BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1050 (704 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI0000D57398 Cluster: PREDICTED: similar to Protein ti... 48 2e-04 UniRef50_P48613 Cluster: Protein tipE; n=5; Diptera|Rep: Protein... 46 7e-04 UniRef50_Q483E0 Cluster: Putative polysaccharide biosynthesis pr... 35 1.7 UniRef50_A6F692 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0 >UniRef50_UPI0000D57398 Cluster: PREDICTED: similar to Protein tipE (Temperature-induced paralytic E); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Protein tipE (Temperature-induced paralytic E) - Tribolium castaneum Length = 405 Score = 48.0 bits (109), Expect = 2e-04 Identities = 24/54 (44%), Positives = 30/54 (55%) Frame = +3 Query: 468 TMADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 TM + +I T+ +KLLFYTT PFVI+PAFTTIFM+F Sbjct: 69 TMEEAPEIKQTWQQKLLFYTTAFFVLLGTFSLFSFLFLVPFVIDPAFTTIFMEF 122 >UniRef50_P48613 Cluster: Protein tipE; n=5; Diptera|Rep: Protein tipE - Drosophila melanogaster (Fruit fly) Length = 452 Score = 46.4 bits (105), Expect = 7e-04 Identities = 27/53 (50%), Positives = 28/53 (52%) Frame = +3 Query: 471 MADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 M DE+ T EKLLFYTT PFVIEPAFTTIFMQF Sbjct: 1 MGDEQD-KRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQF 52 >UniRef50_Q483E0 Cluster: Putative polysaccharide biosynthesis protein; n=1; Colwellia psychrerythraea 34H|Rep: Putative polysaccharide biosynthesis protein - Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibriopsychroerythus) Length = 415 Score = 35.1 bits (77), Expect = 1.7 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 Query: 482 FVGHCGKAALVEFIALVSARLFHCILFIFSLHKTFLLNVRVLFK 351 FVG K A V L+ ++LFHC+ IFS+H + ++L K Sbjct: 313 FVGENFKNASVYVELLILSQLFHCLYMIFSVHLGYSKKTKILSK 356 >UniRef50_A6F692 Cluster: Putative uncharacterized protein; n=1; Moritella sp. PE36|Rep: Putative uncharacterized protein - Moritella sp. PE36 Length = 348 Score = 32.7 bits (71), Expect = 9.0 Identities = 21/84 (25%), Positives = 38/84 (45%) Frame = -1 Query: 488 FLFVGHCGKAALVEFIALVSARLFHCILFIFSLHKTFLLNVRVLFKCPLWHSITFLIVCL 309 FLF G ++ F+ L +R+F LF + ++ L + +F P + I ++ Sbjct: 245 FLFYGIPSTLLIISFLILDDSRIFRSKLFCLLGNSSYSLYLSHVFTLPFFIKIIVILDFD 304 Query: 308 RKKLRSLLGYLFTQ*YLVLENLYI 237 L S+L +F + V+ YI Sbjct: 305 EFYLTSILSVIFCYVFAVISYKYI 328 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 611,287,126 Number of Sequences: 1657284 Number of extensions: 11092574 Number of successful extensions: 21052 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 20584 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21045 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56198352344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -