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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1073
         (645 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)                   34   0.086
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.086
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)                     33   0.26 
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)                       32   0.35 
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)             32   0.35 
SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17)               32   0.46 
SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35)                      31   0.61 
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)                   31   0.80 
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)               31   0.80 
SB_45116| Best HMM Match : EGF (HMM E-Value=0)                         31   0.80 
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)                31   0.80 
SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)                31   0.80 
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)                  31   0.80 
SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_16910| Best HMM Match : EGF (HMM E-Value=0)                         30   1.9  
SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0)                    29   3.2  
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)                   29   4.3  
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)           29   4.3  
SB_2169| Best HMM Match : EGF_CA (HMM E-Value=6.4e-33)                 29   4.3  
SB_35754| Best HMM Match : DUF755 (HMM E-Value=2.4)                    29   4.3  
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)             29   4.3  
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)                    28   5.7  
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)                28   5.7  
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)                   28   5.7  
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)                      28   5.7  
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)                   28   5.7  
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)                28   7.5  
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          28   7.5  
SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25)                27   9.9  
SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31)                   27   9.9  
SB_11378| Best HMM Match : Strep_SA_rep (HMM E-Value=2)                27   9.9  
SB_57083| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  

>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
          Length = 705

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +3

Query: 216 VECLAGTEWESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNTCVCLD 395
           + C+ G E +      R +  G  +C+++  C  I   +  +  PG    +DC  CVC D
Sbjct: 209 MRCVEGCECKEE-FVQRVNAVGKVQCIKRKECPCIHDAKIYK--PGDKVYKDCQLCVCKD 265

Query: 396 NGLGLCSLDAC 428
             L  C+   C
Sbjct: 266 GQLTNCTGQKC 276


>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3261

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 21/195 (10%)
 Frame = +3

Query: 81   RHCESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEM---QSEVECLAGTEWESN 251
            R C +  + C  G    C        KP+Q+ T    ++ E+     ++ C+   E + N
Sbjct: 952  RDCPNNFMCCDSGCYKQCV-------KPNQVFTMPPFSICEVPMRSGQIYCVC-PECD-N 1002

Query: 252  CHFCRCSDSGVA---EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGLGL 410
                 C++ G     EC +RQD+C    +T P+ C P ++F  D    +TC   D+    
Sbjct: 1003 TESPVCTNDGKKFPNECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQPTC 1062

Query: 411  CSLDACRRSSTPKKFELIQGRECAPGSSWSNQC----NSCRCNA-------DGYGICSDE 557
              ++ C     PK  + + G +     ++ N+C     +C+ N          Y  C D 
Sbjct: 1063 VCVEPC-----PKTLKPVYGTD---NKNYDNECLLKLAACKSNTRILIAGFGRYNPCKDV 1114

Query: 558  ACTEHIIEPKKECAP 602
             CT     P   C P
Sbjct: 1115 NCTS---PPYSSCRP 1126


>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 320

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 15/120 (12%)
 Frame = +3

Query: 288 EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGLGLCSLDACRRSSTPKKF 455
           EC +RQD+C    +T P+ C P ++F  D    +TC   D+      ++ C     PK  
Sbjct: 44  ECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQPTCVCVEPC-----PKTL 98

Query: 456 ELIQGRECAPGSSWSNQC----NSCRCNA-------DGYGICSDEACTEHIIEPKKECAP 602
           + + G +     ++ N+C     +C+ N          Y  C D  CT     P   C P
Sbjct: 99  KPVYGTD---NKNYDNECLLKLAACKSNTRILIAGFGRYNPCKDVNCTS---PPYSSCRP 152


>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
          Length = 960

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
 Frame = +3

Query: 240 WESNC-HFCRCSDSG-----VAECLRQDSCD-QIIFTEPVRCQPG--TSFQRDC-NTCVC 389
           W  NC H C C++         +C   D C     +T P    P    S+   C NTC C
Sbjct: 362 WGHNCAHPCNCTNGARCNAVTGQCACTDGCSCNAGWTGPECRDPCGLDSWGPGCTNTCQC 421

Query: 390 LDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADGYGIC 548
             NG   C   + R +  P          C  G   +N  N+C C A    +C
Sbjct: 422 SRNGE--CDAASGRCACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTNVC 472


>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
          Length = 1215

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = +3

Query: 111  SPGTEGPCAAEQE---SKDKPSQITTDDASAVQE-MQSEVECLAGTEWESNCHFCRCSDS 278
            +P   GPC+A          P+Q  T      ++   SE EC  GT ++S+    +C   
Sbjct: 784  NPAPTGPCSAGYYCTGGAKTPTQFVTSAGHYSEKGAASETECPVGT-YQSSDRASKC--- 839

Query: 279  GVAECLRQDSCDQIIFTEPVRCQPG 353
                CL ++ CD++    P+ C  G
Sbjct: 840  --IPCLEKNYCDRMGLINPIPCPTG 862


>SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17)
          Length = 738

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
 Frame = +3

Query: 336 VRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPG-----SSWS 500
           V+C PG SF    ++  C       C++      +     + + G +C+PG     S   
Sbjct: 211 VKCAPGKSFSESIDSSSC--KPCSKCAVGQMVERACNSTHDTLCG-DCSPGFYRDFSVHP 267

Query: 501 NQCNSCR-CNADGYGICSDEACTEHIIEPKKECA 599
             C  C  C  D   +   E CT   + PKK+C+
Sbjct: 268 AVCGQCSYCCGDDIDVIEKE-CTAQGMPPKKQCS 300


>SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35)
          Length = 684

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +3

Query: 369 DCNTCVCLDNGLGLCSLD--ACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRC 524
           +C  C C+D G+  C      CR  S      L  G   A GS   + CN+C C
Sbjct: 629 ECRLCQCVD-GVMKCEPRPVGCRVDSQDNMCHLENGEAYAEGSKHFDGCNNCIC 681


>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
          Length = 2160

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 121  QKAHVQQSKNQKTNRVR*QQMTRLPSKKCSRKWNAWREPSGRATATSA 264
            Q+   QQ + Q   + + QQ  RLP    +++ N + +P G A  TSA
Sbjct: 1611 QQLQHQQQQQQLQQQQQLQQQQRLPQHHLTQQQNPFYQPPGTAPVTSA 1658


>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
          Length = 814

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 121 QKAHVQQSKNQKTNRVR*QQMTRLPSKKCSRKWNAWREPSGRATATSA 264
           Q+   QQ + Q   + + QQ  RLP    +++ N + +P G A  TSA
Sbjct: 265 QQLQHQQQQQQLQQQQQLQQQQRLPQHHLTQQQNPFYQPPGTAPVTSA 312


>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2023

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
 Frame = +3

Query: 87   CESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWESNCHFCR 266
            CE    +C      PCA      D+ +  +    S    +Q    C  GT    N     
Sbjct: 1018 CEIDINECD---SNPCANGGTCADQVNSFSCTCVSGYTGLQ----CKTGTVLRYNEKAVD 1070

Query: 267  CSDSGVAECLRQDSCDQIIFTEPVRCQP---GTSFQRDCNTCV---CLDNGLGLCSLD-- 422
             ++     CL   +C+ ++     +CQP   GT+ + D N C    C++ G     ++  
Sbjct: 1071 INECASNPCLNGGTCNDLVNGYNCKCQPGYNGTTCEIDINECASNQCVNGGTCTDLVNGF 1130

Query: 423  --ACRRSSTPKKFEL----IQGRECAPGSSWSNQCNSCRCN-ADGY 539
               C       K E+     +   C  G + ++Q NS  C    GY
Sbjct: 1131 NCTCPPGYNGTKCEININECENNPCVNGGTCADQVNSFSCTCVSGY 1176


