Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1051
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 482 DCPSQWPWIL 511
           +CP+ +PWIL
Sbjct: 508 ECPNNYPWIL 517


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 482 DCPSQWPWIL 511
           +CP+ +PWIL
Sbjct: 515 ECPNNYPWIL 524


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 524 FPICPESTAIAMGNRIYSSKKRACNSSNNEIG 429
           F IC +  A+ + N ++  +KR  N  ++ IG
Sbjct: 78  FAICCDFIALIVVNIVHVFRKRRVNYKDSNIG 109


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 338 YIISLLEVLRNSERHAGRSYGP 273
           Y ++LL ++ N   HA R  GP
Sbjct: 321 YCMTLLYIICNEGHHATRKMGP 342


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 338 YIISLLEVLRNSERHAGRSYGP 273
           Y ++LL ++ N   HA R  GP
Sbjct: 321 YCMTLLYIICNEGHHATRKMGP 342


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 221 YNHRSLYKLHLQRR 180
           YNHR   +LHL ++
Sbjct: 532 YNHRPWQQLHLNKK 545


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,544
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)