SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1053
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058662-1|AAL13891.1|  455|Drosophila melanogaster LD36945p pro...   116   3e-26
AE014134-2304|AAF53264.1|  455|Drosophila melanogaster CG16812-P...   116   3e-26
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    30   1.8  
AY060275-1|AAL25314.1|  306|Drosophila melanogaster GH10971p pro...    29   3.1  
AE014298-81|AAN09023.1|  306|Drosophila melanogaster CG7486-PC, ...    29   3.1  
BT021366-1|AAX33514.1|  522|Drosophila melanogaster LP10213p pro...    29   5.4  
BT010022-1|AAQ22491.1|  626|Drosophila melanogaster RE09982p pro...    29   5.4  
AF151390-1|AAF02535.1|  486|Drosophila melanogaster Sex-lethal i...    29   5.4  
AE014298-2079|AAF48406.1|  626|Drosophila melanogaster CG9503-PA...    29   5.4  
AE014296-3461|AAF51670.1|  486|Drosophila melanogaster CG10582-P...    29   5.4  
BT023406-1|AAY55822.1|  376|Drosophila melanogaster IP10422p pro...    28   9.4  
BT023347-1|AAY55763.1|  265|Drosophila melanogaster IP10522p pro...    28   9.4  
BT023295-1|AAY55711.1|  265|Drosophila melanogaster IP10622p pro...    28   9.4  
BT023223-1|AAY55639.1|  265|Drosophila melanogaster IP10722p pro...    28   9.4  
BT010243-1|AAQ23561.1|  672|Drosophila melanogaster RE42927p pro...    28   9.4  
AE014134-2381|AAN10840.1|  672|Drosophila melanogaster CG31814-P...    28   9.4  
AE014134-1122|AAF52409.1|  315|Drosophila melanogaster CG11320-P...    28   9.4  

>AY058662-1|AAL13891.1|  455|Drosophila melanogaster LD36945p
           protein.
          Length = 455

 Score =  116 bits (278), Expect = 3e-26
 Identities = 65/120 (54%), Positives = 77/120 (64%), Gaps = 9/120 (7%)
 Frame = +2

Query: 50  MDSNLTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGITRMGDVI 229
           M  +    WV FF  AGIPS  AA YA  F ENRIQ DMLLDLNKEYLR+MGIT MGD+I
Sbjct: 1   MSKSSAARWVKFFNAAGIPSPAAAGYAHVFVENRIQDDMLLDLNKEYLREMGITLMGDII 60

Query: 230 AILRHSKQVHENAARDKVLSNTSVNKV--PVA------AITGRSTLPQPSSPASRIL-EH 382
           AILRHSK V E  AR++VL+   V  V  PV+        T ++ +  P+ PA R+L EH
Sbjct: 61  AILRHSKTVCEQNAREQVLTTEVVQSVVRPVSPKPKAPVATPKAKVYPPAKPARRVLPEH 120


>AE014134-2304|AAF53264.1|  455|Drosophila melanogaster CG16812-PA
           protein.
          Length = 455

 Score =  116 bits (278), Expect = 3e-26
 Identities = 65/120 (54%), Positives = 77/120 (64%), Gaps = 9/120 (7%)
 Frame = +2

Query: 50  MDSNLTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGITRMGDVI 229
           M  +    WV FF  AGIPS  AA YA  F ENRIQ DMLLDLNKEYLR+MGIT MGD+I
Sbjct: 1   MSKSSAARWVKFFNAAGIPSPAAAGYAHVFVENRIQDDMLLDLNKEYLREMGITLMGDII 60

Query: 230 AILRHSKQVHENAARDKVLSNTSVNKV--PVA------AITGRSTLPQPSSPASRIL-EH 382
           AILRHSK V E  AR++VL+   V  V  PV+        T ++ +  P+ PA R+L EH
Sbjct: 61  AILRHSKTVCEQNAREQVLTTEVVQSVVRPVSPKPKAPVATPKAKVYPPAKPARRVLPEH 120


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +2

Query: 167 LLDLNKEYLRDMGITR-MGDVIAILRHSKQVHENAARDKVLSNTSVNKVPVAAITGRSTL 343
           +L L+ E+L   G+    GD  A+ RH      +        N S +  P+AA+ G    
Sbjct: 208 VLGLSAEHLTQNGLVEGHGDPYALARHYSPQQPSHHHHSTSRNASPSPNPIAAVGGGGEF 267

Query: 344 -PQPSSPASRILEHYTR 391
            P+ S+P+S    + +R
Sbjct: 268 YPRNSTPSSNHNRYLSR 284


>AY060275-1|AAL25314.1|  306|Drosophila melanogaster GH10971p
           protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +2

Query: 32  NVKNNKMDSNLTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGIT 211
           ++K+N + +    +  +  + A  P D A T A+   +  I+SD         +  + +T
Sbjct: 219 HLKSNGLQAQANLLKDTIISNAPEP-DAAGTAAMA-VKQEIESDNQQSYCSTQIDALKLT 276

Query: 212 RMGDVIAILRHSKQVHENAARDKVLSN 292
           R    IA++ + ++ H N +RD ++S+
Sbjct: 277 RENAGIALIINQQKFHRNVSRDNMVSS 303


>AE014298-81|AAN09023.1|  306|Drosophila melanogaster CG7486-PC,
           isoform C protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +2

Query: 32  NVKNNKMDSNLTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGIT 211
           ++K+N + +    +  +  + A  P D A T A+   +  I+SD         +  + +T
Sbjct: 219 HLKSNGLQAQANLLKDTIISNAPEP-DAAGTAAMA-VKQEIESDNQQSYCSTQIDALKLT 276

