BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1050 (704 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U27561-1|AAC48307.1| 452|Drosophila melanogaster tipE protein. 46 4e-05 AY060317-1|AAL25356.1| 452|Drosophila melanogaster GH18645p pro... 46 4e-05 AE014296-788|AAN11591.1| 452|Drosophila melanogaster CG1232-PB,... 46 4e-05 AE014296-787|AAF47857.1| 452|Drosophila melanogaster CG1232-PA,... 46 4e-05 DQ139958-1|ABA06529.1| 309|Drosophila melanogaster TipE-like pr... 30 3.5 AE014296-784|AAF47854.1| 309|Drosophila melanogaster CG15004-PA... 30 3.5 >U27561-1|AAC48307.1| 452|Drosophila melanogaster tipE protein. Length = 452 Score = 46.4 bits (105), Expect = 4e-05 Identities = 27/53 (50%), Positives = 28/53 (52%) Frame = +3 Query: 471 MADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 M DE+ T EKLLFYTT PFVIEPAFTTIFMQF Sbjct: 1 MGDEQD-KRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQF 52 >AY060317-1|AAL25356.1| 452|Drosophila melanogaster GH18645p protein. Length = 452 Score = 46.4 bits (105), Expect = 4e-05 Identities = 27/53 (50%), Positives = 28/53 (52%) Frame = +3 Query: 471 MADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 M DE+ T EKLLFYTT PFVIEPAFTTIFMQF Sbjct: 1 MGDEQD-KRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQF 52 >AE014296-788|AAN11591.1| 452|Drosophila melanogaster CG1232-PB, isoform B protein. Length = 452 Score = 46.4 bits (105), Expect = 4e-05 Identities = 27/53 (50%), Positives = 28/53 (52%) Frame = +3 Query: 471 MADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 M DE+ T EKLLFYTT PFVIEPAFTTIFMQF Sbjct: 1 MGDEQD-KRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQF 52 >AE014296-787|AAF47857.1| 452|Drosophila melanogaster CG1232-PA, isoform A protein. Length = 452 Score = 46.4 bits (105), Expect = 4e-05 Identities = 27/53 (50%), Positives = 28/53 (52%) Frame = +3 Query: 471 MADEEKIPPTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 M DE+ T EKLLFYTT PFVIEPAFTTIFMQF Sbjct: 1 MGDEQD-KRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQF 52 >DQ139958-1|ABA06529.1| 309|Drosophila melanogaster TipE-like protein 2 protein. Length = 309 Score = 29.9 bits (64), Expect = 3.5 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 465 ATMADEEKIP-PTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 A A E+I T LEK FYT+ PFV++PA +TI + Sbjct: 67 AIKAKREEIEMDTLLEKAKFYTSVCLGTTAILSVFTFLFLIPFVVDPAISTIIADY 122 >AE014296-784|AAF47854.1| 309|Drosophila melanogaster CG15004-PA protein. Length = 309 Score = 29.9 bits (64), Expect = 3.5 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 465 ATMADEEKIP-PTFLEKLLFYTTXXXXXXXXXXXXXXXXXXPFVIEPAFTTIFMQF 629 A A E+I T LEK FYT+ PFV++PA +TI + Sbjct: 67 AIKAKREEIEMDTLLEKAKFYTSVCLGTTAILSVFTFLFLIPFVVDPAISTIIADY 122 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,794,901 Number of Sequences: 53049 Number of extensions: 519062 Number of successful extensions: 920 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3108380451 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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