BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1073 (645 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 34 0.086 SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.086 SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.26 SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 32 0.35 SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 32 0.35 SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17) 32 0.46 SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35) 31 0.61 SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 31 0.80 SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 31 0.80 SB_45116| Best HMM Match : EGF (HMM E-Value=0) 31 0.80 SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 31 0.80 SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14) 31 0.80 SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 0.80 SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_16910| Best HMM Match : EGF (HMM E-Value=0) 30 1.9 SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0) 29 3.2 SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) 29 4.3 SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 29 4.3 SB_2169| Best HMM Match : EGF_CA (HMM E-Value=6.4e-33) 29 4.3 SB_35754| Best HMM Match : DUF755 (HMM E-Value=2.4) 29 4.3 SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 29 4.3 SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) 28 5.7 SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 28 5.7 SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 28 5.7 SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.7 SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 5.7 SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 28 7.5 SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 7.5 SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5 SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25) 27 9.9 SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31) 27 9.9 SB_11378| Best HMM Match : Strep_SA_rep (HMM E-Value=2) 27 9.9 SB_57083| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 >SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) Length = 705 Score = 34.3 bits (75), Expect = 0.086 Identities = 19/71 (26%), Positives = 31/71 (43%) Frame = +3 Query: 216 VECLAGTEWESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNTCVCLD 395 + C+ G E + R + G +C+++ C I + + PG +DC CVC D Sbjct: 209 MRCVEGCECKEE-FVQRVNAVGKVQCIKRKECPCIHDAKIYK--PGDKVYKDCQLCVCKD 265 Query: 396 NGLGLCSLDAC 428 L C+ C Sbjct: 266 GQLTNCTGQKC 276 >SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3261 Score = 34.3 bits (75), Expect = 0.086 Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 21/195 (10%) Frame = +3 Query: 81 RHCESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEM---QSEVECLAGTEWESN 251 R C + + C G C KP+Q+ T ++ E+ ++ C+ E + N Sbjct: 952 RDCPNNFMCCDSGCYKQCV-------KPNQVFTMPPFSICEVPMRSGQIYCVC-PECD-N 1002 Query: 252 CHFCRCSDSGVA---EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGLGL 410 C++ G EC +RQD+C +T P+ C P ++F D +TC D+ Sbjct: 1003 TESPVCTNDGKKFPNECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQPTC 1062 Query: 411 CSLDACRRSSTPKKFELIQGRECAPGSSWSNQC----NSCRCNA-------DGYGICSDE 