Query: 212 RMGDVIAILRHSKQVHENAARDKVLSN 292
           R    IA++ + ++ H N +RD ++S+
Sbjct: 277 RENAGIALIINQQKFHRNVSRDNMVSS 303


>BT021366-1|AAX33514.1|  522|Drosophila melanogaster LP10213p
           protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 89  TTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGITRMGDVIAILRHSKQVHENA 268
           T A   +  AA     + +  ++S  LL+     LRD  +    DVI+IL  ++ V  + 
Sbjct: 296 TVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARMLSFSDVISIL--AEHVDPHV 353

Query: 269 ARDKVLS 289
           A DKVL+
Sbjct: 354 AADKVLA 360


>BT010022-1|AAQ22491.1|  626|Drosophila melanogaster RE09982p
           protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
 Frame = +2

Query: 11  VDIYYKMNVKNNKMDSN-LTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKE 187
           V+   +M  +N  ++   +TG  ++  TT        +T        R++ ++ + +N  
Sbjct: 220 VEAGVEMGYENRDLNGEKMTGFMIAQGTTRR--GSRCSTSKAFLRPARLRPNLHISMNSH 277

Query: 188 YLRDM--GITRMGDVIAILRHSKQVHENAARDKVLSNTSVNKVPVAAITG 331
             R M   +T++   +  ++  K  H  A ++ VLS  SVN   +  ++G
Sbjct: 278 VTRIMIDPVTKLAFGVEFVKDQKLYHVRATKEVVLSGGSVNSPQLLMLSG 327


>AF151390-1|AAF02535.1|  486|Drosophila melanogaster Sex-lethal
           interactor protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 89  TTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGITRMGDVIAILRHSKQVHENA 268
           T A   +  AA     + +  ++S  LL+     LRD  +    DVI+IL  ++ V  + 
Sbjct: 260 TVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARMLSFSDVISIL--AEHVDPHV 317

Query: 269 ARDKVLS 289
           A DKVL+
Sbjct: 318 AADKVLA 324


>AE014298-2079|AAF48406.1|  626|Drosophila melanogaster CG9503-PA
           protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
 Frame = +2

Query: 11  VDIYYKMNVKNNKMDSN-LTGMWVSFFTTAGIPSDVAATYALTFTENRIQSDMLLDLNKE 187
           V+   +M  +N  ++   +TG  ++  TT        +T        R++ ++ + +N  
Sbjct: 220 VEAGVEMGYENRDLNGEKMTGFMIAQGTTRR--GSRCSTSKAFLRPARLRPNLHISMNSH 277

Query: 188 YLRDM--GITRMGDVIAILRHSKQVHENAARDKVLSNTSVNKVPVAAITG 331
             R M   +T++   +  ++  K  H  A ++ VLS  SVN   +  ++G
Sbjct: 278 VTRIMIDPVTKLAFGVEFVKDQKLYHVRATKEVVLSGGSVNSPQLLMLSG 327


>AE014296-3461|AAF51670.1|  486|Drosophila melanogaster CG10582-PA
           protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 89  TTAGIPSDVAATYALTFTENRIQSDMLLDLNKEYLRDMGITRMGDVIAILRHSKQVHENA 268
           T A   +  AA     + +  ++S  LL+     LRD  +    DVI+IL  ++ V  + 
Sbjct: 260 TVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARMLSFSDVISIL--AEHVDPHV 317

Query: 269 ARDKVLS 289
           A DKVL+
Sbjct: 318 AADKVLA 324


>BT023406-1|AAY55822.1|  376|Drosophila melanogaster IP10422p
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 168 SISLWILFSVNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           +++LW +   ++ AY+   S+G+P  V K   + V F
Sbjct: 193 NLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNF 229


>BT023347-1|AAY55763.1|  265|Drosophila melanogaster IP10522p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 168 SISLWILFSVNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           +++LW +   ++ AY+   S+G+P  V K   + V F
Sbjct: 82  NLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNF 118


>BT023295-1|AAY55711.1|  265|Drosophila melanogaster IP10622p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 168 SISLWILFSVNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           +++LW +   ++ AY+   S+G+P  V K   + V F
Sbjct: 82  NLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNF 118


>BT023223-1|AAY55639.1|  265|Drosophila melanogaster IP10722p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 168 SISLWILFSVNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           +++LW +   ++ AY+   S+G+P  V K   + V F
Sbjct: 82  NLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNF 118


>BT010243-1|AAQ23561.1|  672|Drosophila melanogaster RE42927p
           protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -3

Query: 141 VNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           ++++AY+   S+G+P  + K  H+ V+F
Sbjct: 242 LHMAAYLCVASNGVPPSISKRVHLRVQF 269


>AE014134-2381|AAN10840.1|  672|Drosophila melanogaster CG31814-PA
           protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -3

Query: 141 VNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           ++++AY+   S+G+P  + K  H+ V+F
Sbjct: 242 LHMAAYLCVASNGVPPSISKRVHLRVQF 269


>AE014134-1122|AAF52409.1|  315|Drosophila melanogaster CG11320-PA
           protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 168 SISLWILFSVNVSAYVAATSDGIPAVVKKLTHIPVRF 58
           +++LW +   ++ AY+   S+G+P  V K   + V F
Sbjct: 184 NLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNF 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,305,857
Number of Sequences: 53049
Number of extensions: 473078
Number of successful extensions: 1462
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -