Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1049
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 3.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.8
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 22 4.8
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 22 4.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 6.3
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 8.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +3
Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473
I+C + S + + F +GF P+ ++ P FL Y
Sbjct: 317 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAVSGPGLAFLVY 363
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 394 MNMKVRSRVARSGRLFKTQMMQLL 323
++MK++ V +SGR+ TQ + L
Sbjct: 353 VSMKIKQNVPQSGRVNNTQRNEYL 376
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/60 (23%), Positives = 23/60 (38%)
Frame = -1
Query: 383 GAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVHHVVVHNSLPA 204
G Q S +Q A + + +Q+ + A GH + HH + NS P+
Sbjct: 761 GQQGNSWSQQQVQQAQQVQQQMQAAMAAVQQSQQRHQHAAQMIYGHQQSHHGLHINSSPS 820
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 64 PRVSMMAKRLRNSYNYNN 117
P++ L N+YNYNN
Sbjct: 79 PKIISNNNPLSNNYNYNN 96
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265
CNS + ++ G + C CCR
Sbjct: 73 CNSQVQPSVASTTGFSKECYCCR 95
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265
CNS + ++ G + C CCR
Sbjct: 73 CNSQVQPSVASTTGFSKECYCCR 95
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/47 (23%), Positives = 18/47 (38%)
Frame = +3
Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473
I+C + S + + F +GF P+ + P FL Y
Sbjct: 370 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAASGPGLAFLVY 416
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 534 KNNFLIFSTKIIVFFSYGNIRLSTTR 611
+N L+ KI++ YG+I S T+
Sbjct: 11 QNVVLVKKVKIVLLIFYGSIMFSMTQ 36
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 25 PCYGQAPALWPAAPRVSMMAKRLRNSYNYN 114
PC + P + MAK +YNY+
Sbjct: 235 PCIFDNATIVNNGPEAAKMAKAFTYTYNYS 264
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 293 EQHEAVLAAGLQDPGHAEVHHVVVHNSL 210
E+H+ VL ++ G+ + NSL
Sbjct: 190 EEHDTVLVVNIEKSGNESKKYATSSNSL 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,761
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 62
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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