Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1057
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p pro...    38   0.005
AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural Lazar...    38   0.005
AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA...    38   0.005
AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-P...    34   0.057
BT023404-1|AAY55820.1|  218|Drosophila melanogaster GH25158p pro...    27   5.0  
AE014297-2067|AAF55214.1|  218|Drosophila melanogaster CG5399-PA...    27   5.0  
AE014297-1062|AAN13447.1|  397|Drosophila melanogaster CG31405-P...    27   5.0  
BT023584-1|AAY84984.1|  291|Drosophila melanogaster IP09423p pro...    27   8.7  
AE014296-1944|AAF50069.1|  291|Drosophila melanogaster CG11726-P...    27   8.7  

>AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p
           protein.
          Length = 224

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI 261
           P  +  + F+  AY G+WYE + +P   E   KC  A Y L +   V V N  I
Sbjct: 34  PDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNAAI 87


>AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural
           Lazarillo protein.
          Length = 224

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI 261
           P  +  + F+  AY G+WYE + +P   E   KC  A Y L +   V V N  I
Sbjct: 34  PDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNAAI 87


>AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA
           protein.
          Length = 224

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 103 PRAETGNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNVHI 261
           P  +  + F+  AY G+WYE + +P   E   KC  A Y L +   V V N  I
Sbjct: 34  PDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVNAAI 87


>AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-PA,
           isoform A protein.
          Length = 219

 Score = 33.9 bits (74), Expect = 0.057
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +1

Query: 124 NFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKVKNVHIIDGVKKYIEGTASS 303
           NFNLT   G WYE ++ PN         S   ++E D++ + +++ I  V    + T  S
Sbjct: 47  NFNLTQLSGYWYEAARVPNVQVLECLNVSVPAEIENDILSL-DLNFISTVNNGWQFTEES 105

Query: 304 PTMP 315
              P
Sbjct: 106 VEFP 109


>BT023404-1|AAY55820.1|  218|Drosophila melanogaster GH25158p
           protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 115 TGNNFNLTAYQGIWYEISKFP 177
           TG +FN TA+ G W E+++ P
Sbjct: 36  TGISFNQTAFSGQWVELARNP 56


>AE014297-2067|AAF55214.1|  218|Drosophila melanogaster CG5399-PA
           protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 115 TGNNFNLTAYQGIWYEISKFP 177
           TG +FN TA+ G W E+++ P
Sbjct: 36  TGISFNQTAFSGQWVELARNP 56


>AE014297-1062|AAN13447.1|  397|Drosophila melanogaster CG31405-PA
           protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -1

Query: 178 WEISRFHTR--CLGKLSS*SCSRFQ 110
           WEI R HTR  CL  L+S  CS F+
Sbjct: 235 WEIERLHTRFQCLIDLTSEVCSIFR 259


>BT023584-1|AAY84984.1|  291|Drosophila melanogaster IP09423p
           protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 131 LKLFPVSARGRCLRE*LQQSPPQAESVALASAF 33
           LK+  +  RGRCL   + Q PP+  + A    F
Sbjct: 140 LKMDKLKCRGRCLMAKIGQLPPEPPTKAAGDGF 172


>AE014296-1944|AAF50069.1|  291|Drosophila melanogaster CG11726-PA
           protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 131 LKLFPVSARGRCLRE*LQQSPPQAESVALASAF 33
           LK+  +  RGRCL   + Q PP+  + A    F
Sbjct: 140 LKMDKLKCRGRCLMAKIGQLPPEPPTKAAGDGF 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,388,434
Number of Sequences: 53049
Number of extensions: 241466
Number of successful extensions: 546
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)