BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1057 (346 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 50 3e-06 J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 50 3e-06 CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 50 3e-06 CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 50 3e-06 BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 50 3e-06 BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 50 3e-06 BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 50 3e-06 BC139923-1|AAI39924.1| 467|Homo sapiens ATRNL1 protein protein. 28 9.0 BC139916-1|AAI39917.1| 467|Homo sapiens ATRNL1 protein protein. 28 9.0 BC047716-1|AAH47716.1| 467|Homo sapiens ATRNL1 protein protein. 28 9.0 BC028601-1|AAH28601.1| 1159|Homo sapiens SLC4A2 protein protein. 28 9.0 AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein ... 28 9.0 AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein. 28 9.0 AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein. 28 9.0 AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein. 28 9.0 AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein. 28 9.0 AL355530-2|CAI13482.1| 476|Homo sapiens attractin-like 1 protein. 28 9.0 AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein. 28 9.0 AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens ... 28 9.0 >M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. Length = 189 Score = 49.6 bits (113), Expect = 3e-06 Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +1 Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI-IDGVK 276 P NF++ Y G WYEI K P E NG+C A Y L E +KV N + DG Sbjct: 29 PNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQELRADGTV 87 Query: 277 KYIEGTAS 300 IEG A+ Sbjct: 88 NQIEGEAT 95 >BC139923-1|AAI39924.1| 467|Homo sapiens ATRNL1 protein protein. Length = 467 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >BC139916-1|AAI39917.1| 467|Homo sapiens ATRNL1 protein protein. Length = 467 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >BC047716-1|AAH47716.1| 467|Homo sapiens ATRNL1 protein protein. Length = 467 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >BC028601-1|AAH28601.1| 1159|Homo sapiens SLC4A2 protein protein. Length = 1159 Score = 27.9 bits (59), Expect = 9.0 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Frame = +1 Query: 28 IQNAEASATDSA---CGGDC*SYSRRHLPRAETGN-NFNL 135 ++ AEA A A GGD S RHLP+A+ G+ ++NL Sbjct: 114 VEEAEAEAVAVASGTAGGDDGGASGRHLPKAQPGHRSYNL 153 >AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL355530-2|CAI13482.1| 476|Homo sapiens attractin-like 1 protein. Length = 476 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein. Length = 1379 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 197 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 224 >AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens cDNA FLJ45344 fis, clone BRHIP3010289, moderately similar to Attractin precursor. ). Length = 1233 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 127 FNLTAYQGIWYEISKFPNESEKNGKCSSA 213 +NLT + I+Y I+ PN +GKC+++ Sbjct: 51 YNLTGFN-IFYSINSCPNNCSGHGKCTTS 78 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 42,057,674 Number of Sequences: 237096 Number of extensions: 720813 Number of successful extensions: 1470 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1470 length of database: 76,859,062 effective HSP length: 80 effective length of database: 57,891,382 effective search space used: 1968306988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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