Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1061
(501 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.44
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.59
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.77
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 24 0.77
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 23 2.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 7.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.5
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.44
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 452 CGCRTCCAANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAAC 330
C C+TC + K C+ P + + R+PP T C
Sbjct: 435 CECKTCNSKTKCCFAQDD-GLCPYTLKHKIRVPPGTPIYEC 474
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.59
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 374 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 475
SN + P CH +IAC + K D R KT N
Sbjct: 354 SNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEEN 390
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.77
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 374 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 475
SN + P CH +IAC + K D R KT N
Sbjct: 354 SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 390
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 24.2 bits (50), Expect = 0.77
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 374 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 475
SN + P CH +IAC + K D R KT N
Sbjct: 65 SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 101
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +2
Query: 95 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 202
R+++ +GK+ + + + V++LY P+ + A
Sbjct: 76 RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 116 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPL 286
GK+++ + S + ++ V L + VG +E+ K DVTG P PL
Sbjct: 289 GKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGDNVEI---KCDVTGTPPPPL 342
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 107 TNYKKLQYYNIINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 287 SNYLDAQYYGVISIGTPP 340
+NY QYY +I+I P
Sbjct: 103 TNYKKLQYYNIINIEQIP 120
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = +3
Query: 42 NKSINNNSQFLISKSPSCGF*KQQWERYLYF 134
NK+I+NN+ + + + + + + LY+
Sbjct: 87 NKTIHNNNNYKYNYNNKYNYNNNNYNKKLYY 117
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 367 GVEYHLERLRRRADTDHSVVL 305
G E+HL+ + + T +SVV+
Sbjct: 1037 GKEHHLQIMNLKTYTQYSVVV 1057
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,803
Number of Sequences: 438
Number of extensions: 3464
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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