BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1053 (539 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 4.6 AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.1 AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.1 AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.1 AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.1 AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.1 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 21.8 bits (44), Expect = 4.6 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = -2 Query: 103 YTSCCEETYP 74 Y SCC E YP Sbjct: 192 YYSCCPEPYP 201 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 21.0 bits (42), Expect = 8.1 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = -2 Query: 103 YTSCCEETYP 74 Y CC+E YP Sbjct: 214 YYPCCDEPYP 223 >AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 21.0 bits (42), Expect = 8.1 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = +2 Query: 275 DKVLSNTSVNKVPVAAITGR 334 D++ +++V +PV+ I+GR Sbjct: 47 DEMKKDSAVKGIPVSCISGR 66 >AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 21.0 bits (42), Expect = 8.1 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = +2 Query: 275 DKVLSNTSVNKVPVAAITGR 334 D++ +++V +PV+ I+GR Sbjct: 47 DEMKKDSAVKGIPVSCISGR 66 >AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 21.0 bits (42), Expect = 8.1 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = +2 Query: 275 DKVLSNTSVNKVPVAAITGR 334 D++ +++V +PV+ I+GR Sbjct: 47 DEMKKDSAVKGIPVSCISGR 66 >AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase alpha 1 subunit protein. Length = 699 Score = 21.0 bits (42), Expect = 8.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +1 Query: 100 YTIRCGCYICTYIYREQ 150 Y + CG + TYI+ +Q Sbjct: 542 YCVACGLHRDTYIHAQQ 558 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 142,843 Number of Sequences: 438 Number of extensions: 2935 Number of successful extensions: 9 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15336375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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