Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1049
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein. 86 4e-17
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 86 4e-17
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 86 4e-17
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 86 4e-17
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 86 4e-17
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 29 4.5
X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral n... 29 6.0
AL031883-2|CAA21410.1| 723|Drosophila melanogaster EG:118B3.1,F... 29 6.0
AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA, ... 29 6.0
AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB, ... 29 6.0
AY119515-1|AAM50169.1| 494|Drosophila melanogaster GH14048p pro... 29 7.9
AE014297-2491|AAF55530.2| 494|Drosophila melanogaster CG7131-PA... 29 7.9
>U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein.
Length = 186
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Frame = +3
Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 63 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 120
Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
LL+FAEE+L ++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY F
Sbjct: 121 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 180
Query: 465 LH 470
L+
Sbjct: 181 LY 182
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Frame = +3
Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
LL+FAEE+L ++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY F
Sbjct: 189 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 248
Query: 465 LH 470
L+
Sbjct: 249 LY 250
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Frame = +3
Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 125 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 182
Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
LL+FAEE+L ++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY F
Sbjct: 183 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 242
Query: 465 LH 470
L+
Sbjct: 243 LY 244
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Frame = +3
Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 147 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 204
Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
LL+FAEE+L ++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY F
Sbjct: 205 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 264
Query: 465 LH 470
L+
Sbjct: 265 LY 266
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Frame = +3
Query: 120 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 290
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 291 LLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIF 464
LL+FAEE+L ++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY F
Sbjct: 189 LLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYF 248
Query: 465 LH 470
L+
Sbjct: 249 LY 250
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 416 RSQNLESHEHEGAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHA 243
+S L+ E G GTT DD E L +EI+++H+ + A + G++
Sbjct: 566 QSMMLDGDLEEEQLNGPTQGTTTSGMDDGEDDLEGLLAEIEDEHQKMQARRSEFNGYS 623
>X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral
nervous system defective)protein.
Length = 722
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -1
Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
SA T +QNA L A L QH A AAGL HA H
Sbjct: 662 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 704
>AL031883-2|CAA21410.1| 723|Drosophila melanogaster
EG:118B3.1,FBgn0003986;vnd protein.
Length = 723
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -1
Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
SA T +QNA L A L QH A AAGL HA H
Sbjct: 663 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 705
>AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA,
isoform A protein.
Length = 723
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -1
Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
SA T +QNA L A L QH A AAGL HA H
Sbjct: 663 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 705
>AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB,
isoform B protein.
Length = 577
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -1
Query: 368 SAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVH 234
SA T +QNA L A L QH A AAGL HA H
Sbjct: 517 SATATAMQNAAAHHLVA--LNGAAAYQHAAAAAAGLHAHAHAHAH 559
>AY119515-1|AAM50169.1| 494|Drosophila melanogaster GH14048p
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 333 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 208
CN+Y ++A + P CP T P G + CC QQPP
Sbjct: 5 CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48
>AE014297-2491|AAF55530.2| 494|Drosophila melanogaster CG7131-PA,
isoform A protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 333 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 208
CN+Y ++A + P CP T P G + CC QQPP
Sbjct: 5 CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,402,963
Number of Sequences: 53049
Number of extensions: 576421
Number of successful extensions: 1817
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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