557 ++ C PK + + G + ++ N+C +C+ N Y C D Sbjct: 1063 VCVEPC-----PKTLKPVYGTD---NKNYDNECLLKLAACKSNTRILIAGFGRYNPCKDV 1114 Query: 558 ACTEHIIEPKKECAP 602 CT P C P Sbjct: 1115 NCTS---PPYSSCRP 1126 >SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 320 Score = 32.7 bits (71), Expect = 0.26 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 15/120 (12%) Frame = +3 Query: 288 EC-LRQDSCDQIIFTEPVRCQPGTSFQRDC---NTCVCLDNGLGLCSLDACRRSSTPKKF 455 EC +RQD+C +T P+ C P ++F D +TC D+ ++ C PK Sbjct: 44 ECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCKAQDDQPTCVCVEPC-----PKTL 98 Query: 456 ELIQGRECAPGSSWSNQC----NSCRCNA-------DGYGICSDEACTEHIIEPKKECAP 602 + + G + ++ N+C +C+ N Y C D CT P C P Sbjct: 99 KPVYGTD---NKNYDNECLLKLAACKSNTRILIAGFGRYNPCKDVNCTS---PPYSSCRP 152 >SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) Length = 960 Score = 32.3 bits (70), Expect = 0.35 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 10/113 (8%) Frame = +3 Query: 240 WESNC-HFCRCSDSG-----VAECLRQDSCD-QIIFTEPVRCQPG--TSFQRDC-NTCVC 389 W NC H C C++ +C D C +T P P S+ C NTC C Sbjct: 362 WGHNCAHPCNCTNGARCNAVTGQCACTDGCSCNAGWTGPECRDPCGLDSWGPGCTNTCQC 421 Query: 390 LDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADGYGIC 548 NG C + R + P C G +N N+C C A +C Sbjct: 422 SRNGE--CDAASGRCACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTNVC 472 >SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) Length = 1215 Score = 32.3 bits (70), Expect = 0.35 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = +3 Query: 111 SPGTEGPCAAEQE---SKDKPSQITTDDASAVQE-MQSEVECLAGTEWESNCHFCRCSDS 278 +P GPC+A P+Q T ++ SE EC GT ++S+ +C Sbjct: 784 NPAPTGPCSAGYYCTGGAKTPTQFVTSAGHYSEKGAASETECPVGT-YQSSDRASKC--- 839 Query: 279 GVAECLRQDSCDQIIFTEPVRCQPG 353 CL ++ CD++ P+ C G Sbjct: 840 --IPCLEKNYCDRMGLINPIPCPTG 862 >SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17) Length = 738 Score = 31.9 bits (69), Expect = 0.46 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Frame = +3 Query: 336 VRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPG-----SSWS 500 V+C PG SF ++ C C++ + + + G +C+PG S Sbjct: 211 VKCAPGKSFSESIDSSSC--KPCSKCAVGQMVERACNSTHDTLCG-DCSPGFYRDFSVHP 267 Query: 501 NQCNSCR-CNADGYGICSDEACTEHIIEPKKECA 599 C C C D + E CT + PKK+C+ Sbjct: 268 AVCGQCSYCCGDDIDVIEKE-CTAQGMPPKKQCS 300 >SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35) Length = 684 Score = 31.5 bits (68), Expect = 0.61 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 369 DCNTCVCLDNGLGLCSLD--ACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRC 524 +C C C+D G+ C CR S L G A GS + CN+C C Sbjct: 629 ECRLCQCVD-GVMKCEPRPVGCRVDSQDNMCHLENGEAYAEGSKHFDGCNNCIC 681 >SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) Length = 2160 Score = 31.1 bits (67), Expect = 0.80 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 121 QKAHVQQSKNQKTNRVR*QQMTRLPSKKCSRKWNAWREPSGRATATSA 264 Q+ QQ + Q + + QQ RLP +++ N + +P G A TSA Sbjct: 1611 QQLQHQQQQQQLQQQQQLQQQQRLPQHHLTQQQNPFYQPPGTAPVTSA 1658 >SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) Length = 814 Score = 31.1 bits (67), Expect = 0.80 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 121 QKAHVQQSKNQKTNRVR*QQMTRLPSKKCSRKWNAWREPSGRATATSA 264 Q+ QQ + Q + + QQ RLP +++ N + +P G A TSA Sbjct: 265 QQLQHQQQQQQLQQQQQLQQQQRLPQHHLTQQQNPFYQPPGTAPVTSA 312 >SB_45116| Best HMM Match : EGF (HMM E-Value=0) Length = 2023 Score = 31.1 bits (67), Expect = 0.80 Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 15/166 (9%) Frame = +3 Query: 87 CESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWESNCHFCR 266 CE +C PCA D+ + + S +Q C GT N Sbjct: 1018 CEIDINECD---SNPCANGGTCADQVNSFSCTCVSGYTGLQ----CKTGTVLRYNEKAVD 1070 Query: 267 CSDSGVAECLRQDSCDQIIFTEPVRCQP---GTSFQRDCNTCV---CLDNGLGLCSLD-- 422 ++ CL +C+ ++ +CQP GT+ + D N C C++ G ++ Sbjct: 1071 INECASNPCLNGGTCNDLVNGYNCKCQPGYNGTTCEIDINECASNQCVNGGTCTDLVNGF 1130 Query: 423 --ACRRSSTPKKFEL----IQGRECAPGSSWSNQCNSCRCN-ADGY 539 C K E+ + C G + ++Q NS C GY Sbjct: 1131 NCTCPPGYNGTKCEININECENNPCVNGGTCADQVNSFSCTCVSGY 1176 >SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) Length = 622 Score = 31.1 bits (67), Expect = 0.80 Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 20/106 (18%) Frame = +3 Query: 372 CNTCVCLDNGLGLCSLD-AC------RRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNA 530 C C+ GL LC D AC + S P L EC P ++ N N C NA Sbjct: 190 CENGQCVKRGL-LCDGDKACLDGSDEKHCSCPSNMFLCPSGECIPTTALCNNENDCSDNA 248 Query: 531 D----GYGICS--DEACTEHI-----IEPKKECAP--KTMWKNECN 629 D Y CS + C +I E +++C P T NEC+ Sbjct: 249 DERNCQYANCSLNNLGCRRNIDITQVNEEERKCKPLLSTYVDNECH 294 >SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14) Length = 338 Score = 31.1 bits (67), Expect = 0.80 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +3 Query: 252 CHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPG-TSFQRDCNTCVCLDNGLGLCSLDAC 428 CH CS SG+ C + SC I + C+PG T +C C + G S A Sbjct: 215 CHIDECS-SGINNCHQDASCANTIGSFACTCKPGYTGDGINCADC-AMGMESGAISDSAI 272 Query: 429 RRSSTPKKFELIQGR 473 SS +K GR Sbjct: 273 TASSYLEKLRPSNGR 287 >SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) Length = 683 Score = 31.1 bits (67), Expect = 0.80 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 16/122 (13%) Frame = +3 Query: 219 ECLAGTEWESN---CHFCRCSDSGVAECL-----RQDSC-DQIIFTEPVRCQPGT-SF-Q 365 +C+ GT + C C C+ +G + L Q SC + ++ + RC+ + F Sbjct: 136 KCVTGTYGNATAQQCKACDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGP 195 Query: 366 RDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSW-----SNQCNSCRCNA 530 C C C N G SL P E+I G +CA + C +C CN Sbjct: 196 AGCTECAC--NVHGSASLQCDDSGVCPCNLEVI-GTKCAQCKTGYFGLPKMTCKACDCNV 252 Query: 531 DG 536 DG Sbjct: 253 DG 254 >SB_32452| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 680 Score = 30.3 bits (65), Expect = 1.4 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 622 SFFHIVFGAHSFFGSIMCSVQASSLQMPYPSALHLQLLHWFD-HDDPGAHSLPWISSNFL 446 SF H+ F HS S M V S L++ H LHW D H G++ N Sbjct: 235 SFMHLAFLHHSMLSSDMTMVLPSHLEV--TQGCHHTTLHWDDTHGVTGSYKKVHPQQNLQ 292 Query: 445 GVD 437 G++ Sbjct: 293 GMN 295 >SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 487 Score = 29.9 bits (64), Expect = 1.9 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 9/149 (6%) Frame = +3 Query: 183 DASAVQEMQSEVECLAGTEWE-SNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS 359 D Q+++S + G W+ +C C C +G EC Q C + P++ + G Sbjct: 339 