>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
          Length = 622

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 20/106 (18%)
 Frame = +3

Query: 372 CNTCVCLDNGLGLCSLD-AC------RRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNA 530
           C    C+  GL LC  D AC      +  S P    L    EC P ++  N  N C  NA
Sbjct: 190 CENGQCVKRGL-LCDGDKACLDGSDEKHCSCPSNMFLCPSGECIPTTALCNNENDCSDNA 248

Query: 531 D----GYGICS--DEACTEHI-----IEPKKECAP--KTMWKNECN 629
           D     Y  CS  +  C  +I      E +++C P   T   NEC+
Sbjct: 249 DERNCQYANCSLNNLGCRRNIDITQVNEEERKCKPLLSTYVDNECH 294


>SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)
          Length = 338

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 252 CHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPG-TSFQRDCNTCVCLDNGLGLCSLDAC 428
           CH   CS SG+  C +  SC   I +    C+PG T    +C  C  +    G  S  A 
Sbjct: 215 CHIDECS-SGINNCHQDASCANTIGSFACTCKPGYTGDGINCADC-AMGMESGAISDSAI 272

Query: 429 RRSSTPKKFELIQGR 473
             SS  +K     GR
Sbjct: 273 TASSYLEKLRPSNGR 287


>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
          Length = 683

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
 Frame = +3

Query: 219 ECLAGTEWESN---CHFCRCSDSGVAECL-----RQDSC-DQIIFTEPVRCQPGT-SF-Q 365
           +C+ GT   +    C  C C+ +G +  L      Q SC + ++  +  RC+  +  F  
Sbjct: 136 KCVTGTYGNATAQQCKACDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGP 195

Query: 366 RDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSW-----SNQCNSCRCNA 530
             C  C C  N  G  SL        P   E+I G +CA   +         C +C CN 
Sbjct: 196 AGCTECAC--NVHGSASLQCDDSGVCPCNLEVI-GTKCAQCKTGYFGLPKMTCKACDCNV 252

Query: 531 DG 536
           DG
Sbjct: 253 DG 254


>SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 680

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 622 SFFHIVFGAHSFFGSIMCSVQASSLQMPYPSALHLQLLHWFD-HDDPGAHSLPWISSNFL 446
           SF H+ F  HS   S M  V  S L++      H   LHW D H   G++       N  
Sbjct: 235 SFMHLAFLHHSMLSSDMTMVLPSHLEV--TQGCHHTTLHWDDTHGVTGSYKKVHPQQNLQ 292

Query: 445 GVD 437
           G++
Sbjct: 293 GMN 295


>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 487

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 9/149 (6%)
 Frame = +3

Query: 183 DASAVQEMQSEVECLAGTEWE-SNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS 359
           D    Q+++S    + G  W+  +C  C C  +G  EC  Q  C   +   P++ + G  
Sbjct: 339 DQPVCQDVKSGELYVIGQSWKPDDCSTCFCKKNGKVECAHQ-MCGYPVCANPIK-ETG-- 394

Query: 360 FQRDCNTC--VCLDNGLGLCSLDAC-RRSSTPKKFELIQGRECAPGSSW-SNQCNSCRCN 527
               C  C    +D G G    D      S P   + + G        W  + C +C C 
Sbjct: 395 --HCCPICRDEIVDEGRGEDGGDVVDDPHSCP---DPVTGDYYHRFEMWQQDDCTACICG 449

Query: 528 ADGYGICSDEAC----TEHIIEPKKECAP 602
           +D    C+ + C     ++ +  K  C P
Sbjct: 450 SDRKLQCTKKTCPKLLCDNPVHNKGRCCP 478


