Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1050
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      27   0.76 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.8  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    25   2.3  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   4.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   9.4  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 383 TFLLNVRVLFKCPLWHSITFLIVCLRKKLR 294
           T L  V V F C  WHS+     C R K R
Sbjct: 177 TLLCVVVVPFCCRYWHSLRLSYACYRAKHR 206


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 421 SRAETSAMNSTSAALPQWPTKRKSLRPFLRNSYSTQQP 534
           SR + +   STSA +P  P     +RP++      + P
Sbjct: 872 SRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAP 909


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 594 IEPAFTTIFMQFRSYRSFVCYH 659
           +EP+ T +    R++RSF+CYH
Sbjct: 125 LEPSVTDVCE--RAHRSFLCYH 144


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 306 KETSIVTRLLVYTMILGT*KSLYLKVN 226
           ++TSI  + +  + ILG  + L+LKVN
Sbjct: 470 EKTSIPMKFITNSFILGPREGLWLKVN 496


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 463 LPQWPTKRKSLRPFLRNSYSTQQPPSFFLP 552
           L Q+   R +  PF+ +++ T  PP++  P
Sbjct: 360 LEQFAVLRYTTGPFINDAFPTGAPPTYEEP 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,471
Number of Sequences: 2352
Number of extensions: 11916
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)