Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1049
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    25   3.0  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    25   3.0  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    24   3.9  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    24   3.9  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    24   3.9  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    24   3.9  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   3.9  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    24   3.9  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    24   5.2  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   6.8  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    23   6.8  
EF426157-1|ABO26400.1|   97|Anopheles gambiae unknown protein.         23   9.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.0  

>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA++  G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIQHVGSVHAAP 53


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIASSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSTIQHHAAPAIHHVGSVHAAP 53


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA++  G +HAAP
Sbjct: 26  GSIATSHSTIQHHARPAIQHVGSIHAAP 53


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSSIQHHAAPAIHHVGSIHAAP 53


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 40  APALWPAAPRVS 75
           AP+LWP A R+S
Sbjct: 102 APSLWPPAERIS 113


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 GCCAQQHDVPPRARGPAVRQQGQLHAAP 295
           G  A  H        PA+   G +HAAP
Sbjct: 26  GSIATSHSSIQHHAAPAIHHVGSVHAAP 53


>EF426157-1|ABO26400.1|   97|Anopheles gambiae unknown protein.
          Length = 97

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +3

Query: 492 IHKQSFFSGEKLTKKNNFLIFSTKIIVFFSYGNIRLSTTRSSQALRDPF*ISI 650
           + KQS F+  K   K  F I   + +++           R   ALRDP+ + +
Sbjct: 1   LRKQSQFNARK---KFQFAILCVRAMIWIKRLRYTPEPLRVEDALRDPYRVKV 50


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 377  AHLHVHGIPSSGSEFAADPTAHQQ 448
            AH    G P S + +A DPT ++Q
Sbjct: 1776 AHPSCEGFPYSRTIYANDPTENKQ 1799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,303
Number of Sequences: 2352
Number of extensions: 13287
Number of successful extensions: 49
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)