>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1552

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
 Frame = +3

Query: 354  TSFQRDCNTCVCLDNGLG----LCSLDACRRSSTPKKFELIQGRECAP 485
            T+ + DCNTC C+         +C  D C  SST        G  C P
Sbjct: 1195 TTVKEDCNTCSCVHGTRTCTKVVCGPDNCLNSSTVSNDICSMGSVCVP 1242


>SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0)
          Length = 561

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 8/159 (5%)
 Frame = +3

Query: 60  ICFIVLARHCESGALKCSPGTEGPCAAE------QESKDKPSQITTDDASAVQEMQSEVE 221
           +C   L R+ ++GA+     T      E      Q  K  PS+I     S    +  +  
Sbjct: 277 LCLHFLRRNSKAGAVGAEEHTMAKYLMELTLIDYQSIKFLPSEIAAASLSLAMRVMGK-- 334

Query: 222 CLAGTEWESNC-HFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNTCVC-LD 395
              G+EW     H+   S+  ++ C+ Q     ++     + +  T   + C++C     
Sbjct: 335 ---GSEWTPTLEHYSGYSEKKLSTCM-QRLAQLVLGARDSKQKDSTGRIQMCSSCFGDTK 390

Query: 396 NGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCN 512
               LC +  C + S P+  E + G +     ++   CN
Sbjct: 391 YQCILCEMPFCNKCSFPELDENVAGWKAGKSVAYCKCCN 429


>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 344

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 351 GTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELI-QGRE 476
           G     DCN+CVC   G  +C+   C  SS   K  L+ QG +
Sbjct: 256 GAEIPTDCNSCVCA-CGRWVCTALDCNPSSNHVKASLVLQGEQ 297


>SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)
          Length = 218

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
 Frame = +3

Query: 507 CNSCRCNADGYGICS---------DEACTEHIIEPKKECAP 602
           C  C CN+     CS         D AC ++++EP K+C P
Sbjct: 104 CQKCECNSGKASSCSIGYHCDALLDGACEKYVLEP-KQCCP 143


>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
          Length = 1207

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/78 (24%), Positives = 32/78 (41%)
 Frame = +3

Query: 333 PVRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCN 512
           PV C  G ++   C+ C    +    C +    R  T    E++ G +    S +  +C 
Sbjct: 772 PVACACGKTW---CSECQEETHWPAKCEIAQRFRKQTKAYQEILNGMDNRIKSVFVKRCP 828

Query: 513 SCRCNADGYGICSDEACT 566
           +CR   +  G C   +CT
Sbjct: 829 ACRYPVEKNGGCPHMSCT 846


>SB_2169| Best HMM Match : EGF_CA (HMM E-Value=6.4e-33)
          Length = 133

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
 Frame = +3

Query: 87  CESGALKCSPGTE---GPCAAEQESKDKPSQITTDDASAVQEMQSE---VECLAGTEWE- 245
           C++ A+KCS G E   G C    E     ++  +  +    E       + C  G E+  
Sbjct: 27  CQASAIKCSRGYEPQNGRCVDVDECSSGLARCPSGQSCVNTEGSYSCLPIGCSPGFEFRG 86

Query: 246 SNCHFCRCSDSGVAECLRQDSCDQIIFT-EPVRCQPGTSF 362
             C       SG+A C R+  C+ +      V C+ G  F
Sbjct: 87  GKCQDIDECASGIARCGREQFCENVEGAYRCVTCRTGYRF 126


>SB_35754| Best HMM Match : DUF755 (HMM E-Value=2.4)
          Length = 604

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 315 DHSCPASSTRRLLNQSTCRSGSCSPTRFPPGIP 217
           D  C +S  RRL  +ST  +   S    PPG P
Sbjct: 498 DDECLSSVARRLSTESTASTTDSSVASLPPGTP 530


