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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1049
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29529-1|AAB49330.1|  186|Drosophila melanogaster guf protein.         86   4e-17
AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine de...    86   4e-17
AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-P...    86   4e-17
AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-P...    86   4e-17
AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-P...    86   4e-17
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ...    29   4.5  
X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral n...    29   6.0  
AL031883-2|CAA21410.1|  723|Drosophila melanogaster EG:118B3.1,F...    29   6.0  
AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA, ...    29   6.0  
AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB, ...    29   6.0  
AY119515-1|AAM50169.1|  494|Drosophila melanogaster GH14048p pro...    29   7.9  
AE014297-2491|AAF55530.2|  494|Drosophila melanogaster CG7131-PA...    29   7.9  

>U29529-1|AAB49330.1|  186|Drosophila melanogaster guf protein.
          Length = 186

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = +3

Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
           V+ +IL+     PV+I  K+++TE+    W  +++  NN++Y+ +P  L  +GSK +F+ 
Sbjct: 63  VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 120

Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
           LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N NY F
Sbjct: 121 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 180

Query: 465 LH 470
           L+
Sbjct: 181 LY 182


>AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine
           decarboxylase antizyme protein.
          Length = 254

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = +3

Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
           V+ +IL+     PV+I  K+++TE+    W  +++  NN++Y+ +P  L  +GSK +F+ 
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188

Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
           LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N NY F
Sbjct: 189 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 248

Query: 465 LH 470
           L+
Sbjct: 249 LY 250


>AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-PB,
           isoform B protein.
          Length = 248

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = +3

Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
           V+ +IL+     PV+I  K+++TE+    W  +++  NN++Y+ +P  L  +GSK +F+ 
Sbjct: 125 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 182

Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
           LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N NY F
Sbjct: 183 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 242

Query: 465 LH 470
           L+
Sbjct: 243 LY 244


>AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-PC,
           isoform C protein.
          Length = 270

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = +3

Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
           V+ +IL+     PV+I  K+++TE+    W  +++  NN++Y+ +P  L  +GSK +F+ 
Sbjct: 147 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 204

Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
           LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N NY F
Sbjct: 205 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 264

Query: 465 LH 470
           L+
Sbjct: 265 LY 266


>AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-PA,
           isoform A protein.
          Length = 254

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = +3

Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
           V+ +IL+     PV+I  K+++TE+    W  +++  NN++Y+ +P  L  +GSK +F+ 
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188

Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
           LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N NY F
Sbjct: 189 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 248

Query: 465 LH 470
           L+
Sbjct: 249 LY 250


>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
           homolog protein.
          Length = 1487

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 416 RSQNLESHEHEGAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHA 243
           +S  L+    E    G   GTT    DD     E L +EI+++H+ + A   +  G++
Sbjct: 566 QSMMLDGDLEEEQLNGPTQGTTTSGMDDGEDDLEGLLAEIEDEHQKMQARRSEFNGYS 623


>X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral
           nervous system defective)protein.
          Length = 722

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = -1

Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
           SA  T +QNA    L A  L      QH A  AAGL    HA  H
Sbjct: 662 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 704


>AL031883-2|CAA21410.1|  723|Drosophila melanogaster
           EG:118B3.1,FBgn0003986;vnd protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = -1

Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
           SA  T +QNA    L A  L      QH A  AAGL    HA  H
Sbjct: 663 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 705


>AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA,
           isoform A protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = -1

Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
           SA  T +QNA    L A  L      QH A  AAGL    HA  H
Sbjct: 663 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 705


>AE014298-60|ABI30961.1|  577|Drosophila melanogaster CG6172-PB,
           isoform B protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 20/45 (44%)
 Frame = -1

Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
           SA  T +QNA    L A  L      QH A  AAGL    HA  H
Sbjct: 517 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 559


>AY119515-1|AAM50169.1|  494|Drosophila melanogaster GH14048p
           protein.
          Length = 494

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -3

Query: 333 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 208
           CN+Y ++A    + P     CP   T  P   G  + CC QQPP
Sbjct: 5   CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48


>AE014297-2491|AAF55530.2|  494|Drosophila melanogaster CG7131-PA,
           isoform A protein.
          Length = 494

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -3

Query: 333 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 208
           CN+Y ++A    + P     CP   T  P   G  + CC QQPP
Sbjct: 5   CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,402,963
Number of Sequences: 53049
Number of extensions: 576421
Number of successful extensions: 1817
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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