Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1057
         (346 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   0.79 
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    23   2.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   4.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   7.4  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   7.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   7.4  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +1

Query: 172 FPNESEKNGKCSSAEYKLEGDVVKVKN 252
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +1

Query: 85  YSRRHLPRAETGNNFNLTAYQGIWYEISKFPNE 183
           Y +  +P     N+F L   +G+W +++K  ++
Sbjct: 469 YEKTSIPMKFITNSFILGPREGLWLKVNKLESK 501


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 88  SRRHLPRAETGNNFNLTAY 144
           S R LP   TGNN   +AY
Sbjct: 808 SERMLPSGATGNNSTNSAY 826


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 237 GEGQERAYHRRRQEVYRRDGK 299
           G G +R  +RR ++ YR +GK
Sbjct: 604 GGGYDRDDYRRTEKDYRGNGK 624


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 240 EGQERAYHRRRQEVYRRDGKLTDDA 314
           E QERA    +Q + + DGKL+ +A
Sbjct: 328 EVQERARECVKQTLQKYDGKLSYEA 352


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 121 NNFNLTAYQGIWYEISKFPNESE 189
           NNF +++YQ +    S +PN S+
Sbjct: 4   NNFVMSSYQFVNSIASCYPNNSQ 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,214
Number of Sequences: 2352
Number of extensions: 5024
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)