>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
          Length = 198

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = +3

Query: 348 PGTSFQRD--CNTCVCLDNGLGLCSLDACRRSSTPKKFELIQ-GRECAPGSSWSNQCNSC 518
           PG  F  +    +CV   +GL  C+   C  S   ++ E  Q G    P    + QC  C
Sbjct: 21  PGGPFSANSFARSCVLGSDGLPTCT--NCSESHAGRQCERCQDGYYGTPTDPVNGQCRKC 78

Query: 519 RCNAD 533
            CN +
Sbjct: 79  NCNGN 83


>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
          Length = 203

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 384 VCLDNGLGLC-SLDACRRS-STPKKFELIQGRECAPGSSWSNQCNSCRCN 527
           VC+   L L  SL  C RS    ++++L Q R C   S W  Q     C+
Sbjct: 112 VCVLGALPLPRSLTRCARSFGCGERYQLTQRRACPSSSRWPRQAYQSTCD 161


>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
          Length = 850

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
 Frame = +3

Query: 288 EC-LRQDSCDQI----IFTEPVRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKK 452
           EC +R+ +CDQ+    I +    C  G + + D  TC  +D  L    L   R ++TP  
Sbjct: 248 ECEIRKHTCDQVCVNTIGSFRCGCNVGYTLRNDSKTCSDIDECLDDAHLCDQRCTNTPGS 307

Query: 453 FELIQGRECAPGSSWSNQCNSC----RCNADGYGICSDEACTEHIIEPKKECAPKTMWKN 620
           +       C  G S S+   +C     C    +G CS + C   +      C       N
Sbjct: 308 YAC----GCYHGYSLSSDMKTCIDIDECTMTSHG-CS-QLCNNTLGGYNCYCLSGYSLGN 361

Query: 621 ECNTC 635
           +  TC
Sbjct: 362 DNRTC 366


>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
          Length = 300

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
 Frame = +3

Query: 213 EVECLAGTEWESNCHFCRCSDSGVAECLRQDSCDQI----IFTEPVRCQPGTSFQRDCNT 380
           +  C +G   +  C      DSG  +C +  +C +      FT    CQ G  +  DC  
Sbjct: 160 QCNCTSGFTGD-RCEKQCAGDSGGVDCRQHCNCTEWGTCNPFTGKCLCQSGF-YGEDCGA 217

Query: 381 CVCLDNGLG-LCSLDA-CRRSSTPKKFE-LIQGR--------ECAPGSSWSNQC-NSCRC 524
             C D   G  C+    C++++T  K +   Q +        EC+PG  + N+C  +C C
Sbjct: 218 -ECPDGTYGPACTAHCKCQKNATCDKIDGTCQCKPGWTGIDCECSPGK-YGNKCEKTCSC 275

Query: 525 N 527
           N
Sbjct: 276 N 276


>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 2411

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +3

Query: 486  GSSWSNQC----NSC----RCNADGYGICSDEACTEHIIEPKKECAPKTMWKNECN 629
            G +++N+C    +SC      +    G C  +AC+ H+ E  ++C  KT +++EC+
Sbjct: 973  GKTYTNECLLKVDSCAEQKEISVKHKGAC--DACSNHVCEENEDCDKKT-YQSECH 1025


>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
          Length = 587

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 6/144 (4%)
 Frame = +3

Query: 222 CLAGTEWESNCHFCRCSDSGVA--ECLRQDSCDQIIFTEPVRCQPGTSF----QRDCNTC 383
           C+A      NC  C CS  G    +C     C         +C    S+      +C  C
Sbjct: 374 CMASYTGFPNCRKCECSPVGSVSPDCDVTGHCTCTRGFGGRKCDRCASYGYYGYPNCKAC 433

Query: 384 VCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADGYGICSDEAC 563
            C   G       +  +      FE ++  +C  G     +C  C CN  G  +   +  
Sbjct: 434 NCDTRGSLSTFCGSWGQCQCRMNFEGLKCDQCRVGYYDFPRCKQCGCNPAGIRLLPGQQN 493

