Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1061
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 117 4e-27
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 111 3e-25
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 82 2e-16
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 78 4e-15
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 77 7e-15
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 62 7e-15
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 77 1e-14
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 60 4e-14
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 72 3e-13
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 72 3e-13
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 72 3e-13
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 66 1e-11
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 66 1e-11
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 62 2e-10
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 62 2e-10
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 52 2e-09
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 56 1e-08
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 55 3e-08
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 53 1e-07
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 51 5e-07
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 1.9
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 3.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 3.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 4.4
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 27 5.8
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 27 5.8
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 27 5.8
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 27 5.8
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 27 5.8
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 27 5.8
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 27 7.6
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 27 7.6
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 27 7.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 7.6
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 117 bits (282), Expect = 4e-27
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +2
Query: 257 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 436
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 437 KYDSRKSKTYVANGTQFAIQY 499
+YDS+ S TY +G + AIQY
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQY 157
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 111 bits (267), Expect = 3e-25
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
Frame = +2
Query: 128 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 289
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 290 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 469
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS +
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 470 ANGTQFAIQY 499
A G F IQY
Sbjct: 123 ATGASFEIQY 132
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 82.2 bits (194), Expect = 2e-16
Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 304
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 305 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQ 484
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS T+ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 485 FAIQY 499
+ IQY
Sbjct: 124 WQIQY 128
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +2
Query: 260 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 439
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 440 YDSRKSKTYVANGTQFAIQY 499
+DS KS T+ NG + IQY
Sbjct: 114 FDSSKSTTFKKNGQSWQIQY 133
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 77.0 bits (181), Expect = 7e-15
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +2
Query: 272 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 451
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 452 KSKTYVANGTQFAIQY 499
KS T+ ANG + IQY
Sbjct: 118 KSSTFKANGKPWQIQY 133
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 62.5 bits (145), Expect(2) = 7e-15
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +2
Query: 101 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 259
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 260 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 403
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 34.7 bits (76), Expect(2) = 7e-15
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 404 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQY 499
+YT+ +C NK+D+ KS +Y NG F I+Y
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEY 374
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +2
Query: 275 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 454
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 455 SKTYVANGTQFAIQY 499
S T+V NG + IQY
Sbjct: 117 SSTFVKNGKSWTIQY 131
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 60.1 bits (139), Expect(2) = 4e-14
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 289
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 290 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 403
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
Score = 34.7 bits (76), Expect(2) = 4e-14
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 404 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQY 499
+YT+ +C NK+D+ KS +Y NG F I+Y
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEY 168
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 71.7 bits (168), Expect = 3e-13
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 304
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 305 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 469
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 470 ANGTQFAIQY 499
+F+IQY
Sbjct: 127 KETRKFSIQY 136
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 71.7 bits (168), Expect = 3e-13
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 304
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 305 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 469
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 470 ANGTQFAIQY 499
+F+IQY
Sbjct: 127 KETRKFSIQY 136
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 71.7 bits (168), Expect = 3e-13
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 304
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 305 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 469
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 470 ANGTQFAIQY 499
+F+IQY
Sbjct: 127 KETRKFSIQY 136
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 66.5 bits (155), Expect = 1e-11
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 113 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 289
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 290 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 448
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASC--DNMFCNGWIGSNYTRQKFDT 116
Query: 449 RKSKTYVANGTQFAIQY 499
KS ++ +F+IQY
Sbjct: 117 SKSSSFSRENRKFSIQY 133
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 66.5 bits (155), Expect = 1e-11
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 131 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 298
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 299 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKT 463
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 464 YVANGTQFAIQY 499
+V +F+IQY
Sbjct: 124 FVKETRKFSIQY 135
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 62.5 bits (145), Expect = 2e-10
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 316
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 317 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 484
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 485 FAIQY 499
F IQY
Sbjct: 125 FNIQY 129
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 299 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 469
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 470 ANGTQFAIQY 499
F+ +Y
Sbjct: 511 EGNRTFSTEY 520
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 62.5 bits (145), Expect = 2e-10
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 316
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 317 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 484
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 485 FAIQY 499
F IQY
Sbjct: 125 FNIQY 129
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 299 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 469
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 470 ANGTQFAIQY 499
F+ +Y
Sbjct: 511 EGNRTFSTEY 520
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 62.1 bits (144), Expect = 2e-10
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Frame = +2
Query: 128 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 295
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 296 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSK 460
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 461 TYVANGTQFAIQY 499
T+V +F+IQY
Sbjct: 124 TFVKGTRRFSIQY 136
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +2
Query: 251 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 415
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 416 --IACLLHNKYDSRKSKTYVANGTQFAIQY 499
AC KY S +Y +GT F+I Y
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISY 136
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 51.6 bits (118), Expect(2) = 2e-09
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 170 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 346
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 347 FKVVFDTGSSNLWVPSKKC 403
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
Score = 27.1 bits (57), Expect(2) = 2e-09
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 410 TNIACLLHNKYDSRKSKTYVANGTQFAIQY 499
T AC ++++S S +YV NG +F + Y
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTY 173
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 56.4 bits (130), Expect = 1e-08
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Frame = +2
Query: 113 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 289
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 290 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 448
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 449 RKSKTYVANGTQFAIQY 499
KS ++V +F I Y
Sbjct: 117 NKSSSFVDLNRKFFINY 133
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 466
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 467 VANGTQFAIQY 499
+A + I+Y
Sbjct: 122 IATNRPWQIKY 132
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/121 (29%), Positives = 55/121 (45%)
Frame = +2
Query: 137 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 316
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 317 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQFAIQ 496
+ IGTP Q F+V DT SSNLWV +C + +Y+ S T++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 497 Y 499
+
Sbjct: 125 F 125
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 50.8 bits (116), Expect = 5e-07
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = +2
Query: 116 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 292
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 293 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSKT 463
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S T
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 464 YVANGTQFAIQY 499
+VA + F + Y
Sbjct: 208 FVAGTSSFNLPY 219
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 492 IANWVPFATYVLDLRLSYLLCSKQ 421
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 392 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 234
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 482 GCHSRRTSWTCGCRTCCAANKRCWCS 405
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPKCCCCCRRCCTCCRTCCCT 109
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 482 GCHSRRTSWTCGCRTCCAANKRCWCS 405
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 482 GCHSRRTSWTCGCRTCCAANKRCWCS 405
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 482 GCHSRRTSWTCGCRTCCAANKRCWCS 405
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 482 GCHSRRTSWTCGCRTCCAANKRCWCS 405
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 461 SWTCGCRTCCAANKRCWCSGTF 396
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -2
Query: 431 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 252
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 251 LISTAPVQ 228
LI +Q
Sbjct: 250 LIKALTIQ 257
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 272 KGQSHRILISTAPVQCQPHESGFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAA 93
+ Q I ++T PV GFS+F Y V + W+ ++I+ F L LE +
Sbjct: 932 ENQKSIISLTTRPVVFLRFP-GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVS 990
Query: 92 TR 87
TR
Sbjct: 991 TR 992
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 103
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 125 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 174
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 103
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 199 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 248
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 103
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 235 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 284
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 103
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 242 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 291
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 103
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 250 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 299
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 209 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 87
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 209 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 87
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 209 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 87
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -2
Query: 473 SRRTSWTCGCRTCCAANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACR 327
+RR +CGC C R CS + + + + C PP C+
Sbjct: 35 TRRKRCSCGCSGCDLFPNRSCCSSSCCSSQKPIPLACCPPPPPPKPCCQ 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,565,222
Number of Sequences: 27780
Number of extensions: 247076
Number of successful extensions: 676
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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