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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1067
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B503E Cluster: PREDICTED: similar to splicing f...   227   1e-58
UniRef50_UPI0000EBDD2E Cluster: PREDICTED: similar to splicing f...   170   2e-41
UniRef50_P26368 Cluster: Splicing factor U2AF 65 kDa subunit (U2...   170   2e-41
UniRef50_P90978 Cluster: Splicing factor U2AF 65 kDa subunit; n=...   160   2e-38
UniRef50_UPI000065F936 Cluster: Splicing factor U2AF 65 kDa subu...   137   1e-31
UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p...   127   1e-28
UniRef50_Q4SAX3 Cluster: Chromosome 3 SCAF14679, whole genome sh...   125   6e-28
UniRef50_UPI0000F2E898 Cluster: PREDICTED: similar to U2 (RNU2) ...   105   5e-22
UniRef50_Q4TF95 Cluster: Chromosome undetermined SCAF4753, whole...    73   3e-12
UniRef50_Q5C2P7 Cluster: SJCHGC09464 protein; n=1; Schistosoma j...    64   2e-09
UniRef50_Q54LV5 Cluster: RNA-binding region-containing protein; ...    64   2e-09
UniRef50_Q5KFM4 Cluster: RRNA primary transcript binding protein...    63   4e-09
UniRef50_Q0UUV3 Cluster: Putative uncharacterized protein; n=1; ...    62   1e-08
UniRef50_Q4P3F0 Cluster: Putative uncharacterized protein; n=3; ...    60   4e-08
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11...    53   5e-06
UniRef50_Q5CXC0 Cluster: Splicing factor U2AF U2 snRNP auxiliary...    51   2e-05
UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4; ...    48   1e-04
UniRef50_A4VDP3 Cluster: Putative uncharacterized protein; n=1; ...    47   3e-04
UniRef50_A2Q4R3 Cluster: RNA-binding region RNP-1; n=2; core eud...    46   6e-04
UniRef50_Q3EBP3 Cluster: Uncharacterized protein At2g33435.1; n=...    42   0.009
UniRef50_Q3E9P9 Cluster: Uncharacterized protein At4g36690.3; n=...    42   0.009
UniRef50_O23212 Cluster: Splicing factor-like protein; n=22; Euk...    42   0.009
UniRef50_A0EAC5 Cluster: Chromosome undetermined scaffold_86, wh...    42   0.009
UniRef50_A7NXF8 Cluster: Chromosome chr5 scaffold_2, whole genom...    39   0.066
UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=...    38   0.12 
UniRef50_Q5CSE3 Cluster: Splicing factor U2AF like SnRNP auxilar...    38   0.15 
UniRef50_A7AR94 Cluster: Putative uncharacterized protein; n=1; ...    37   0.27 
UniRef50_Q10S20 Cluster: RNA recognition motif family protein, e...    37   0.35 
UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or o...    36   0.47 
UniRef50_UPI0000498FCC Cluster: U2 snRNP auxiliary factor large ...    36   0.62 
UniRef50_A2AEK1 Cluster: Cleavage stimulation factor, 3' pre-RNA...    36   0.62 
UniRef50_O22794 Cluster: Putative splicing factor U2AF large cha...    36   0.62 
UniRef50_Q4UCN0 Cluster: Snrnp splicing factor (U2AF), putative;...    36   0.62 
UniRef50_A1CA44 Cluster: RNP domain protein; n=13; Pezizomycotin...    36   0.62 
UniRef50_Q0LJY9 Cluster: Response regulator receiver; n=1; Herpe...    35   1.1  
UniRef50_Q7RQR4 Cluster: KED; n=3; Plasmodium (Vinckeia)|Rep: KE...    35   1.1  
UniRef50_Q8IBU0 Cluster: Putative uncharacterized protein PF07_0...    35   1.4  
UniRef50_Q2U8W5 Cluster: Predicted protein; n=1; Aspergillus ory...    35   1.4  
UniRef50_Q7RNT2 Cluster: 19096-22891; n=6; Plasmodium|Rep: 19096...    34   1.9  
UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyc...    34   1.9  
UniRef50_Q9U1N0 Cluster: Hrp65 protein; n=3; Chironomus tentans|...    34   1.9  
UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella ve...    34   2.5  
UniRef50_A7PJ01 Cluster: Chromosome chr13 scaffold_17, whole gen...    33   3.3  
UniRef50_Q0ZAL3 Cluster: Splicing factor proline-and glutamine-r...    33   3.3  
UniRef50_A5GEF6 Cluster: RNP-1 like RNA-binding protein; n=1; Ge...    33   4.4  
UniRef50_UPI00006CBD24 Cluster: hypothetical protein TTHERM_0015...    33   5.8  
UniRef50_Q2JJY2 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  
UniRef50_Q70JP5 Cluster: Putative DIP2 protein; n=5; BEP clade|R...    33   5.8  
UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Re...    33   5.8  
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try...    33   5.8  
UniRef50_Q4N3F2 Cluster: U2 small nuclear ribonucleoprotein, aux...    33   5.8  
UniRef50_UPI0000E47894 Cluster: PREDICTED: similar to scavenger ...    32   7.6  
UniRef50_UPI00006CBE3B Cluster: hypothetical protein TTHERM_0031...    32   7.6  
UniRef50_Q7ZUX2 Cluster: Cstf2 protein; n=2; Danio rerio|Rep: Cs...    32   7.6  
UniRef50_Q9VHP3 Cluster: CG8021-PA; n=3; Diptera|Rep: CG8021-PA ...    32   7.6  
UniRef50_A7AU39 Cluster: RNA recognition motif (RRM)-containing ...    32   7.6  
UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845 Schizosacch...    32   7.6  
UniRef50_Q00880 Cluster: Cutinase negative acting protein; n=2; ...    32   7.6  
UniRef50_A6SSI6 Cluster: Putative uncharacterized protein; n=2; ...    32   7.6  
UniRef50_Q04047 Cluster: Protein no-on-transient A; n=61; Dipter...    32   7.6  

