Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1074
(503 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p pro... 159 1e-39
AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-P... 159 1e-39
AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p pro... 40 0.003
AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA... 40 0.003
AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p pro... 39 0.004
AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA... 39 0.004
BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 33 0.29
AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 33 0.29
BT010069-1|AAQ22538.1| 314|Drosophila melanogaster LD13050p pro... 30 1.5
AF253528-2|AAF71285.1| 314|Drosophila melanogaster proteolipid ... 30 1.5
AF253528-1|AAF71284.1| 248|Drosophila melanogaster proteolipid ... 30 1.5
AE014296-3552|AAN12170.1| 314|Drosophila melanogaster CG7540-PB... 30 1.5
AE014296-3551|AAF51736.1| 314|Drosophila melanogaster CG7540-PA... 30 1.5
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 29 2.7
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 29 2.7
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 29 2.7
AE013599-936|AAF58894.1| 256|Drosophila melanogaster CG12924-PA... 29 4.7
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 28 6.2
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 28 6.2
AE014296-2279|AAF49816.2| 297|Drosophila melanogaster CG10140-P... 28 6.2
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 28 6.2
L33341-1|AAA28445.1| 101|Drosophila melanogaster membrane-assoc... 28 8.3
AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p pro... 28 8.3
AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-P... 28 8.3
>BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p
protein.
Length = 94
Score = 159 bits (387), Expect = 1e-39
Identities = 70/87 (80%), Positives = 84/87 (96%)
Frame = +1
Query: 70 MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA 249
M++KG PKVQKVMVQPINLIFRYLQNRSRVQ+WLYEN++LRIEGHIVGFDEYMN+VLD+A
Sbjct: 1 MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDA 60
Query: 250 EEVHMKSKNRKQIGRIMMKGDNITLIQ 330
EEV++K++ R+ +GRIM+KGDNITLIQ
Sbjct: 61 EEVYVKTRQRRNLGRIMLKGDNITLIQ 87
>AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-PA
protein.
Length = 94
Score = 159 bits (387), Expect = 1e-39
Identities = 70/87 (80%), Positives = 84/87 (96%)
Frame = +1
Query: 70 MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA 249
M++KG PKVQKVMVQPINLIFRYLQNRSRVQ+WLYEN++LRIEGHIVGFDEYMN+VLD+A
Sbjct: 1 MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDA 60
Query: 250 EEVHMKSKNRKQIGRIMMKGDNITLIQ 330
EEV++K++ R+ +GRIM+KGDNITLIQ
Sbjct: 61 EEVYVKTRQRRNLGRIMLKGDNITLIQ 87
>AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p
protein.
Length = 76
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 133 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGD 312
+Y+ R +++ N + G + GFD +MN+VLD+ E K + IG ++++G+
Sbjct: 11 KYMDKRMMLKL----NGGRAVTGILRGFDPFMNVVLDDTVE-ECKDNTKNNIGMVVIRGN 65
Query: 313 NITLIQ 330
+I +++
Sbjct: 66 SIVMVE 71
>AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA
protein.
Length = 76
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 133 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGD 312
+Y+ R +++ N + G + GFD +MN+VLD+ E K + IG ++++G+
Sbjct: 11 KYMDKRMMLKL----NGGRAVTGILRGFDPFMNVVLDDTVE-ECKDNTKNNIGMVVIRGN 65
Query: 313 NITLIQ 330
+I +++
Sbjct: 66 SIVMVE 71
>AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p
protein.
Length = 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 85 PPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHM 264
PP + P+ L+ + + +R + + +N + + G ++GFD+++N++LD+ E
Sbjct: 5 PPPSNISTLMPLELVDKCIGSRIHI---IMKN-DKEMVGTLLGFDDFVNMLLDDVTEYEN 60
Query: 265 KSKNRK--QIGRIMMKGDNITLI 327
R+ ++ +I++ G+NIT++
Sbjct: 61 TPDGRRITKLDQILLNGNNITML 83
>AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA
protein.
Length = 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 85 PPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHM 264
PP + P+ L+ + + +R + + +N + + G ++GFD+++N++LD+ E
Sbjct: 5 PPPSNISTLMPLELVDKCIGSRIHI---IMKN-DKEMVGTLLGFDDFVNMLLDDVTEYEN 60
Query: 265 KSKNRK--QIGRIMMKGDNITLI 327
R+ ++ +I++ G+NIT++
Sbjct: 61 TPDGRRITKLDQILLNGNNITML 83
>BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p
protein.
Length = 95
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 199 GHIVGFDEYMNIVLDEA-EEVHMKSKNRKQI--GRIMMKGDNITLI 327
G + GFD+ +NI++DE E V + +QI G +++GDNI +I
Sbjct: 24 GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69
>AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA
protein.
