BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1054 (627 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY358810-1|AAQ89170.1| 232|Homo sapiens macrophage antigen h pr... 33 0.83 AK128243-1|BAC87350.1| 232|Homo sapiens protein ( Homo sapiens ... 33 0.83 DQ368812-1|ABC96323.1| 276|Homo sapiens C-type lectin domain fa... 32 1.9 AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 30 5.8 BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain contai... 30 7.7 BC028057-1|AAH28057.1| 933|Homo sapiens DENND4A protein protein. 30 7.7 AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein pr... 30 7.7 AK091368-1|BAC03648.1| 928|Homo sapiens protein ( Homo sapiens ... 30 7.7 AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding ... 30 7.7 >AY358810-1|AAQ89170.1| 232|Homo sapiens macrophage antigen h protein. Length = 232 Score = 33.1 bits (72), Expect = 0.83 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +3 Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287 N +N++M EE SSL R Q A KL ++ I+ S H CN C ++W Sbjct: 98 NSNNLSMEEEFLKSQISSLLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147 >AK128243-1|BAC87350.1| 232|Homo sapiens protein ( Homo sapiens cDNA FLJ46377 fis, clone TESTI4052598. ). Length = 232 Score = 33.1 bits (72), Expect = 0.83 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +3 Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287 N +N++M EE SSL R Q A KL ++ I+ S H CN C ++W Sbjct: 98 NSNNLSMEEEFLKSQISSLLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147 >DQ368812-1|ABC96323.1| 276|Homo sapiens C-type lectin domain family 12 member B protein. Length = 276 Score = 31.9 bits (69), Expect = 1.9 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287 N +N++M EE SS+ R Q A KL ++ I+ S H CN C ++W Sbjct: 98 NSNNLSMEEEFLKSQISSVLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147 >AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to ELONGATION FACTOR 2. ). Length = 857 Score = 30.3 bits (65), Expect = 5.8 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Frame = +3 Query: 123 ENEDNINMSEESTSEPNSSLPYRSYQTQKSAHKL--FKKKILQNSFGHAC-NVCDRLWFL 293 EN D I E+ TS N QK+ K+ FK K+ Q+ G N+ D++W Sbjct: 505 ENSDLIRSMEQLTSSLNEGENTHMIH-QKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSF 563 Query: 294 EDLKCG 311 KCG Sbjct: 564 GPRKCG 569 >BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain containing 4A protein. Length = 1863 Score = 29.9 bits (64), Expect = 7.7 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293 N +S PNS LP R+ Q KSAHK+ K+ C + C LWF+ Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774 >BC028057-1|AAH28057.1| 933|Homo sapiens DENND4A protein protein. Length = 933 Score = 29.9 bits (64), Expect = 7.7 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293 N +S PNS LP R+ Q KSAHK+ K+ C + C LWF+ Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774 >AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein protein. Length = 1831 Score = 29.9 bits (64), Expect = 7.7 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293 N +S PNS LP R+ Q KSAHK+ K+ C + C LWF+ Sbjct: 688 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 742 >AK091368-1|BAC03648.1| 928|Homo sapiens protein ( Homo sapiens cDNA FLJ34049 fis, clone FCBBF3000110, weakly similar to CRAG protein. ). Length = 928 Score = 29.9 bits (64), Expect = 7.7 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293 N +S PNS LP R+ Q KSAHK+ K+ C + C LWF+ Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774 >AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding protein IRLB protein. Length = 1865 Score = 29.9 bits (64), Expect = 7.7 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293 N +S PNS LP R+ Q KSAHK+ K+ C + C LWF+ Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,474,693 Number of Sequences: 237096 Number of extensions: 1566687 Number of successful extensions: 6661 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 6587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6661 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6804036910 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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