>UniRef50_UPI00015B503E Cluster: PREDICTED: similar to splicing
           factor u2af large subunit; n=2; Apocrita|Rep: PREDICTED:
           similar to splicing factor u2af large subunit - Nasonia
           vitripennis
          Length = 547

 Score =  227 bits (556), Expect = 1e-58
 Identities = 107/113 (94%), Positives = 107/113 (94%)
 Frame = +3

Query: 210 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 389
           LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP
Sbjct: 185 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 244

Query: 390 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETTQ 548
           FGVTEEE MEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL     DETTQ
Sbjct: 245 FGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ 297


>UniRef50_UPI0000EBDD2E Cluster: PREDICTED: similar to splicing
           factor U2AF homolog - mouse; n=2; Bos taurus|Rep:
           PREDICTED: similar to splicing factor U2AF homolog -
           mouse - Bos taurus
          Length = 330

 Score =  170 bits (413), Expect = 2e-41
 Identities = 84/120 (70%), Positives = 89/120 (74%), Gaps = 8/120 (6%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 368
           YWDVPPPGFEHITP+QYKAMQAAGQIPA  +  T            VPVVGS +TRQARR
Sbjct: 91  YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150

Query: 369 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETTQ 548
           LYVGNIPFG+TEE  M+FFN QM L GL QA GNPVLA QIN DKNFAFL     DETTQ
Sbjct: 151 LYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 210


>UniRef50_P26368 Cluster: Splicing factor U2AF 65 kDa subunit (U2
           auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
           factor large subunit) (hU2AF(65)); n=44; Eumetazoa|Rep:
           Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (hU2AF(65)) - Homo sapiens (Human)
          Length = 475

 Score =  170 bits (413), Expect = 2e-41
 Identities = 84/120 (70%), Positives = 89/120 (74%), Gaps = 8/120 (6%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 368
           YWDVPPPGFEHITP+QYKAMQAAGQIPA  +  T            VPVVGS +TRQARR
Sbjct: 91  YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150

Query: 369 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETTQ 548
           LYVGNIPFG+TEE  M+FFN QM L GL QA GNPVLA QIN DKNFAFL     DETTQ
Sbjct: 151 LYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 210


>UniRef50_P90978 Cluster: Splicing factor U2AF 65 kDa subunit; n=7;
           Bilateria|Rep: Splicing factor U2AF 65 kDa subunit -
           Caenorhabditis elegans
          Length = 496

 Score =  160 bits (388), Expect = 2e-38
 Identities = 74/111 (66%), Positives = 86/111 (77%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPF 392
           +WDVPP GFE  TP++YK MQAAGQ+P   V    Q+AVPVVG ++T Q+RRLYVGNIPF
Sbjct: 138 FWDVPPTGFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPF 193

Query: 393 GVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETT 545
           G  EE  ++FFNQQMHL GLAQA GNP+L CQINLDKNFAF+     DETT
Sbjct: 194 GCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETT 244


>UniRef50_UPI000065F936 Cluster: Splicing factor U2AF 65 kDa subunit
           (U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
           factor large subunit) (hU2AF(65)).; n=1; Takifugu
           rubripes|Rep: Splicing factor U2AF 65 kDa subunit (U2
           auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
           factor large subunit) (hU2AF(65)). - Takifugu rubripes
          Length = 555

 Score =  137 bits (332), Expect = 1e-31
 Identities = 79/136 (58%), Positives = 84/136 (61%), Gaps = 34/136 (25%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQ--------------------------AAGQIPANIVADT 314
           YWDVPPPGFEHITP+QYKAMQ                          AAGQIPA  +  T
Sbjct: 78  YWDVPPPGFEHITPMQYKAMQGTKAGLNTRPSGFSRTRLPFRDARVSAAGQIPATALLPT 137

Query: 315 --------PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN 470
                       VPVVGS +TRQARRLYVGNIPFG+TEE  M+FFN QM L GL QA GN
Sbjct: 138 MTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN 197

Query: 471 PVLACQINLDKNFAFL 518
           PVLA QIN DKNFAFL
Sbjct: 198 PVLAVQINQDKNFAFL 213


>UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p -
           Drosophila melanogaster (Fruit fly)
          Length = 449

 Score =  127 bits (307), Expect = 1e-28
 Identities = 62/116 (53%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
 Frame = +3

Query: 216 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFG 395
           WD+PP G+ H+TP Q+KAM A+GQI + I++D          S ITRQARRLYVGNIPFG
Sbjct: 62  WDIPPEGYNHLTPQQHKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFG 121

Query: 396 VTEEETMEFFNQQMHLSGLAQAA-----GNPVLACQINLDKNFAFLNSDQFDETTQ 548
           VT+EE M+FFN Q+   G    +     GN VL CQ NL+KNFAFL     DE +Q
Sbjct: 122 VTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQ 177


>UniRef50_Q4SAX3 Cluster: Chromosome 3 SCAF14679, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 3 SCAF14679, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 600

 Score =  125 bits (302), Expect = 6e-28
 Identities = 79/141 (56%), Positives = 87/141 (61%), Gaps = 39/141 (27%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQ----------------------AAGQIPANIVADTPQAA 326
           YWDVPPPGFEHITPLQYKAMQ                      AAGQIP   +  T  +A
Sbjct: 89  YWDVPPPGFEHITPLQYKAMQGRAPPRLPGPAPRLPSVSLWPPAAGQIPTMALLATAASA 148

Query: 327 --------VPVVGSTITRQARRLYVGNIPFGVTE--------EETM-EFFNQQMHLSGLA 455
                   VPV GS +TRQARRLYVGNIPFG+TE        +E+M EFFN QM L+GL+
Sbjct: 149 GVVAAPTPVPVAGSQMTRQARRLYVGNIPFGLTEALRRLCSPQESMAEFFNAQMRLAGLS 208

Query: 456 QAAGNPVLACQINLDKNFAFL 518
           QA  NPVLA QIN DKNFAFL
Sbjct: 209 QAPSNPVLAVQINQDKNFAFL 229


>UniRef50_UPI0000F2E898 Cluster: PREDICTED: similar to U2 (RNU2)
           small nuclear RNA auxiliary factor 2,; n=1; Monodelphis
           domestica|Rep: PREDICTED: similar to U2 (RNU2) small
           nuclear RNA auxiliary factor 2, - Monodelphis domestica
          Length = 386

 Score =  105 bits (253), Expect = 5e-22
 Identities = 51/72 (70%), Positives = 55/72 (76%), Gaps = 8/72 (11%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 368
           YWDVPPPGFEHITP+QYKAMQAAGQIPA  +  T            VPVVGS +TRQARR
Sbjct: 91  YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150

Query: 369 LYVGNIPFGVTE 404
           LYVGNIPFG+TE
Sbjct: 151 LYVGNIPFGITE 162


>UniRef50_Q4TF95 Cluster: Chromosome undetermined SCAF4753, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF4753,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 351

 Score = 73.3 bits (172), Expect = 3e-12
 Identities = 45/78 (57%), Positives = 48/78 (61%), Gaps = 18/78 (23%)
 Frame = +3

Query: 225 PPPGFEHITPLQYKAMQ----------AAGQIPANIVADTPQ--------AAVPVVGSTI 350
           PPPGFEHITPLQYKAMQ          AAGQIP    A   +          VPV GS +
Sbjct: 76  PPPGFEHITPLQYKAMQGLPSVSLWPPAAGQIPNYGAAGHGRQRGRGGAPTPVPVAGSQM 135

Query: 351 TRQARRLYVGNIPFGVTE 404
           TRQARRLYVGN PFG+TE
Sbjct: 136 TRQARRLYVGNNPFGLTE 153


>UniRef50_Q5C2P7 Cluster: SJCHGC09464 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09464 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 159

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 213 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVA 308
           YWDVPPPGFEH+TP QYKA+Q +GQ+P N+ A
Sbjct: 127 YWDVPPPGFEHVTPAQYKALQTSGQVPVNVYA 158


>UniRef50_Q54LV5 Cluster: RNA-binding region-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
           region-containing protein - Dictyostelium discoideum AX4
          Length = 671

 Score = 64.1 bits (149), Expect = 2e-09
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQF 533
           +Q+RR+YVGNIP G+++ E MEFFN  +  + L    G PV+ CQIN  K FAF+     
Sbjct: 265 KQSRRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGPPVVFCQINAPKCFAFIEFRSP 324

Query: 534 DETT 545
           +E T
Sbjct: 325 EEAT 328


>UniRef50_Q5KFM4 Cluster: RRNA primary transcript binding protein,
           putative; n=2; Filobasidiella neoformans|Rep: RRNA
           primary transcript binding protein, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 651

 Score = 63.3 bits (147), Expect = 4e-09
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = +3

Query: 216 WDVPPPGFEHITPLQYKAM----QAAGQIP--ANIVADTPQAAVPVVGSTITRQARRLYV 377
           WD  P  F+ I+ L+ K         G++P  A++       A     S   RQ  RLY+
Sbjct: 220 WDTAPVQFQGISALEAKTTGLFTYGPGRVPPPAHLGIPATFVAGAFPPSNPVRQNNRLYI 279

Query: 378 GNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETT 545
           G I   + E++  +FFN  M   G+A    +PV  CQIN D+NFAF+     ++ T
Sbjct: 280 GGIKEDMQEQQIQDFFNNLMKEKGMADGKEDPVKQCQINNDRNFAFIELHTPEQAT 335


>UniRef50_Q0UUV3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 606

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
 Frame = +3

Query: 216 WDVPPPGFEHITPLQYK---------AMQAAGQIPANIVA----DTPQAAVPVVGSTITR 356
           WD+ P G+E+IT  Q K         A +AA   P+ + A        A+   +    ++
Sbjct: 224 WDIKPAGYENITAEQAKLSGMFPLPGAPRAAPMDPSKLAAFMSPSAGTASAAALAPGASK 283

Query: 357 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAG-NPVLACQINLDKNFAFLNSDQF 533
           Q++RLYV N+P G T EE +EFFN Q  L+GL   +G +P L+ QI   K +A L     
Sbjct: 284 QSKRLYVHNLPSGTTSEELLEFFNLQ--LNGLNVVSGQDPCLSAQIASSKTYAALEFKTP 341

Query: 534 DETT 545
           ++ T
Sbjct: 342 EDAT 345


>UniRef50_Q4P3F0 Cluster: Putative uncharacterized protein; n=3;
           Fungi/Metazoa group|Rep: Putative uncharacterized
           protein - Ustilago maydis (Smut fungus)
          Length = 727

 Score = 59.7 bits (138), Expect = 4e-08
 Identities = 28/64 (43%), Positives = 38/64 (59%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQF 533
           RQARRLYVGNI     E+  + FFN+QM    L    G P ++ Q+N+DK +AF+     
Sbjct: 350 RQARRLYVGNITHQANEQNIVAFFNEQMLKLKLGTEPGEPAVSAQVNVDKGYAFVEFRHP 409

Query: 534 DETT 545
           +E T
Sbjct: 410 EEAT 413


>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
           Pezizomycotina|Rep: Contig An07c0080, complete genome -
           Aspergillus niger
          Length = 598

 Score = 52.8 bits (121), Expect = 5e-06
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
 Frame = +3

Query: 216 WDVPPPGFEHITPLQYK---------AMQAAGQIPANIVADTPQAA-----VPVVGSTIT 353
           WD+ PPG+E++T  Q K         A +     P+ + A   Q A        +  + +
Sbjct: 189 WDIKPPGYENVTAEQAKLSGMFPLPGAPRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNS 248

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQF 533
           RQA+RL+V NIP  VT E  + FFN Q++   + Q+  +P ++ Q+  D  FA L     
Sbjct: 249 RQAKRLFVYNIPESVTGETLLAFFNVQLNGLNVIQSV-DPCISAQVAQDHTFALLEFKSP 307

Query: 534 DETT 545
           ++ T
Sbjct: 308 NDAT 311


>UniRef50_Q5CXC0 Cluster: Splicing factor U2AF U2 snRNP auxiliary
           factor large subunit; 3 RRM domains; n=3;
           Cryptosporidium|Rep: Splicing factor U2AF U2 snRNP
           auxiliary factor large subunit; 3 RRM domains -
           Cryptosporidium parvum Iowa II
          Length = 492

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 22/66 (33%), Positives = 38/66 (57%)
 Frame = +3

Query: 342 STITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLN 521
           S  ++  R +YVGN+P G+T  E +E+ N+ +  + ++   GNPV++  IN D  +AF  
Sbjct: 109 SFTSKPLREVYVGNLPQGITVTELLEYINRSIIKNSVSHTNGNPVVSAWINSDGKYAFCE 168

Query: 522 SDQFDE 539
               +E
Sbjct: 169 CRSIEE 174


>UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 620

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = +3

Query: 345 TITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNS 524
           T +RQ++RL + N+P G TE+  + F N Q++   + +A+ +P LACQ+  D +FA +  
Sbjct: 287 TNSRQSKRLILSNLPAGTTEDSLISFLNLQLNGLNVIEAS-DPCLACQMAPDGSFAMVEF 345

Query: 525 DQFDETT 545
               +TT
Sbjct: 346 RSPSDTT 352


>UniRef50_A4VDP3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 471

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQ---AAGNPVLACQINLDKNFAFLNS 524
           R ARRLY+GNIP  + +E   E+  + +  +G  Q    + NP++ C+I+    FAF   
Sbjct: 31  RHARRLYIGNIPETINQEYLSEWLYRSLEAAGGLQPSLPSENPIVKCEIDPKGRFAFTEL 90

Query: 525 DQFDETT 545
              +ETT
Sbjct: 91  RSIEETT 97


>UniRef50_A2Q4R3 Cluster: RNA-binding region RNP-1; n=2; core
           eudicotyledons|Rep: RNA-binding region RNP-1 - Medicago
           truncatula (Barrel medic)
          Length = 257

 Score = 46.0 bits (104), Expect = 6e-04
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           TR ARR+YVG +P    E+    FF+Q M  + G +  +G+ V+   IN +K FAF+   
Sbjct: 174 TRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMR 233

Query: 528 QFDETT 545
             +E +
Sbjct: 234 TVEEAS 239


>UniRef50_Q3EBP3 Cluster: Uncharacterized protein At2g33435.1; n=2;
            Arabidopsis thaliana|Rep: Uncharacterized protein
            At2g33435.1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 979

 Score = 41.9 bits (94), Expect = 0.009
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 351  TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQINLDKNFAFL 518
            TR+ RRLY  N+P   +E+  +E FN  M  SG     G+ P ++C IN +K+ A +
Sbjct: 874  TRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCIINKEKSQALV 930


>UniRef50_Q3E9P9 Cluster: Uncharacterized protein At4g36690.3; n=9;
           Magnoliophyta|Rep: Uncharacterized protein At4g36690.3 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 565

 Score = 41.9 bits (94), Expect = 0.009
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           TR ARR+YVG +     E+    FF+Q M  + G     G+ V+   IN +K FAF+   
Sbjct: 235 TRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMR 294

Query: 528 QFDETT 545
             +E +
Sbjct: 295 SVEEAS 300


>UniRef50_O23212 Cluster: Splicing factor-like protein; n=22;
           Eukaryota|Rep: Splicing factor-like protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 573

 Score = 41.9 bits (94), Expect = 0.009
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           TR ARR+YVG +     E+    FF+Q M  + G     G+ V+   IN +K FAF+   
Sbjct: 235 TRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMR 294

Query: 528 QFDETT 545
             +E +
Sbjct: 295 SVEEAS 300


>UniRef50_A0EAC5 Cluster: Chromosome undetermined scaffold_86, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_86,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 402

 Score = 41.9 bits (94), Expect = 0.009
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 360 ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDE 539
           A RLY+GN+P  V ++    +  QQM   G     G+PV+  Q+   + + F+     +E
Sbjct: 87  AVRLYLGNLPDNVDKDHLHNYIRQQMESHGAVLDPGDPVIQVQLQPGQKYCFVQFRSIEE 146

Query: 540 T 542
           T
Sbjct: 147 T 147


>UniRef50_A7NXF8 Cluster: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr5 scaffold_2, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 902

 Score = 39.1 bits (87), Expect = 0.066
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQINLDKNFAFL 518
           TR  RRLYV N+P   +E+  ME  N  +  SG+    G  P ++C I+ +K  A +
Sbjct: 423 TRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQALV 479


>UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=5;
           Plasmodium|Rep: U2 snRNP auxiliary factor, putative -
           Plasmodium vivax
          Length = 914

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHL----SGLAQAAGN----PVLACQI-NLDKN 506
           ++ R+LY+GNIP    +EE ++FFN  +      S L    G+    P+L C+I N++  
Sbjct: 541 KKQRKLYIGNIPPNSKQEELIDFFNNTLASIIKDSSLEIKIGDIVLLPILKCEIFNVESR 600

Query: 507 FAFL 518
           F FL
Sbjct: 601 FCFL 604


>UniRef50_Q5CSE3 Cluster: Splicing factor U2AF like SnRNP auxilary
           factor large subunit, RRM domain; n=2;
           Cryptosporidium|Rep: Splicing factor U2AF like SnRNP
           auxilary factor large subunit, RRM domain -
           Cryptosporidium parvum Iowa II
          Length = 330

 Score = 37.9 bits (84), Expect = 0.15
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 351 TRQARRLYVGNIP--FGVTEEETMEFFNQQMHLSGLA-QAAGNPVLACQINLDK-NFAFL 518
           TR+ RRLY GN+P   G+TE    +   Q+M L GL      NP+L       K N+ F+
Sbjct: 52  TRRFRRLYFGNLPINLGLTESSFQQIVWQEMALRGLCLNPNENPILCVWFAQKKGNYGFV 111

Query: 519 NSDQFDET 542
                +ET
Sbjct: 112 EFRTVEET 119


>UniRef50_A7AR94 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 400

 Score = 37.1 bits (82), Expect = 0.27
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQ 530
           T+  R +Y+GNIP        +EF N  +         GNP     I+ D ++AF+    
Sbjct: 21  TKPYREIYIGNIPPQADVNNLLEFLNDALTAVNGTSIPGNPCQKGWISADSHYAFVEMRT 80

Query: 531 FDETT 545
            +E +
Sbjct: 81  MEEAS 85


>UniRef50_Q10S20 Cluster: RNA recognition motif family protein,
           expressed; n=7; Oryza sativa|Rep: RNA recognition motif
           family protein, expressed - Oryza sativa subsp. japonica
           (Rice)
          Length = 964

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA--QAAGNPVLACQINLDKNFAFL 518
           TR  RRL++ N+P   TE+  +   N+ +  S  +  Q +  P L+C IN DK  AF+
Sbjct: 470 TRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFV 527


>UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or off
           transient A CG4211-PB, isoform B; n=1; Apis
           mellifera|Rep: PREDICTED: similar to no on or off
           transient A CG4211-PB, isoform B - Apis mellifera
          Length = 565

 Score = 36.3 bits (80), Expect = 0.47
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           RLY+GN+   VTEEE  + F Q   +S L            +N +KNFAFL  D
Sbjct: 151 RLYIGNLTNDVTEEEIQQMFQQYGEISELF-----------VNKEKNFAFLRMD 193


>UniRef50_UPI0000498FCC Cluster: U2 snRNP auxiliary factor large
           subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U2
           snRNP auxiliary factor large subunit - Entamoeba
           histolytica HM-1:IMSS
          Length = 712

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQA--AGNPVLACQINLDKNFAFLNSD 527
           R A+R+YVGNI    +E++ ++ FN+ M            + +   ++N ++++AFL   
Sbjct: 139 RAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTRDIITHIEVNYERSYAFLEFR 198

Query: 528 QFDETTQ 548
             +E  +
Sbjct: 199 TLEEAVK 205


>UniRef50_A2AEK1 Cluster: Cleavage stimulation factor, 3' pre-RNA
           subunit 2; n=6; Bilateria|Rep: Cleavage stimulation
           factor, 3' pre-RNA subunit 2 - Mus musculus (Mouse)
          Length = 554

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 321 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
           A +PV    + R  R ++VGNIP+  TEE+  + F++
Sbjct: 2   AGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38


>UniRef50_O22794 Cluster: Putative splicing factor U2AF large chain;
           n=2; Arabidopsis thaliana|Rep: Putative splicing factor
           U2AF large chain - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 475

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +3

Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLAC 485
           TR+ RRLY  N+P   +E+  +E FN  M  SG     G+ P ++C
Sbjct: 206 TRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISC 251


>UniRef50_Q4UCN0 Cluster: Snrnp splicing factor (U2AF), putative;
           n=2; Theileria|Rep: Snrnp splicing factor (U2AF),
           putative - Theileria annulata
          Length = 486

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 23/78 (29%), Positives = 37/78 (47%)
 Frame = +3

Query: 312 TPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 491
           T Q+ +  +GS   +  R +Y+GNIP     E  M+  NQ +         GNP L   I
Sbjct: 90  TAQSGLEGIGS---KAFREIYIGNIPPVGDIEILMDIINQALISVNGTSMPGNPCLKGWI 146

Query: 492 NLDKNFAFLNSDQFDETT 545
           + D ++AF+     +E +
Sbjct: 147 SSDGHYAFIELRTMEEAS 164


>UniRef50_A1CA44 Cluster: RNP domain protein; n=13;
           Pezizomycotina|Rep: RNP domain protein - Aspergillus
           clavatus
          Length = 378

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 297 NIVADTPQAAVPVVGSTITR--QARRLYVGNIPFGVTEEETMEFF 425
           N  A  P AA P   +      + RRLY+GN+ +  TE E  EFF
Sbjct: 22  NGTAPAPAAAQPTTDAAAASADEGRRLYIGNLAYATTEGELKEFF 66


>UniRef50_Q0LJY9 Cluster: Response regulator receiver; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Response
           regulator receiver - Herpetosiphon aurantiacus ATCC
           23779
          Length = 248

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 209 ALLGCTAAGIRAYHAITIQGDASGGSDSCQYCRRHT 316
           AL     AG++A   IT+ G+A  G D+ ++C +HT
Sbjct: 14  ALRAAMVAGLQATKEITVIGEAGSGEDAIEWCAQHT 49


>UniRef50_Q7RQR4 Cluster: KED; n=3; Plasmodium (Vinckeia)|Rep: KED -
           Plasmodium yoelii yoelii
          Length = 858

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +3

Query: 315 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ-QMHLSGLAQAAGNPVLACQI 491
           P+  +  + +   + AR LYVGNIP  +  +E ++F N   + L        N  L   I
Sbjct: 399 PELGLSTIDANAEKTARELYVGNIPQNIDIQEIVKFLNTCLLILYNKENENENICLKACI 458

Query: 492 NLDKNFAFLNSDQFDETT 545
             D  +AF+      +T+
Sbjct: 459 RGDTRYAFVEFRSLQDTS 476


>UniRef50_Q8IBU0 Cluster: Putative uncharacterized protein
           PF07_0066; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0066 - Plasmodium falciparum (isolate 3D7)
          Length = 1125

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 327 VPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ-QMHLSGLAQAAGNPVLACQINLDK 503
           +P +   I + AR LYVGNIP  +  +E +++ N   + L        N  L   I  D 
Sbjct: 639 LPTIDVNIEKTARELYVGNIPQHIDIQEIVKYLNSCLLILYNKENENENICLKACIRGDT 698

Query: 504 NFAFLNSDQFDETT 545
           ++AF+      +T+
Sbjct: 699 HYAFVEFRNIQDTS 712


>UniRef50_Q2U8W5 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 104

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = +3

Query: 276 AAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGL 452
           AA +   N  A    A      +    + RRLY+GN+ +  TE E  EFF       GL
Sbjct: 18  AATEATTNGTAPAAPAQSTDAAAASADEGRRLYIGNLAYATTEGELKEFFKNYKVFLGL 76


>UniRef50_Q7RNT2 Cluster: 19096-22891; n=6; Plasmodium|Rep:
           19096-22891 - Plasmodium yoelii yoelii
          Length = 546

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +3

Query: 351 TRQARRLYVGNIP--FGVTEEETMEFFNQQMHLSGLAQAAG-NPVLACQINLDK-NFAFL 518
           TR+ RRLY GN+P   G+TE    E    +M           NPVL      DK N+ F+
Sbjct: 256 TRKLRRLYFGNLPLHLGLTENAFQEIVWDEMKKRKFCNNENINPVLYVWFAKDKGNYGFV 315