DQPVCQDVKSGELYVIGQSWKPDDCSTCFCKKNGKVECAHQ-MCGYPVCANPIK-ETG-- 394 Query: 360 FQRDCNTC--VCLDNGLGLCSLDAC-RRSSTPKKFELIQGRECAPGSSW-SNQCNSCRCN 527 C C +D G G D S P + + G W + C +C C Sbjct: 395 --HCCPICRDEIVDEGRGEDGGDVVDDPHSCP---DPVTGDYYHRFEMWQQDDCTACICG 449 Query: 528 ADGYGICSDEAC----TEHIIEPKKECAP 602 +D C+ + C ++ + K C P Sbjct: 450 SDRKLQCTKKTCPKLLCDNPVHNKGRCCP 478 >SB_16910| Best HMM Match : EGF (HMM E-Value=0) Length = 1552 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Frame = +3 Query: 354 TSFQRDCNTCVCLDNGLG----LCSLDACRRSSTPKKFELIQGRECAP 485 T+ + DCNTC C+ +C D C SST G C P Sbjct: 1195 TTVKEDCNTCSCVHGTRTCTKVVCGPDNCLNSSTVSNDICSMGSVCVP 1242 >SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0) Length = 561 Score = 29.1 bits (62), Expect = 3.2 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 8/159 (5%) Frame = +3 Query: 60 ICFIVLARHCESGALKCSPGTEGPCAAE------QESKDKPSQITTDDASAVQEMQSEVE 221 +C L R+ ++GA+ T E Q K PS+I S + + Sbjct: 277 LCLHFLRRNSKAGAVGAEEHTMAKYLMELTLIDYQSIKFLPSEIAAASLSLAMRVMGK-- 334 Query: 222 CLAGTEWESNC-HFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNTCVC-LD 395 G+EW H+ S+ ++ C+ Q ++ + + T + C++C Sbjct: 335 ---GSEWTPTLEHYSGYSEKKLSTCM-QRLAQLVLGARDSKQKDSTGRIQMCSSCFGDTK 390 Query: 396 NGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCN 512 LC + C + S P+ E + G + ++ CN Sbjct: 391 YQCILCEMPFCNKCSFPELDENVAGWKAGKSVAYCKCCN 429 >SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 344 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +3 Query: 351 GTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELI-QGRE 476 G DCN+CVC G +C+ C SS K L+ QG + Sbjct: 256 GAEIPTDCNSCVCA-CGRWVCTALDCNPSSNHVKASLVLQGEQ 297 >SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) Length = 218 Score = 28.7 bits (61), Expect = 4.3 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 9/41 (21%) Frame = +3 Query: 507 CNSCRCNADGYGICS---------DEACTEHIIEPKKECAP 602 C C CN+ CS D AC ++++EP K+C P Sbjct: 104 CQKCECNSGKASSCSIGYHCDALLDGACEKYVLEP-KQCCP 143 >SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) Length = 1207 Score = 28.7 bits (61), Expect = 4.3 Identities = 19/78 (24%), Positives = 32/78 (41%) Frame = +3 Query: 333 PVRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCN 512 PV C G ++ C+ C + C + R T E++ G + S + +C Sbjct: 772 PVACACGKTW---CSECQEETHWPAKCEIAQRFRKQTKAYQEILNGMDNRIKSVFVKRCP 828 Query: 513 SCRCNADGYGICSDEACT 566 +CR + G C +CT Sbjct: 829 ACRYPVEKNGGCPHMSCT 846 >SB_2169| Best HMM Match : EGF_CA (HMM E-Value=6.4e-33) Length = 133 Score = 28.7 bits (61), Expect = 4.3 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Frame = +3 Query: 87 CESGALKCSPGTE---GPCAAEQESKDKPSQITTDDASAVQEMQSE---VECLAGTEWE- 245 C++ A+KCS G E G C E ++ + + E + C G E+ Sbjct: 27 CQASAIKCSRGYEPQNGRCVDVDECSSGLARCPSGQSCVNTEGSYSCLPIGCSPGFEFRG 86 Query: 246 SNCHFCRCSDSGVAECLRQDSCDQIIFT-EPVRCQPGTSF 362 C SG+A C R+ C+ + V C+ G F Sbjct: 87 GKCQDIDECASGIARCGREQFCENVEGAYRCVTCRTGYRF 126 >SB_35754| Best HMM Match : DUF755 (HMM E-Value=2.4) Length = 604 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1 Query: 315 DHSCPASSTRRLLNQSTCRSGSCSPTRFPPGIP 217 D C +S RRL +ST + S PPG P Sbjct: 498 DDECLSSVARRLSTESTASTTDSSVASLPPGTP 530 >SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) Length = 198 Score = 28.7 bits (61), Expect = 4.3 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +3 Query: 348 PGTSFQRD--CNTCVCLDNGLGLCSLDACRRSSTPKKFELIQ-GRECAPGSSWSNQCNSC 518 PG F + +CV +GL C+ C S ++ E Q G P + QC C Sbjct: 21 PGGPFSANSFARSCVLGSDGLPTCT--NCSESHAGRQCERCQDGYYGTPTDPVNGQCRKC 78 Query: 519 RCNAD 533 CN + Sbjct: 79 NCNGN 83 >SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) Length = 203 Score = 28.3 bits (60), Expect = 5.7 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +3 Query: 384 VCLDNGLGLC-SLDACRRS-STPKKFELIQGRECAPGSSWSNQCNSCRCN 527 VC+ L L SL C RS ++++L Q R C S W Q C+ Sbjct: 112 VCVLGALPLPRSLTRCARSFGCGERYQLTQRRACPSSSRWPRQAYQSTCD 161 >SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) Length = 850 Score = 28.3 bits (60), Expect = 5.7 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 9/125 (7%) Frame = +3 Query: 288 EC-LRQDSCDQI----IFTEPVRCQPGTSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKK 452 EC +R+ +CDQ+ I + C G + + D TC +D L L R ++TP Sbjct: 248 ECEIRKHTCDQVCVNTIGSFRCGCNVGYTLRNDSKTCSDIDECLDDAHLCDQRCTNTPGS 307 Query: 453 FELIQGRECAPGSSWSNQCNSC----RCNADGYGICSDEACTEHIIEPKKECAPKTMWKN 620 + C G S S+ +C C +G CS + C + C N Sbjct: 308 YAC----GCYHGYSLSSDMKTCIDIDECTMTSHG-CS-QLCNNTLGGYNCYCLSGYSLGN 361 Query: 621 ECNTC 635 + TC Sbjct: 362 DNRTC 366 >SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) Length = 300 Score = 28.3 bits (60), Expect = 5.7 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%) Frame = +3 Query: 213 EVECLAGTEWESNCHFCRCSDSGVAECLRQDSCDQI----IFTEPVRCQPGTSFQRDCNT 380 + C +G + C DSG +C + +C + FT CQ G + DC Sbjct: 160 QCNCTSGFTGD-RCEKQCAGDSGGVDCRQHCNCTEWGTCNPFTGKCLCQSGF-YGEDCGA 217 Query: 381 CVCLDNGLG-LCSLDA-CRRSSTPKKFE-LIQGR--------ECAPGSSWSNQC-NSCRC 524 C D G C+ C++++T K + Q + EC+PG + N+C +C C Sbjct: 218 -ECPDGTYGPACTAHCKCQKNATCDKIDGTCQCKPGWTGIDCECSPGK-YGNKCEKTCSC 275 Query: 525 N 527 N Sbjct: 276 N 276 >SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 2411 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 486 GSSWSNQC----NSC----RCNADGYGICSDEACTEHIIEPKKECAPKTMWKNECN 629 G +++N+C +SC + G C +AC+ H+ E ++C KT +++EC+ Sbjct: 973 GKTYTNECLLKVDSCAEQKEISVKHKGAC--DACSNHVCEENEDCDKKT-YQSECH 1025 >SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) Length = 587 Score = 28.3 bits (60), Expect = 5.7 Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 6/144 (4%) Frame = +3 Query: 222 CLAGTEWESNCHFCRCSDSGVA--ECLRQDSCDQIIFTEPVRCQPGTSF----QRDCNTC 383 C+A NC C CS G +C C +C S+ +C C Sbjct: 374 CMASYTGFPNCRKCECSPVGSVSPDCDVTGHCTCTRGFGGRKCDRCASYGYYGYPNCKAC 433 Query: 384 VCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADGYGICSDEAC 563 C G + + FE ++ +C G +C C CN G + + Sbjct: 434 NCDTRGSLSTFCGSWGQCQCRMNFEGLKCDQCRVGYYDFPRCKQCGCNPAGIRLLPGQQN 493 Query: 564 TEHIIEPKKECAPKTMWKNECNTC 635 T K + + EC C Sbjct: 494 TCGNGNDTKCTCKENVQGAECEQC 517 >SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) Length = 3809 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = -3 Query: 292 HSATPESEHLQKWQLLSHSVPARHSTSDCISWTAD 188 H TPE E + L P + + +CISW+ + Sbjct: 400 HEKTPEMEFAEHGTLKEDVCPGKVYSDECISWSKE 434 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 27.9 bits (59), Expect = 