Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1073
(645 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.93
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 23 2.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.8
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 5.0
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 22 5.0
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 6.6
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 21 8.7
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 8.7
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.7
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 8.7
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 8.7
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.2 bits (50), Expect = 0.93
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 477 CAPGSSWSNQCNSC 518
CAPG W N N C
Sbjct: 1307 CAPGLHWDNNKNIC 1320
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 594 CAPKTMWKNECNTC 635
CAP W N N C
Sbjct: 1307 CAPGLHWDNNKNIC 1320
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 41 NEVFDCNLFYRFGATLRKWSPKM 109
N DC+ FGA L+K PK+
Sbjct: 644 NSTVDCDDVGTFGAILKKLLPKV 666
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +3
Query: 153 KDKPSQITTDDASAVQEMQSEVECLAGTEW 242
K+ PSQ + +A +++Q +C+ G ++
Sbjct: 450 KNMPSQYIHEPWTAPEQVQRAAKCIIGKDY 479
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 342 CQPGTSFQRDCNTC 383
C+PGT F N C
Sbjct: 504 CRPGTVFHTQSNIC 517
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +3
Query: 174 TTDDASAVQEMQSEVECLAGTEWESNCHFCR 266
T ++ S++ E ++ EC+ + + C CR
Sbjct: 32 TYNNISSISECKNNGECVINKKNRTACKACR 62
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 282 VAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNT 380
VA+ L+ ++ +Q + E + PG Q+ C+T
Sbjct: 755 VAQYLQIENVEQTLNHEIKKVIPGRITQKSCST 787
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 21.0 bits (42), Expect = 8.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 544 MPYPSALHLQLLHWFDHDDPGAHSLPWISSNFLGVDD 434
+ + A L LLH D PG +S +S + + DD
Sbjct: 178 LEFKGAQDLSLLHVSDSLSPGIYSEQSLSPDTVFGDD 214
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 633 TCCIHFSTSSSAHILSLAR*CVQ 565
T C S ++ HILS+ C Q
Sbjct: 315 TICTIMSAAAVEHILSIVNTCSQ 337
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 185 VICCYLTRFVF*FLLCCTWAFCARTAF 105
++C Y FLLC + +CA F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIF 156
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 550 LQMPYPSALHLQLL 509
+Q+P+P+A H LL
Sbjct: 117 MQLPHPAAAHSALL 130
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.0 bits (42), Expect = 8.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 489 IPERILCPGSAQTSWELTIFYRHPRSIGPDRYLSRRKC 376
+P L SAQT EL + + S+ L+R KC
Sbjct: 358 LPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKC 395
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,822
Number of Sequences: 336
Number of extensions: 3902
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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