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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1054
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358810-1|AAQ89170.1|  232|Homo sapiens macrophage antigen h pr...    33   0.83 
AK128243-1|BAC87350.1|  232|Homo sapiens protein ( Homo sapiens ...    33   0.83 
DQ368812-1|ABC96323.1|  276|Homo sapiens C-type lectin domain fa...    32   1.9  
AK023181-1|BAB14450.1|  857|Homo sapiens protein ( Homo sapiens ...    30   5.8  
BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain contai...    30   7.7  
BC028057-1|AAH28057.1|  933|Homo sapiens DENND4A protein protein.      30   7.7  
AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein pr...    30   7.7  
AK091368-1|BAC03648.1|  928|Homo sapiens protein ( Homo sapiens ...    30   7.7  
AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding ...    30   7.7  

>AY358810-1|AAQ89170.1|  232|Homo sapiens macrophage antigen h
           protein.
          Length = 232

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287
           N +N++M EE      SSL  R  Q    A KL ++ I+  S  H CN C ++W
Sbjct: 98  NSNNLSMEEEFLKSQISSLLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147


>AK128243-1|BAC87350.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46377 fis, clone TESTI4052598. ).
          Length = 232

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287
           N +N++M EE      SSL  R  Q    A KL ++ I+  S  H CN C ++W
Sbjct: 98  NSNNLSMEEEFLKSQISSLLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147


>DQ368812-1|ABC96323.1|  276|Homo sapiens C-type lectin domain
           family 12 member B protein.
          Length = 276

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 126 NEDNINMSEESTSEPNSSLPYRSYQTQKSAHKLFKKKILQNSFGHACNVCDRLW 287
           N +N++M EE      SS+  R  Q    A KL ++ I+  S  H CN C ++W
Sbjct: 98  NSNNLSMEEEFLKSQISSVLKRQEQM---AIKLCQELIIHTS-DHRCNPCPKMW 147


>AK023181-1|BAB14450.1|  857|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
           ELONGATION FACTOR 2. ).
          Length = 857

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +3

Query: 123 ENEDNINMSEESTSEPNSSLPYRSYQTQKSAHKL--FKKKILQNSFGHAC-NVCDRLWFL 293
           EN D I   E+ TS  N          QK+  K+  FK K+ Q+  G    N+ D++W  
Sbjct: 505 ENSDLIRSMEQLTSSLNEGENTHMIH-QKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSF 563

Query: 294 EDLKCG 311
              KCG
Sbjct: 564 GPRKCG 569


>BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain
           containing 4A protein.
          Length = 1863

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293
           N     +S PNS LP   R+ Q  KSAHK+ K+          C +  C  LWF+
Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774


>BC028057-1|AAH28057.1|  933|Homo sapiens DENND4A protein protein.
          Length = 933

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293
           N     +S PNS LP   R+ Q  KSAHK+ K+          C +  C  LWF+
Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774


>AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein
           protein.
          Length = 1831

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293
           N     +S PNS LP   R+ Q  KSAHK+ K+          C +  C  LWF+
Sbjct: 688 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 742


>AK091368-1|BAC03648.1|  928|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34049 fis, clone FCBBF3000110, weakly similar to
           CRAG protein. ).
          Length = 928

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293
           N     +S PNS LP   R+ Q  KSAHK+ K+          C +  C  LWF+
Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774


>AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding
           protein IRLB protein.
          Length = 1865

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 141 NMSEESTSEPNSSLPY--RSYQTQKSAHKLFKKKILQNSFGHACNV--CDRLWFL 293
           N     +S PNS LP   R+ Q  KSAHK+ K+          C +  C  LWF+
Sbjct: 720 NKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFI 774


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,474,693
Number of Sequences: 237096
Number of extensions: 1566687
Number of successful extensions: 6661
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6661
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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