Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1051
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   3.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   3.8  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   6.6  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 648 IKRQYGPS*ISFHCKHAVLIEFNVL*DVAIFFIIVRR 538
           ++R+ G   +  HC+  + IE       A FF+ + R
Sbjct: 390 MRRRSGSPTLHIHCRRGLTIETGARCSTAAFFLFLAR 426


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 506 STAIAMGNRIYSSKKRACNSSNNEIGY 426
           +T I M  R Y+S+ R C     +IGY
Sbjct: 41  NTDINMFQRKYTSEIRRCEEMERKIGY 67


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 341 DYIISLLEVLRNSERHAGRSYGPNDG 264
           +YI  L + LRN  +   RSYG   G
Sbjct: 79  NYIEQLSDSLRNQSQAGNRSYGGAGG 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,487
Number of Sequences: 2352
Number of extensions: 14110
Number of successful extensions: 65
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)