDEYNLVTSST 224
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 147 KAANAVTPTVELRKDGDEYNLVTSST 224
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 167  GDSVGGFAGDQTHA 126
            G   G FAGD+TH+
Sbjct: 988  GSDDGSFAGDKTHS 1001


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 167  GDSVGGFAGDQTHA 126
            G   G FAGD+TH+
Sbjct: 986  GSDDGSFAGDKTHS 999


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 147 KAANAVTPTVELRKDGDEYNLVTSST 224
           K     TPT  +   GD+ N   +ST
Sbjct: 89  KTGTGATPTSSIASSGDDTNSSNNST 114


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 220 EEVTKLYSSPSLRSS 176
           E V K+YSS SLR S
Sbjct: 128 ENVIKVYSSKSLRKS 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,897
Number of Sequences: 2352
Number of extensions: 8349
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)