BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1074 (503 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 1.8 AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 2.4 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.2 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.5 AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 7.3 AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 7.3 AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.6 AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.6 >L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. Length = 150 Score = 23.0 bits (47), Expect = 1.8 Identities = 8/34 (23%), Positives = 18/34 (52%) Frame = +2 Query: 53 VNTNKKWLIKAHRKFRR*WYSPSTLSSDTYRTGV 154 + ++KW++ + K +R W P + T + G+ Sbjct: 29 ITGDEKWVVYNNIKRKRSWSRPRESAQTTSKAGI 62 >AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase protein. Length = 342 Score = 22.6 bits (46), Expect = 2.4 Identities = 8/34 (23%), Positives = 18/34 (52%) Frame = +2 Query: 53 VNTNKKWLIKAHRKFRR*WYSPSTLSSDTYRTGV 154 + ++KW++ + K +R W P + T + G+ Sbjct: 150 ITGDEKWVVYNNIKRKRSWSRPREPAQTTSKAGI 183 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 22.2 bits (45), Expect = 3.2 Identities = 10/33 (30%), Positives = 13/33 (39%) Frame = +3 Query: 228 EYCSRRS*RSPYEIEKQKTNRKNNDEGRQHNTH 326 E C R S S TN NN+ +N + Sbjct: 217 ETCQRNSNNSTITAGNANTNASNNNNNNNNNNN 249 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.4 bits (43), Expect = 5.5 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%) Frame = +3 Query: 42 HSRKSIQT---KNGL*RPTESSEGDGTAHQPYLPIPTEPESCA 161 HSR Q+ +NG S G H + P +P +CA Sbjct: 1772 HSRSGSQSMPRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCA 1814 >AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.0 bits (42), Expect = 7.3 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 155 RLRFCRYRKIRLMG 114 R ++CRY+K MG Sbjct: 161 RCQYCRYQKCLAMG 174 >AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.0 bits (42), Expect = 7.3 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 155 RLRFCRYRKIRLMG 114 R ++CRY+K MG Sbjct: 161 RCQYCRYQKCLAMG 174 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 20.6 bits (41), Expect = 9.6 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 470 LEIEKTSNPVTVI 432 L IE TSN +TVI Sbjct: 116 LNIESTSNKMTVI 128 >AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. Length = 226 Score = 20.6 bits (41), Expect = 9.6 Identities = 9/21 (42%), Positives = 10/21 (47%) Frame = -1 Query: 260 WTSSASSRTIFMYSSKPTMCP 198 W S + F YSSKP P Sbjct: 205 WWSXXTVAXTFKYSSKPYXFP 225 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 134,054 Number of Sequences: 438 Number of extensions: 2853 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 13864083 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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