BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1079 (452 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p pro... 129 1e-30 BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p pro... 127 6e-30 BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p pro... 127 6e-30 AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB... 127 6e-30 AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC... 113 1e-25 BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p pro... 108 4e-24 BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p pro... 108 4e-24 AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA... 108 4e-24 AY089569-1|AAL90307.1| 168|Drosophila melanogaster RE04580p pro... 27 8.9 AE014298-2796|AAF48913.1| 168|Drosophila melanogaster CG7406-PA... 27 8.9 >BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p protein. Length = 142 Score = 129 bits (312), Expect = 1e-30 Identities = 63/137 (45%), Positives = 88/137 (64%) Frame = +3 Query: 36 YKVNL*KWNS*ARNTRMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVT 215 ++ N+ K + + ++ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T Sbjct: 6 HRPNIPKMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTT 65 Query: 216 SSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEE 395 +STFKT+ + FK G EF+E+ DG VKS+ T +GN L Q QK T VREF E Sbjct: 66 TSTFKTSAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNE 123 Query: 396 MKAVMTAKDVTCTRVYK 446 + +T +V C RVYK Sbjct: 124 LITTLTIGNVKCVRVYK 140 >BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p protein. Length = 130 Score = 127 bits (307), Expect = 6e-30 Identities = 61/122 (50%), Positives = 81/122 (66%) Frame = +3 Query: 81 RMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGE 260 ++ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G Sbjct: 9 KLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGV 68 Query: 261 EFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 440 EF+E+ DG VKS+ T +GN L Q QK T VREF E+ +T +V C RV Sbjct: 69 EFDEETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRV 126 Query: 441 YK 446 YK Sbjct: 127 YK 128 >BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p protein. Length = 130 Score = 127 bits (307), Expect = 6e-30 Identities = 61/122 (50%), Positives = 81/122 (66%) Frame = +3 Query: 81 RMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGE 260 ++ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G Sbjct: 9 KLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGV 68 Query: 261 EFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 440 EF+E+ DG VKS+ T +GN L Q QK T VREF E+ +T +V C RV Sbjct: 69 EFDEETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRV 126 Query: 441 YK 446 YK Sbjct: 127 YK 128 >AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB, isoform B protein. Length = 130 Score = 127 bits (307), Expect = 6e-30 Identities = 61/122 (50%), Positives = 81/122 (66%) Frame = +3 Query: 81 RMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGE 260 ++ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G Sbjct: 9 KLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGV 68 Query: 261 EFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 440 EF+E+ DG VKS+ T +GN L Q QK T VREF E+ +T +V C RV Sbjct: 69 EFDEETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRV 126 Query: 441 YK 446 YK Sbjct: 127 YK 128 >AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC, isoform C protein. Length = 157 Score = 113 bits (272), Expect = 1e-25 Identities = 54/106 (50%), Positives = 72/106 (67%) Frame = +3 Query: 81 RMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGE 260 ++ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G Sbjct: 9 KLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGV 68 Query: 261 EFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEM 398 EF+E+ DG VKS+ T +GN L Q QK T VREF E+ Sbjct: 69 EFDEETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNEL 112 >BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p protein. Length = 117 Score = 108 bits (259), Expect = 4e-24 Identities = 53/109 (48%), Positives = 70/109 (64%) Frame = +3 Query: 120 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 299 + GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68 Query: 300 SVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 446 S+ T +GN L Q QK T VREF E+ +T +V C RVYK Sbjct: 69 SIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115 >BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p protein. Length = 117 Score = 108 bits (259), Expect = 4e-24 Identities = 53/109 (48%), Positives = 70/109 (64%) Frame = +3 Query: 120 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 299 + GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68 Query: 300 SVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 446 S+ T +GN L Q QK T VREF E+ +T +V C RVYK Sbjct: 69 SIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115 >AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA, isoform A protein. Length = 117 Score = 108 bits (259), Expect = 4e-24 Identities = 53/109 (48%), Positives = 70/109 (64%) Frame = +3 Query: 120 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 299 + GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68 Query: 300 SVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 446 S+ T +GN L Q QK T VREF E+ +T +V C RVYK Sbjct: 69 SIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115 >AY089569-1|AAL90307.1| 168|Drosophila melanogaster RE04580p protein. Length = 168 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -1 Query: 197 VTILTELHGRGDSVGGFAGDQTHADGLHELIKVL---GGSH 84 V +++E G G GG++G HA +++KV+ G SH Sbjct: 46 VKVISEEAGHGGWAGGYSGGYAHAPEEVKIVKVISEAGHSH 86 >AE014298-2796|AAF48913.1| 168|Drosophila melanogaster CG7406-PA protein. Length = 168 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -1 Query: 197 VTILTELHGRGDSVGGFAGDQTHADGLHELIKVL---GGSH 84 V +++E G G GG++G HA +++KV+ G SH Sbjct: 46 VKVISEEAGHGGWAGGYSGGYAHAPEEVKIVKVISEAGHSH 86 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,514,677 Number of Sequences: 53049 Number of extensions: 387227 Number of successful extensions: 1179 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1171 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1476622287 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -