Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1067
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 49 2e-06
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 48 5e-06
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 38 0.004
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 37 0.012
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 0.61
08_02_0269 + 15087481-15087893,15087978-15088074,15089068-150891... 30 1.1
05_03_0023 + 7457836-7457976,7458313-7458480 30 1.1
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 30 1.1
01_06_0833 + 32296957-32297256,32299257-32299895 30 1.1
08_01_0118 + 947394-947885,948709-948810,948914-949219,949557-94... 30 1.4
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 30 1.4
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 29 1.8
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 29 2.4
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 28 4.3
08_02_0651 - 19714348-19714395,19715319-19715429,19715503-197155... 28 4.3
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 28 4.3
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 28 5.6
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 28 5.6
07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 28 5.6
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 28 5.6
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 5.6
02_05_0055 + 25453699-25453830,25454157-25454269,25454686-254549... 28 5.6
12_01_0705 + 6065932-6066061,6066150-6066883,6066962-6067423,606... 27 7.5
11_06_0425 - 23365108-23366028,23366182-23366340,23366445-233666... 27 7.5
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 27 7.5
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 27 7.5
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 7.5
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 27 7.5
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 27 7.5
01_06_0202 + 27483503-27483543,27484567-27485311 27 7.5
01_03_0047 + 11939747-11939857,11940058-11940121,11940123-119402... 27 7.5
09_02_0560 - 10679432-10680502 27 9.9
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 27 9.9
07_03_1760 - 29289997-29290377,29290539-29290755,29291152-292939... 27 9.9
07_03_1654 - 28416487-28416548,28416791-28416824,28418156-284182... 27 9.9
07_03_1061 + 23651404-23651625,23651764-23652954 27 9.9
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 27 9.9
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 27 9.9
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 27 9.9
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +3
Query: 231 PGFEHI-TPLQYKAMQAAGQ----IPANIVADTPQAAVP-VVGSTITRQARRLYVGNIPF 392
P F I TP Q+ G +P + P P + TR ARR+YVG +P
Sbjct: 176 PQFPAIPTPSQFPGTAIPGMFPNMLPMGVGQFNPLVIQPQAMTQQATRHARRVYVGGLPP 235
Query: 393 GVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDETT 545
E+ +FNQ M + G G+ VL IN DK FAF+ +E +
Sbjct: 236 TANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 287
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 48.0 bits (109), Expect = 5e-06
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 279 AGQIPA--NIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSG 449
+G +P N+ PQA TR ARR+YVG +P E +FNQ M + G
Sbjct: 205 SGMLPNMFNLTQTPPQAMT----QQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGG 260
Query: 450 LAQAAGNPVLACQINLDKNFAFLNSDQFDETT 545
G+ VL IN DK FAF+ +E +
Sbjct: 261 NTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 292
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 309 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 455
D + ++ G ++T + +LY+ N+ +GVT+E+ E F++ HL A
Sbjct: 70 DLFEDSMVAAGLSVTESSTKLYISNLHYGVTKEDIQELFSEMGHLKHCA 118
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 351 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA--QAAGNPVLACQINLDKNFAFL 518
TR RRL++ N+P TE+ + N+ + S + Q + P L+C IN DK AF+
Sbjct: 470 TRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFV 527
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 273 QAAGQIPANIVADTPQAAVPVVGSTITRQA---RRLYVGNIPFGVTEEETMEFFNQ 431
+ A + +N A P P ++ QA + L+VGN+P+ V +E+ +FF +
Sbjct: 437 ETAVSVGSNKSATKPGQEEPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE 492
>08_02_0269 + 15087481-15087893,15087978-15088074,15089068-15089112,
15089281-15089492,15090809-15090911,15091002-15091097,
15091405-15091473,15093341-15093588,15093640-15093759,
15093847-15094284,15094503-15094620,15095262-15095303,
15097099-15097161,15097365-15097475,15097730-15097801,
15097875-15097993,15099682-15099745,15100238-15101860
Length = 1350
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 223 YRRRDSSISRHYNTRRCKRRVRFLPILSPTHHKLP 327
YRRRDS H ++ R R++P L T+H++P
Sbjct: 1292 YRRRDSFDWEHRSSARGTVTDRYVPDLEQTNHQIP 1326
>05_03_0023 + 7457836-7457976,7458313-7458480
Length = 102
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 366 RLYVGNIPFGVTEEETMEFF 425
R+YVGN+P+ V E+ M++F
Sbjct: 19 RVYVGNLPYSVDEQTLMDYF 38
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 330 PVVGSTITRQARRLYVGNIPFGVTEEETMEFF 425
PV+ + A+++YVG IP+ +E++ FF
Sbjct: 163 PVLSEESEKNAKKVYVGGIPYYSSEDDIRSFF 194
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 366 RLYVGNIPFGVTEEETMEFFN 428
R+YVGN+ + +TE++ +FF+
Sbjct: 268 RVYVGNLAWDITEDDLKKFFS 288
>01_06_0833 + 32296957-32297256,32299257-32299895
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 357 QARRLYVGNIPFGVTEEETMEFFNQ 431
Q R+++VG +P TE++ E+FN+
Sbjct: 122 QKRKIFVGGLPVSATEKKLKEYFNK 146
>08_01_0118 +
947394-947885,948709-948810,948914-949219,949557-949616
Length = 319
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 330 PVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
P V I ++YVGNI + V +E E+F+Q
Sbjct: 226 PPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQ 259
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 303 VADTPQAAVPVVGSTITRQ---ARRLYVGNIPFGVTEEETMEFFN 428
VA Q P S+ +++ AR +YVGN+ + T EE + FN
Sbjct: 59 VAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHFN 103
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 360 ARRLYVGNIPFGVTEEETMEFF 425
AR+LYVGNIP VT +E F
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMF 90
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 252 PLQYKAMQAAGQIPANIVADTPQAAVPV--VGSTITRQARRLYVGNIPFGVTEEETMEFF 425
P Q + +AAG+ ++ ++ ++A VG + + L+VGN+P E++ M F
Sbjct: 7 PPQPQPQEAAGREASSSLSPAKESAAGGGGVGGSGAPETNTLWVGNLPAQAAEDDVMASF 66
Query: 426 NQQMHLSGLAQAAG 467
+ L + AG
Sbjct: 67 SPHGALDCVMARAG 80
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 354 RQARRLYVGNIPFGVTEEETMEFFN 428
R RLYVGN+ F V+E + ++ F+
Sbjct: 866 RSESRLYVGNLDFRVSESDIIKMFS 890
>08_02_0651 -
19714348-19714395,19715319-19715429,19715503-19715572,
19716081-19716178,19716272-19716319,19716391-19716446,
19718191-19718314,19718417-19718506
Length = 214
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 369 LYVGNIPFGVTEEETMEFFNQ 431
LY+G+IP G EE+ FF Q
Sbjct: 56 LYIGHIPHGFYEEQMQGFFQQ 76
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 258 QYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
Q A+ G P + A V V A+ LYVG++ VT+ + E F+Q
Sbjct: 4 QMAAVAVNGGSPGAVTAAAAAGGVGVAVGLGGGGAQSLYVGDLEASVTDSQLYELFSQ 61
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 339 GSTITRQARRLYVGNIPFGVTEEETMEFF 425
G + AR+LYVGN+ +TE++ + F
Sbjct: 282 GGIASGGARKLYVGNLHSNITEDQLRQVF 310
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 291 PANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
PA + + P + ++ L++GN+ F + +++ EFF +
Sbjct: 287 PAATKSQNDEPKTPASNQSQGTESATLFMGNLSFNLNQDQVKEFFQE 333
>07_03_0507 -
18871260-18871361,18871444-18871560,18871792-18872120,
18872704-18872871,18873592-18873685,18873707-18873766,
18874702-18874762,18875258-18875319,18875729-18875856,
18876783-18876852,18877472-18877630
Length = 449
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 285 QIPANIVADTPQAAVP--VVGSTITRQARRLYVGNIP 389
QI N++ DT + P ++G TITR A LY+ P
Sbjct: 299 QIVTNVIRDTRKPLHPQYILGMTITRLAIPLYIFGCP 335
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 267 AMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFF 425
A+ I + +P A++ V +T RLY+ N+P +T ++ + F
Sbjct: 481 ALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 533
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 360 ARRLYVGNIPFGVTEEETMEF 422
AR+LYVGN+ +TE++ +F
Sbjct: 286 ARKLYVGNLHSNITEDQLRQF 306
>02_05_0055 +
25453699-25453830,25454157-25454269,25454686-25454942,
25455480-25456297
Length = 439
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 312 TPQAAVPVVGSTITRQARRLYVGNIPFGVTEEE-TMEFFNQQMHLSGLA--QAAGNPVL 479
TP + +T + R+Y+ NI FG EE TM+ F SG + Q +PVL
Sbjct: 336 TPNVMICPYDFPLTEKDMRVYIPNITFGGEEEPVTMKRFGSFWFKSGRSGNQEGESPVL 394
>12_01_0705 +
6065932-6066061,6066150-6066883,6066962-6067423,
6067505-6068337,6068420-6068590,6068670-6068919,
6069367-6069405,6069598-6069672
Length = 897
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 225 PPPGFEH-ITPLQYKAMQAAGQIPANIVADTPQAAV 329
P PG +H +P Q+++ A+ ++PA + P AAV
Sbjct: 403 PTPGVQHDASPSQHRSSCASTEVPAPALPIAPLAAV 438
>11_06_0425 -
23365108-23366028,23366182-23366340,23366445-23366640,
23366995-23367527,23367817-23368272,23368507-23368758,
23368890-23369007,23369836-23369993
Length = 930
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 421 NSIVSSSVTPKGMLPTYNLRA*RVIVEPTTGTAACGVSATI----LAG---I*PAACIAL 263
+ ++ ++ KG + + A + E A CG T +AG + A C A
Sbjct: 650 SKLIGGAIAQKGAISEPDTAAMAMSAETVAAPANCGTCGTACDSNMAGDKVVAAARCKAA 709
Query: 262 YCNGVICSNPGGGTSQ 215
C V S GGG ++
Sbjct: 710 RCKAVAASGGGGGQAE 725
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 345 TITRQARRLYVGNIPFGVTEEE 410
++++ RL+VGN+P G+ EEE
Sbjct: 178 SLSQAKHRLFVGNVPKGLGEEE 199
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +3
Query: 345 TITRQARRLYVGNIPFGVTEEE 410
++++ RL+VGN+P G++E+E
Sbjct: 183 SLSQAKHRLFVGNVPKGLSEDE 204
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 354 RQARRLYVGNIPFGVTEEETMEFF 425
R +R +YVGN+P + E E + F
Sbjct: 4 RNSRTIYVGNLPGDIREREVEDLF 27
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 324 AVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
AVP V + LYVG++ V EE +E F +
Sbjct: 13 AVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGK 48
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 366 RLYVGNIPFGVTEEETMEFFNQ 431
+LY+ N+ FGV+ E+ E F++
Sbjct: 107 KLYISNLDFGVSTEDIKELFSE 128
>01_06_0202 + 27483503-27483543,27484567-27485311
Length = 261
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 224 TAAGIRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGG 340
T G R+ A T+ G GS RR C AGGG
Sbjct: 191 TRKGGRSSGATTVAGHERSGSGGRGRGRRRVVRCTAGGG 229
>01_03_0047 +
11939747-11939857,11940058-11940121,11940123-11940253,
11940325-11940432,11942735-11942783,11943188-11943279,
11944394-11944468,11944553-11944658,11944740-11944786,
11944856-11944913,11945299-11945348,11945728-11945784,
11945909-11945916,11946020-11946055,11946904-11946937,
11947030-11947092,11947223-11947237
Length = 367
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 354 RQARRLYVGNIPFGVTEEETMEFF 425
R +R +YVGN+P + E E + F
Sbjct: 160 RNSRTIYVGNLPGDIREREVEDLF 183
>09_02_0560 - 10679432-10680502
Length = 356
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 332 GGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGP-GPGRRQPCFGLPD 490
GGG D + S+ +VIC + L+ R+ GV + S G G G R P + D
Sbjct: 120 GGGGDISLSNFRVICALYDLYWLNNRHIGVQLACVFSSGSHGGGWRLPKSAVAD 173
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 369 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLNSDQFDE 539
LYV + VTEE+ +FF+++ G Q+ + VL + + FAF+ D D+
Sbjct: 85 LYVTGLSTRVTEEDLEKFFSKE----GKVQSC-HVVLDPRTKESRGFAFVTMDSVDD 136
>07_03_1760 -
29289997-29290377,29290539-29290755,29291152-29293953,
29294134-29294178,29294274-29294358,29294791-29294875,
29296429-29296530,29296747-29296851,29296940-29297029,
29297163-29297258
Length = 1335
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 196 DVSLRFTGMYRRRDSSISRHYNTRRCKRRVRFLPILSPT 312
+ +LR TG + +S YN RRC++ V L PT
Sbjct: 449 EANLRLTGNAASKKNSQVLSYNRRRCRKSVSPEANLKPT 487
>07_03_1654 -
28416487-28416548,28416791-28416824,28418156-28418212,
28418401-28418450,28418968-28419025,28419136-28419182,
28419278-28419377,28419446-28419586,28419715-28419780,
28420024-28420118,28420440-28420629
Length = 299
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 339 GSTITRQARRLYVGNIPFGVTEEETMEFF 425
G R +R +YVGN+P + E E + F
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLF 93
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 264 KAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 431
+ ++A +P + + T + +GS + R+++VG + VTE E +F Q
Sbjct: 73 RMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQ 128
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 363 RRLYVGNIPFGVTEEETMEFFNQ 431
R LYV N+PF ++ EE + F +
Sbjct: 19 RVLYVRNLPFNISSEEMYDIFGK 41
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 360 ARRLYVGNIPFGVTEEETMEFF 425
AR +YVGN+ + T EE + F
Sbjct: 89 ARSVYVGNVDYACTPEEVQQHF 110
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 357 QARRLYVGNIPFGVTEEETMEFFN 428
+ R+++VG +P +TE+E E F+
Sbjct: 153 KTRKIFVGGLPSSLTEDELREHFS 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,086,648
Number of Sequences: 37544
Number of extensions: 338156
Number of successful extensions: 1018
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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