Length = 95
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 199 GHIVGFDEYMNIVLDEA-EEVHMKSKNRKQI--GRIMMKGDNITLI 327
G + GFD+ +NI++DE E V + +QI G +++GDNI +I
Sbjct: 24 GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69
>BT010069-1|AAQ22538.1| 314|Drosophila melanogaster LD13050p
protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 105 HLLNFRWAFISHFLFVLTFVNEKLW 31
+LLNF W+ I FL V+TF+ W
Sbjct: 180 YLLNFVWSLILCFLVVVTFIYTMFW 204
>AF253528-2|AAF71285.1| 314|Drosophila melanogaster proteolipid
protein M6-2 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 105 HLLNFRWAFISHFLFVLTFVNEKLW 31
+LLNF W+ I FL V+TF+ W
Sbjct: 180 YLLNFVWSLILCFLVVVTFIYTMFW 204
>AF253528-1|AAF71284.1| 248|Drosophila melanogaster proteolipid
protein M6-1 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 105 HLLNFRWAFISHFLFVLTFVNEKLW 31
+LLNF W+ I FL V+TF+ W
Sbjct: 114 YLLNFVWSLILCFLVVVTFIYTMFW 138
>AE014296-3552|AAN12170.1| 314|Drosophila melanogaster CG7540-PB,
isoform B protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 105 HLLNFRWAFISHFLFVLTFVNEKLW 31
+LLNF W+ I FL V+TF+ W
Sbjct: 180 YLLNFVWSLILCFLVVVTFIYTMFW 204
>AE014296-3551|AAF51736.1| 314|Drosophila melanogaster CG7540-PA,
isoform A protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 105 HLLNFRWAFISHFLFVLTFVNEKLW 31
+LLNF W+ I FL V+TF+ W
Sbjct: 180 YLLNFVWSLILCFLVVVTFIYTMFW 204
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
Frame = +1
Query: 199 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 318
G FD++MN++L + EE ++SKN ++ +G ++++G+NI
Sbjct: 29 GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
Frame = +1
Query: 199 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 318
G FD++MN++L + EE ++SKN ++ +G ++++G+NI
Sbjct: 29 GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
Frame = +1
Query: 199 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 318
G FD++MN++L + EE ++SKN ++ +G ++++G+NI
Sbjct: 29 GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>AE013599-936|AAF58894.1| 256|Drosophila melanogaster CG12924-PA
protein.
Length = 256
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 46 HESQYKQKMAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEY 225
H + + A GP ++ + P + + R RV I + +V +EG ++ FD+
Sbjct: 117 HRNIFTYMEAAVGPLELLTKCISPASHNESNERRRVRVVIRKHGSVGGSVEGELLAFDKQ 176
Query: 226 MNIVLDEAEEVHMKSK 273
N++L E + K
Sbjct: 177 WNLLLRNVTETWKRRK 192
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 51 KSIQTKNGL*RPTESSEGDGTAHQPYLPIPTEPESCANL 167
+++Q +NGL R T S +A+ L PTE C L
Sbjct: 2 ENVQLENGLERRTTSQSSTSSANPANLASPTEECGCVRL 40
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 51 KSIQTKNGL*RPTESSEGDGTAHQPYLPIPTEPESCANL 167
+++Q +NGL R T S +A+ L PTE C L
Sbjct: 2 ENVQLENGLERRTTSQSSTSSANPANLASPTEECGCVRL 40
>AE014296-2279|AAF49816.2| 297|Drosophila melanogaster CG10140-PA
protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 212 PTMCPSILRFTFSYSQICTRLRFCRYRKIRLMGC 111
PT C + TFSY + CTR C Y K L C
Sbjct: 109 PT-CEAFNFSTFSYQRTCTRYVLCYYGKPVLRQC 141
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 51 KSIQTKNGL*RPTESSEGDGTAHQPYLPIPTEPESCANL 167
+++Q +NGL R T S +A+ L PTE C L
Sbjct: 2 ENVQLENGLERRTTSQSSTSSANPANLASPTEECGCVRL 40
>L33341-1|AAA28445.1| 101|Drosophila melanogaster
membrane-associated protein protein.
Length = 101
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 196 EGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGDNITLIQ 330
+G +V D YMN+ L EEV ++ +G ++++ +N+ I+
Sbjct: 32 KGFLVSVDGYMNMQLANTEEV-IEGSVTGNLGEVLIRCNNVLYIK 75
>AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p
protein.
Length = 88
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 196 EGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGDNITLIQ 330
+G +V D YMN+ L EEV ++ +G ++++ +N+ I+
Sbjct: 32 KGFLVSVDGYMNMQLANTEEV-IEGSVTGNLGEVLIRCNNVLYIK 75
>AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-PA
protein.
Length = 88
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 196 EGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGDNITLIQ 330
+G +V D YMN+ L EEV ++ +G ++++ +N+ I+
Sbjct: 32 KGFLVSVDGYMNMQLANTEEV-IEGSVTGNLGEVLIRCNNVLYIK 75
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,636,830
Number of Sequences: 53049
Number of extensions: 416120
Number of successful extensions: 1233
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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