BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1052 (669 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 6.1 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 6.1 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.0 >Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP57-2 protein. Length = 464 Score = 21.8 bits (44), Expect = 6.1 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -2 Query: 329 TMQSLDTLSYAMLLLRIFHNTYIAS 255 T++ +D Y M L + HN Y S Sbjct: 244 TLKEVDNKVYGMALSPVTHNLYYNS 268 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 21.8 bits (44), Expect = 6.1 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 151 VLKSNYWLLADWCSY 195 ++KSN WL W Y Sbjct: 72 IMKSNVWLRFIWTDY 86 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.4 bits (43), Expect = 8.0 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +2 Query: 515 HLYISRCEKLFGLSDISLNTRHFF 586 H Y + ++ + DI LNT +FF Sbjct: 212 HDYNLENKLIYFIEDIGLNTYYFF 235 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 166,285 Number of Sequences: 438 Number of extensions: 3452 Number of successful extensions: 12 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20221290 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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