Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1076
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069131-1|AAL39276.1|  226|Drosophila melanogaster GH13992p pro...   184   7e-47
AE013599-806|AAF58977.2|  226|Drosophila melanogaster CG8055-PA ...   184   7e-47
AE013599-3414|AAF46863.1|  212|Drosophila melanogaster CG4071-PA...    46   4e-05
AY071718-1|AAL49340.1|  111|Drosophila melanogaster RH31535p pro...    32   0.61 
AE013599-3415|AAM71106.1|  111|Drosophila melanogaster CG4071-PB...    32   0.61 
AE014297-3957|AAF56597.1| 1304|Drosophila melanogaster CG6490-PA...    32   0.81 
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   7.5  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   7.5  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    28   9.9  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    28   9.9  

>AY069131-1|AAL39276.1|  226|Drosophila melanogaster GH13992p
           protein.
          Length = 226

 Score =  184 bits (449), Expect = 7e-47
 Identities = 96/175 (54%), Positives = 117/175 (66%)
 Frame = +3

Query: 141 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQL 320
           PTT EAIQKLRETE +LIKKQEFLE KI+ E+  ARK+ +KN              EKQL
Sbjct: 16  PTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKRVALQALKKKKRLEKQL 75

Query: 321 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 500
            QIDGTL+ IE QREALE ANTN  VL TM+ AA+A+K AH+++DVDKVHD+MDDIAEQ 
Sbjct: 76  QQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDIAEQQ 135

Query: 501 DISREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVP 665
           D++REI++AISN VAF  D+                    ++GI  PT TLP+ P
Sbjct: 136 DVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEAP 190


>AE013599-806|AAF58977.2|  226|Drosophila melanogaster CG8055-PA
           protein.
          Length = 226

 Score =  184 bits (449), Expect = 7e-47
 Identities = 96/175 (54%), Positives = 117/175 (66%)
 Frame = +3

Query: 141 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQL 320
           PTT EAIQKLRETE +LIKKQEFLE KI+ E+  ARK+ +KN              EKQL
Sbjct: 16  PTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKRVALQALKKKKRLEKQL 75

Query: 321 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 500
            QIDGTL+ IE QREALE ANTN  VL TM+ AA+A+K AH+++DVDKVHD+MDDIAEQ 
Sbjct: 76  QQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDIAEQQ 135

Query: 501 DISREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVP 665
           D++REI++AISN VAF  D+                    ++GI  PT TLP+ P
Sbjct: 136 DVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEAP 190


>AE013599-3414|AAF46863.1|  212|Drosophila melanogaster CG4071-PA,
           isoform A protein.
          Length = 212

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
 Frame = +3

Query: 153 EAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQL-TQI 329
           +A+ +L++  + L + Q+ +E +++ +   ARK   +              Y++ L T  
Sbjct: 22  KAVLQLKQQRDRLKQYQKRIETQLENDRLLARKCLQQGRKDRAKLLLRKKKYQESLLTNA 81

Query: 330 DGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDIS 509
           D  L  +E     +E A    +VL+ ++    A+K  H+ +D+D+V  IMD+  E  +  
Sbjct: 82  DKQLENLEKLAADIEFAQVEMKVLDGLKAGNAALKKVHEMLDIDEVERIMDETREGIEKQ 141

Query: 510 REITEAISNNVAFPND 557
           +EI +AI  +V    D
Sbjct: 142 QEI-DAILTDVLTTQD 156


>AY071718-1|AAL49340.1|  111|Drosophila melanogaster RH31535p
           protein.
          Length = 111

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 393 QVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAISNNVAFPND 557
           +VL+ ++    A+K  H+ +D+D+V  IMD+  E  +  +EI +AI  +V    D
Sbjct: 2   KVLDGLKAGNAALKKVHEMLDIDEVERIMDETREGIEKQQEI-DAILTDVLTTQD 55


>AE013599-3415|AAM71106.1|  111|Drosophila melanogaster CG4071-PB,
           isoform B protein.
          Length = 111

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 393 QVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAISNNVAFPND 557
           +VL+ ++    A+K  H+ +D+D+V  IMD+  E  +  +EI +AI  +V    D
Sbjct: 2   KVLDGLKAGNAALKKVHEMLDIDEVERIMDETREGIEKQQEI-DAILTDVLTTQD 55


>AE014297-3957|AAF56597.1| 1304|Drosophila melanogaster CG6490-PA
           protein.
          Length = 1304

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 327 IDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDI 488
           + GTLT +E + + +    T  Q LN    A     + H+D  VD   ++ DDI
Sbjct: 612 LQGTLTSVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDI 665


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = +3

Query: 306  YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 485
            +EK L +++     ++    +          +  +RE +N +K +HK+I+      I+  
Sbjct: 7144 WEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEA-LSKSILTF 7202

Query: 486  IAEQHDISREITEA 527
            + E H  S E  +A
Sbjct: 7203 LGEVHKPSAEAIQA 7216


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = +3

Query: 306  YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 485
            +EK L +++     ++    +          +  +RE +N +K +HK+I+      I+  
Sbjct: 7144 WEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEA-LSKSILTF 7202

Query: 486  IAEQHDISREITEA 527
            + E H  S E  +A
Sbjct: 7203 LGEVHKPSAEAIQA 7216


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
           protein.
          Length = 5327

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
 Frame = +3

Query: 372 EGANTNAQVLNTMR--EAANAMKL----AHKDIDVDKVHDIMDDIAEQHDISREITEAIS 533
           +G  T++ +++T    EA  A KL    A +++D +K  ++ DD+ E+ ++ REI    S
Sbjct: 799 KGGTTDSSLVSTPSADEATAAKKLQDLTASQELDAEKQREL-DDLKEEQEVVREIEAVFS 857

Query: 534 NN 539
            +
Sbjct: 858 RD 859


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
 Frame = +3

Query: 372  EGANTNAQVLNTMR--EAANAMKL----AHKDIDVDKVHDIMDDIAEQHDISREITEAIS 533
            +G  T++ +++T    EA  A KL    A +++D +K  ++ DD+ E+ ++ REI    S
Sbjct: 846  KGGTTDSSLVSTPSADEATAAKKLQDLTASQELDAEKQREL-DDLKEEQEVVREIEAVFS 904

Query: 534  NN 539
             +
Sbjct: 905  RD 906


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,560,517
Number of Sequences: 53049
Number of extensions: 484096
Number of successful extensions: 1278
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)