7.5 Identities = 17/68 (25%), Positives = 27/68 (39%) Frame = +3 Query: 357 SFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGSSWSNQCNSCRCNADG 536 +F+++ T V +DNG G C S F I GR W + + R + Sbjct: 2088 AFEQNGGTVVVIDNGSGFCKAGLSTDESPRVVFPAIVGR--PRHKMWEHAFDQLRVRGED 2145 Query: 537 YGICSDEA 560 + + EA Sbjct: 2146 FPVLLTEA 2153 >SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2028 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/61 (21%), Positives = 27/61 (44%) Frame = +3 Query: 96 GALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEWESNCHFCRCSD 275 G + S G + A +++ + ++ + A++E + CL G + + C C D Sbjct: 12 GTRQASIGQDLGALAYDDTQTETLDLSDVEVLAIEETMCDPPCLRGEQCDEELGVCVCDD 71 Query: 276 S 278 S Sbjct: 72 S 72 >SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4527 Score = 27.5 bits (58), Expect = 9.9 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Frame = +3 Query: 477 CAP-GSSWSNQCNS--CRCNADGYGICSDEACTEHIIEPKK---ECAP 602 CAP GSS +N S C CNA GY E C E I E CAP Sbjct: 604 CAPIGSSCTNNAGSYTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 649 >SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25) Length = 86 Score = 27.5 bits (58), Expect = 9.9 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Frame = +3 Query: 477 CAP-GSSWSNQCNS--CRCNADGYGICSDEACTEHIIEPKK---ECAP 602 CAP GSS +N S C CNA GY E C E I E CAP Sbjct: 12 CAPIGSSCTNNAGSFTCSCNA-GYA-GDGETCVEDIDECSSGAHTCAP 57 >SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31) Length = 996 Score = 27.5 bits (58), Expect = 9.9 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Frame = +3 Query: 240 WESNCHFCRC--SDSGVAECLR-----QDSCDQIIFTEPVRCQPGTSF-QRDCNTCVCLD 395 WE N C+C +D+ +C SC + P C G + QR C CVC Sbjct: 814 WEPNNCLCKCRYADTQPKKCPEGHRWSASSCSCMCDKAPEVCPVGKYWSQRSCG-CVCSA 872 Query: 396 NGLGLCS 416 + +G C+ Sbjct: 873 HVVGACN 879 >SB_11378| Best HMM Match : Strep_SA_rep (HMM E-Value=2) Length = 319 Score = 27.5 bits (58), Expect = 9.9 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = +3 Query: 123 EGPCAAEQESKDKPSQITTDDASAVQEMQSEVECLAGTEW-ESNCHFCRCSDSGVAECLR 299 E P AE+E DK + D Q+ + + LA +W ++ C GVA + Sbjct: 68 ESPALAEKERHDKALEKYQRDYGRYQQRRQKNPRLASAKWLQTGCGVLCTYVEGVAAAAK 127 Query: 300 QD 305 +D Sbjct: 128 RD 129 >SB_57083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 134 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +1 Query: 499 RTSVTVVGAMPMDTAFVVTKPALN-TLSSQRKNVRRRRCG 615 +TS T+V P D+ +++K A+N ++ +K ++ +R G Sbjct: 19 KTSRTIVFPYPTDSTLLISKAAVNAAVTMFKKGIKYKRAG 58 >SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 555 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -3 Query: 631 VLHSFFHIVFGAHSFFGSIMCSVQASSLQMPYPSALHL-QLLHW 503 V H+ FHI HSF V S L P S +H+ Q++H+ Sbjct: 458 VTHTSFHISSRTHSFTYRHARIVSHSELNYPKTSVVHVDQIVHF 501 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,517,608 Number of Sequences: 59808 Number of extensions: 578333 Number of successful extensions: 1984 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1755 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1977 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1633044375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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