BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1076 (666 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_0717 + 23834965-23835051,23836760-23836859,23837685-238377... 75 7e-14 09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 69 3e-12 11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 62 4e-10 12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 61 9e-10 01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 44 1e-04 05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14... 39 0.003 05_01_0488 - 4070506-4072277,4072455-4072557 31 1.1 02_05_0794 + 31789186-31789330,31789613-31789755 29 3.3 07_01_1192 - 11313934-11314221,11314296-11314413,11317220-11317371 28 5.8 >06_03_0717 + 23834965-23835051,23836760-23836859,23837685-23837770, 23837867-23837958,23838659-23838773,23838847-23839029 Length = 220 Score = 74.5 bits (175), Expect = 7e-14 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Frame = +3 Query: 144 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQL 320 T +I KL ET E+L KK+ L KK +LEV+ A+ KN YE+Q+ Sbjct: 19 TALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQI 78 Query: 321 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 500 Q+ +I Q LEGA + ++ +R A+AMK HK ++D V MD+I + Sbjct: 79 EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNM 138 Query: 501 DISREITEAIS 533 + R+I + +S Sbjct: 139 ENMRQIQDLLS 149 >09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816, 5043954-5044058,5044726-5044791,5044882-5044999, 5045018-5045103,5045900-5046424,5046534-5047115, 5047203-5047385,5049326-5049392,5049685-5049791, 5049977-5050076,5050228-5050313,5050394-5050485, 5050591-5050705,5050792-5050983 Length = 984 Score = 69.3 bits (162), Expect = 3e-12 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Frame = +3 Query: 159 IQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQLTQIDG 335 + KL ET ++L KK++ LEKK E++ A++ KN YE+Q+ Q+ Sbjct: 785 LDKLNETLDMLEKKEKVLEKKAAAELERAKEFSKAKNKRAAIQSLKRKKLYEQQIEQLGN 844 Query: 336 TLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISRE 515 +I Q LE A + ++ +R A AMK K ++D V MD+I EQ + ++ Sbjct: 845 FQLRIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQ 904 Query: 516 ITEAIS 533 I +A+S Sbjct: 905 IQDALS 910 >11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328, 1080435-1080520,1080957-1081056,1082180-1082210, 1082416-1082471 Length = 216 Score = 62.1 bits (144), Expect = 4e-10 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Frame = +3 Query: 174 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 350 ET E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++ Sbjct: 29 ETLEMLEKKECFLQKKASAEVEKAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 88 Query: 351 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 530 Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+ Sbjct: 89 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 148 Query: 531 SNNVAFPND 557 + + D Sbjct: 149 ATPIGASAD 157 >12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279, 1012384-1012469,1012989-1013088,1014139-1014333 Length = 251 Score = 60.9 bits (141), Expect = 9e-10 Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Frame = +3 Query: 174 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 350 +T E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++ Sbjct: 65 QTLEMLEKKECFLQKKASAEVERAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 124 Query: 351 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 530 Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+ Sbjct: 125 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 184 Query: 531 SNNVAFPND 557 + + D Sbjct: 185 ATPIGASAD 193 >01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-171469, 171578-171671,171770-171921,172004-172072 Length = 232 Score = 44.0 bits (99), Expect = 1e-04 Identities = 19/85 (22%), Positives = 42/85 (49%) Frame = +3 Query: 306 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 485 YE+Q + ++ A +G Q +N M+ A +K K + ++ + ++ D+ Sbjct: 75 YEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMMKTVKIEDIDNMQDE 134 Query: 486 IAEQHDISREITEAISNNVAFPNDI 560 + + D+S EI E++ + P+D+ Sbjct: 135 MTDLMDVSNEIQESLGRSYNIPDDV 159 >05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-144786, 145179-145327,145484-145510,145931-145981 Length = 274 Score = 39.1 bits (87), Expect = 0.003 Identities = 20/85 (23%), Positives = 38/85 (44%) Frame = +3 Query: 306 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 485 YE Q + ++ A EG Q + M+ A +K K + ++ + + D+ Sbjct: 108 YEGQRDMLYNQTYNLDQVAFASEGLKDAQQTMTAMKAANKELKGMMKTVKLEDIDSLQDE 167 Query: 486 IAEQHDISREITEAISNNVAFPNDI 560 + + D+S EI E + + P+DI Sbjct: 168 MMDLMDVSNEIQETLGRSYNVPDDI 192 >05_01_0488 - 4070506-4072277,4072455-4072557 Length = 624 Score = 30.7 bits (66), Expect = 1.1 Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 9/74 (12%) Frame = +3 Query: 315 QLTQIDGTLTQIEAQREALEGAN-TNAQVLNTMREA-ANAMK-----LAHKDIDVDKVHD 473 + + + L ++++++EALE N ++ ++E+ +A K LAH+D ++DK Sbjct: 229 ETSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKCKQ 288 Query: 474 IMDDIAEQ--HDIS 509 ++ ++E+ HDIS Sbjct: 289 ELEVLSEKYLHDIS 302 >02_05_0794 + 31789186-31789330,31789613-31789755 Length = 95 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +3 Query: 348 IEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVH 470 + + AL+ + A+ L ++R +NA LA + +D DK+H Sbjct: 1 MSVETAALQLSGEKARALTSIRRYSNAPILAAQRLDTDKIH 41 >07_01_1192 - 11313934-11314221,11314296-11314413,11317220-11317371 Length = 185 Score = 28.3 bits (60), Expect = 5.8 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 Query: 452 NVFVCELHGISCLAHSVQY 396 N+ CELH SCL H++Q+ Sbjct: 163 NLPACELHHFSCLLHTMQH 181 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,444,273 Number of Sequences: 37544 Number of extensions: 286288 Number of successful extensions: 744 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 742 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1679486824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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