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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1049
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   3.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   3.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   3.6  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   4.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   4.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   4.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   6.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   8.3  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = +3

Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473
           I+C + S     + +  F  +GF       P+    ++ P   FL Y
Sbjct: 317 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAVSGPGLAFLVY 363


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 394 MNMKVRSRVARSGRLFKTQMMQLL 323
           ++MK++  V +SGR+  TQ  + L
Sbjct: 353 VSMKIKQNVPQSGRVNNTQRNEYL 376


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/60 (23%), Positives = 23/60 (38%)
 Frame = -1

Query: 383 GAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVHHVVVHNSLPA 204
           G Q  S     +Q A       +   + +Q+  +    A     GH + HH +  NS P+
Sbjct: 761 GQQGNSWSQQQVQQAQQVQQQMQAAMAAVQQSQQRHQHAAQMIYGHQQSHHGLHINSSPS 820


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNSLSNNYNYNN 96


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  PRVSMMAKRLRNSYNYNN 117
           P++      L N+YNYNN
Sbjct: 79  PKIISNNNPLSNNYNYNN 96


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265
           CNS  + ++    G +  C CCR
Sbjct: 73  CNSQVQPSVASTTGFSKECYCCR 95


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265
           CNS  + ++    G +  C CCR
Sbjct: 73  CNSQVQPSVASTTGFSKECYCCR 95


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/47 (23%), Positives = 18/47 (38%)
 Frame = +3

Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473
           I+C + S     + +  F  +GF       P+     + P   FL Y
Sbjct: 370 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAASGPGLAFLVY 416


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 534 KNNFLIFSTKIIVFFSYGNIRLSTTR 611
           +N  L+   KI++   YG+I  S T+
Sbjct: 11  QNVVLVKKVKIVLLIFYGSIMFSMTQ 36


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 25  PCYGQAPALWPAAPRVSMMAKRLRNSYNYN 114
           PC      +    P  + MAK    +YNY+
Sbjct: 235 PCIFDNATIVNNGPEAAKMAKAFTYTYNYS 264


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 293 EQHEAVLAAGLQDPGHAEVHHVVVHNSL 210
           E+H+ VL   ++  G+    +    NSL
Sbjct: 190 EEHDTVLVVNIEKSGNESKKYATSSNSL 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,761
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 62
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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