Query: 564 TEHIIEPKKECAPKTMWKNECNTC 635
           T       K    + +   EC  C
Sbjct: 494 TCGNGNDTKCTCKENVQGAECEQC 517


>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
          Length = 3809

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 292 HSATPESEHLQKWQLLSHSVPARHSTSDCISWTAD 188
           H  TPE E  +   L     P +  + +CISW+ +
Sbjct: 400 HEKTPEMEFAEHGTLKEDVCPGKVYSDECISWSKE 434


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/68 (25%), Positives = 27/68 (39%)
 Frame = +3

Query: 357  SFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADG 536
            +F+++  T V +DNG G C        S    F  I GR       W +  +  R   + 
Sbjct: 2088 AFEQNGGTVVVIDNGSGFCKAGLSTDESPRVVFPAIVGR--PRHKMWEHAFDQLRVRGED 2145

Query: 537  YGICSDEA 560
            + +   EA
Sbjct: 2146 FPVLLTEA 2153


>SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2028

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = +3

Query: 96  GALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWESNCHFCRCSD 275
           G  + S G +    A  +++ +   ++  +  A++E   +  CL G + +     C C D
Sbjct: 12  GTRQASIGQDLGALAYDDTQTETLDLSDVEVLAIEETMCDPPCLRGEQCDEELGVCVCDD 71

Query: 276 S 278
           S
Sbjct: 72  S 72


>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4527

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = +3

Query: 477 CAP-GSSWSNQCNS--CRCNADGYGICSDEACTEHIIEPKK---ECAP 602
           CAP GSS +N   S  C CNA GY     E C E I E       CAP
Sbjct: 604 CAPIGSSCTNNAGSYTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 649


>SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25)
          Length = 86

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = +3

Query: 477 CAP-GSSWSNQCNS--CRCNADGYGICSDEACTEHIIEPKK---ECAP 602
           CAP GSS +N   S  C CNA GY     E C E I E       CAP
Sbjct: 12  CAPIGSSCTNNAGSFTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 57


>SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31)
          Length = 996

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
 Frame = +3

Query: 240  WESNCHFCRC--SDSGVAECLR-----QDSCDQIIFTEPVRCQPGTSF-QRDCNTCVCLD 395
            WE N   C+C  +D+   +C         SC  +    P  C  G  + QR C  CVC  
Sbjct: 814  WEPNNCLCKCRYADTQPKKCPEGHRWSASSCSCMCDKAPEVCPVGKYWSQRSCG-CVCSA 872

Query: 396  NGLGLCS 416
            + +G C+
Sbjct: 873  HVVGACN 879


>SB_11378| Best HMM Match : Strep_SA_rep (HMM E-Value=2)
          Length = 319

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 123 EGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEW-ESNCHFCRCSDSGVAECLR 299
           E P  AE+E  DK  +    D    Q+ + +   LA  +W ++ C        GVA   +
Sbjct: 68  ESPALAEKERHDKALEKYQRDYGRYQQRRQKNPRLASAKWLQTGCGVLCTYVEGVAAAAK 127

Query: 300 QD 305
           +D
Sbjct: 128 RD 129


>SB_57083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 134

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 499 RTSVTVVGAMPMDTAFVVTKPALN-TLSSQRKNVRRRRCG 615
           +TS T+V   P D+  +++K A+N  ++  +K ++ +R G
Sbjct: 19  KTSRTIVFPYPTDSTLLISKAAVNAAVTMFKKGIKYKRAG 58


>SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 555

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 631 VLHSFFHIVFGAHSFFGSIMCSVQASSLQMPYPSALHL-QLLHW 503
           V H+ FHI    HSF       V  S L  P  S +H+ Q++H+
Sbjct: 458 VTHTSFHISSRTHSFTYRHARIVSHSELNYPKTSVVHVDQIVHF 501


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,517,608
Number of Sequences: 59808
Number of extensions: 578333
Number of successful extensions: 1984
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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