Query: 519 NSDQFDET 542
                +ET
Sbjct: 316 EFSTVEET 323


>UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyces
           cerevisiae YNL197c; n=1; Yarrowia lipolytica|Rep:
           Similarities with sp|P34761 Saccharomyces cerevisiae
           YNL197c - Yarrowia lipolytica (Candida lipolytica)
          Length = 625

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 369 LYVGNIPFGVTEEETMEFFNQQ 434
           LYVGN+P   TEEE M+ F++Q
Sbjct: 516 LYVGNLPMNTTEEELMQLFSKQ 537


>UniRef50_Q9U1N0 Cluster: Hrp65 protein; n=3; Chironomus
           tentans|Rep: Hrp65 protein - Chironomus tentans (Midge)
          Length = 535

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 22/54 (40%), Positives = 27/54 (50%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           RLY+GN+   VTEEE  E F+    +S              IN +KNFAFL  D
Sbjct: 114 RLYIGNLTSDVTEEELKELFSPYGEIS-----------EAFINAEKNFAFLKID 156


>UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1851

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 21/77 (27%), Positives = 29/77 (37%)
 Frame = +2

Query: 245  YHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVF 424
            +H + + GD   G      C  HT  C A  G  YN       C+ +T   H    +  F
Sbjct: 1538 HHRVNVSGDPFYGKCIPCNCNNHTNDCYADTGLCYN-------CKHNTAGEHCELCDDGF 1590

Query: 425  QSTNASIGPGPGRRQPC 475
                A   PG  ++ PC
Sbjct: 1591 YGNAADGTPGDCKQCPC 1607



 Score = 33.1 bits (72), Expect = 4.4
 Identities = 20/77 (25%), Positives = 28/77 (36%)
 Frame = +2

Query: 245  YHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVF 424
            +H + + GD   G      C  HT  C A  G  YN       C+ +T   H    +  F
Sbjct: 1642 HHRVNVSGDPFYGKCIPCNCNNHTNDCYADTGLCYN-------CKHNTTGEHCELCDDGF 1694

Query: 425  QSTNASIGPGPGRRQPC 475
                    PG  ++ PC
Sbjct: 1695 YGNTTDGTPGDCKQCPC 1711


>UniRef50_A7PJ01 Cluster: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence; n=3; Magnoliophyta|Rep: Chromosome
           chr13 scaffold_17, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 270

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 11/22 (50%), Positives = 19/22 (86%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFFNQ 431
           R+YVGN+P+ +TE+E  +FF++
Sbjct: 133 RIYVGNLPWDITEDEVRKFFSR 154


>UniRef50_Q0ZAL3 Cluster: Splicing factor proline-and
           glutamine-rich; n=4; Endopterygota|Rep: Splicing factor
           proline-and glutamine-rich - Bombyx mori (Silk moth)
          Length = 641

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +3

Query: 228 PPGFEHITPLQYKAMQAAGQIP--ANIVADTPQAAVPVVGSTITRQAR-RLYVGNIPFGV 398
           PPG +++ P Q + +  + ++      + D P    P+  S +    R RLY+GN+   V
Sbjct: 230 PPGQDNMKPAQREEIILSNKLKDLQGPLFDLP----PMEQSEVKFNGRSRLYIGNLTNDV 285

Query: 399 TEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           TEEE M+ F+     S L            +N +KNF F+  D
Sbjct: 286 TEEEIMKMFSPFGEASELF-----------LNKEKNFGFIKMD 317


>UniRef50_A5GEF6 Cluster: RNP-1 like RNA-binding protein; n=1;
           Geobacter uraniumreducens Rf4|Rep: RNP-1 like
           RNA-binding protein - Geobacter uraniumreducens Rf4
          Length = 85

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 363 RRLYVGNIPFGVTEEETMEFFN 428
           R+L+VGN+PF  TE+   EFF+
Sbjct: 3   RKLFVGNVPFTATEDHLKEFFS 24


>UniRef50_UPI00006CBD24 Cluster: hypothetical protein
           TTHERM_00151210; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00151210 - Tetrahymena
           thermophila SB210
          Length = 554

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 360 ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPV 476
           A R+Y+GNIP  V  E+  +F  +QM  +G     GNP+
Sbjct: 216 ALRVYIGNIPDPVDVEDVCKFVFEQMANAGGLLEPGNPL 254


>UniRef50_Q2JJY2 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain JA-2-3B'a(2-13))
           (Cyanobacteria bacteriumYellowstone B-Prime)
          Length = 98

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 327 RQLVVCRRQYWQESDPPLASP-CIVMA*YARIPAAVHP 217
           RQ+V+ RRQ   E  PPL  P C+  A  A +  AVHP
Sbjct: 32  RQVVLLRRQRAGEFGPPLGDPSCVFSAHSAWLRCAVHP 69


>UniRef50_Q70JP5 Cluster: Putative DIP2 protein; n=5; BEP clade|Rep:
           Putative DIP2 protein - Triticum aestivum (Wheat)
          Length = 259

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFFNQQMHL 443
           +LYV N+ +GVT+E+  E F++  HL
Sbjct: 116 KLYVSNLHYGVTKEDLQELFSEMGHL 141


>UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Rep:
           At4g12630 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 117

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 360 ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN-FAFLNSDQ 530
           +R L+VGN+P G+ E E  + F +   L  LA   G        N D++ FA + S Q
Sbjct: 22  SRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQ 79


>UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1;
           Trypanosoma brucei|Rep: RNA-binding protein, putative -
           Trypanosoma brucei
          Length = 857

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 ITRQARRLYVGNIPFGVTEEETMEF 422
           + R++RR+ +GNIPF  TEE+  +F
Sbjct: 310 VVRESRRIRLGNIPFIATEEDVKQF 334


>UniRef50_Q4N3F2 Cluster: U2 small nuclear ribonucleoprotein,
           auxiliary factor, large subunit, putative; n=2;
           Theileria|Rep: U2 small nuclear ribonucleoprotein,
           auxiliary factor, large subunit, putative - Theileria
           parva
          Length = 380

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 354 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPV 476
           ++ +RLYVGN+P G   ++ ++FFN  +    +A   GN +
Sbjct: 53  KRQKRLYVGNLPSGTKLQDVVDFFNGAL----MAMVPGNTI 89


>UniRef50_UPI0000E47894 Cluster: PREDICTED: similar to scavenger
            receptor cysteine-rich protein type 12 precursor; n=1;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            scavenger receptor cysteine-rich protein type 12
            precursor - Strongylocentrotus purpuratus
          Length = 2255

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 209  ALLGCTAAGIRAYHAITIQGDASGGSD-SCQYCRRHTTSCRAGGGFDYNTSSAK 367
            A + C+  G+R   +    G  +  SD SCQ CR H  +C+     DY+ S+ K
Sbjct: 1041 AAIQCSGPGLRECTSECPLGFYTSQSDRSCQPCRVHCQTCQQAISSDYSCSACK 1094


>UniRef50_UPI00006CBE3B Cluster: hypothetical protein
           TTHERM_00318730; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00318730 - Tetrahymena
           thermophila SB210
          Length = 459

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 363 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDET 542
           R+LY+GNIP G+   +     N  +    + Q  G+  ++  I+ + N+ F      DE 
Sbjct: 203 RKLYIGNIPPGLQPVKCQLMINSALKQLKVNQEPGDSCVSIWISPEGNYGFAEFRTPDEA 262

Query: 543 TQ 548
           T+
Sbjct: 263 TK 264


>UniRef50_Q7ZUX2 Cluster: Cstf2 protein; n=2; Danio rerio|Rep: Cstf2
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 339

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 321 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
           AA       + R  R ++VGNIP+  TEE+  + F++
Sbjct: 10  AAAAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 46


>UniRef50_Q9VHP3 Cluster: CG8021-PA; n=3; Diptera|Rep: CG8021-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 91

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = +3

Query: 336 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF 515
           + S   R + +L+VGN+P+ +  +E   +F++  H+     A    V   Q+ L K++ F
Sbjct: 1   MSSGFVRSSYKLFVGNLPWTIGSKELRTYFSKYGHV-----ANAEVVFDRQLGLSKHYGF 55

Query: 516 LNSDQFD 536
           +   Q D
Sbjct: 56  VVFSQRD 62


>UniRef50_A7AU39 Cluster: RNA recognition motif (RRM)-containing
           protein; n=1; Babesia bovis|Rep: RNA recognition motif
           (RRM)-containing protein - Babesia bovis
          Length = 383

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 339 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHL 443
           G    ++ RRLY+GN+P G T +  +EF +  + L
Sbjct: 51  GDDNKKRHRRLYIGNLPSGTTYKALVEFLSAALRL 85


>UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845
           Schizosaccharomyces pombe Putative splicing factor; n=1;
           Yarrowia lipolytica|Rep: Similarities with tr|O13845
           Schizosaccharomyces pombe Putative splicing factor -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 621

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFF 425
           RLYVGNI FGVTE E ++ F
Sbjct: 447 RLYVGNIYFGVTEGEIIQIF 466


>UniRef50_Q00880 Cluster: Cutinase negative acting protein; n=2;
           Sordariomycetes|Rep: Cutinase negative acting protein -
           Nectria haematococca
          Length = 507

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 255 LQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
           L Y   + A   PA   AD  +      G T++ ++  L+VGN+P  V ++   EFF +
Sbjct: 324 LDYANARPADANPAGRAADRAKRH----GDTLSPESDTLFVGNLPIDVDQDAVREFFGE 378


>UniRef50_A6SSI6 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 322

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +3

Query: 345 TITRQARRLYVGNIPFGVTEEETMEFFN 428
           +I   ++ ++VGNIP+G+TEE+ ++ F+
Sbjct: 2   SIKPPSKSVFVGNIPYGLTEEQIIDIFS 29


>UniRef50_Q04047 Cluster: Protein no-on-transient A; n=61;
           Diptera|Rep: Protein no-on-transient A - Drosophila
           melanogaster (Fruit fly)
          Length = 700

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +3

Query: 366 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSD 527
           RLYVGN+   +T++E  E F     +S +             NLDKNF FL  D
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVD 345


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,611,462
Number of Sequences: 1657284
Number of extensions: 10884476
Number of successful extensions: 30696
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 29572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30676
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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