BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1049 (686 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1 Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 3.6 EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.6 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.6 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.6 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.6 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.6 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.6 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.8 AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 22 4.8 AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 22 4.8 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.3 AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 6.3 DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 8.3 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.3 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 23.4 bits (48), Expect = 2.1 Identities = 11/47 (23%), Positives = 19/47 (40%) Frame = +3 Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473 I+C + S + + F +GF P+ ++ P FL Y Sbjct: 317 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAVSGPGLAFLVY 363 >Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP57-2 protein. Length = 464 Score = 22.6 bits (46), Expect = 3.6 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -2 Query: 394 MNMKVRSRVARSGRLFKTQMMQLL 323 ++MK++ V +SGR+ TQ + L Sbjct: 353 VSMKIKQNVPQSGRVNNTQRNEYL 376 >EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein protein. Length = 1010 Score = 22.6 bits (46), Expect = 3.6 Identities = 14/60 (23%), Positives = 23/60 (38%) Frame = -1 Query: 383 GAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVHHVVVHNSLPA 204 G Q S +Q A + + +Q+ + A GH + HH + NS P+ Sbjct: 761 GQQGNSWSQQQVQQAQQVQQQMQAAMAAVQQSQQRHQHAAQMIYGHQQSHHGLHINSSPS 820 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNSLSNNYNYNN 96 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 312 PKIISNNNSLSNNYNYNN 329 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.6 bits (46), Expect = 3.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 312 PKIISNNNSLSNNYNYNN 329 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 22.2 bits (45), Expect = 4.8 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 Query: 64 PRVSMMAKRLRNSYNYNN 117 P++ L N+YNYNN Sbjct: 79 PKIISNNNPLSNNYNYNN 96 >AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. Length = 145 Score = 22.2 bits (45), Expect = 4.8 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = -3 Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265 CNS + ++ G + C CCR Sbjct: 73 CNSQVQPSVASTTGFSKECYCCR 95 >AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta protein precursor protein. Length = 145 Score = 22.2 bits (45), Expect = 4.8 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = -3 Query: 333 CNSYSRDALQRNPGAA*SCPCCR 265 CNS + ++ G + C CCR Sbjct: 73 CNSQVQPSVASTTGFSKECYCCR 95 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 21.8 bits (44), Expect = 6.3 Identities = 11/47 (23%), Positives = 18/47 (38%) Frame = +3 Query: 333 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 473 I+C + S + + F +GF P+ + P FL Y Sbjct: 370 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAASGPGLAFLVY 416 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 21.8 bits (44), Expect = 6.3 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +3 Query: 534 KNNFLIFSTKIIVFFSYGNIRLSTTR 611 +N L+ KI++ YG+I S T+ Sbjct: 11 QNVVLVKKVKIVLLIFYGSIMFSMTQ 36 >DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. Length = 495 Score = 21.4 bits (43), Expect = 8.3 Identities = 9/30 (30%), Positives = 13/30 (43%) Frame = +1 Query: 25 PCYGQAPALWPAAPRVSMMAKRLRNSYNYN 114 PC + P + MAK +YNY+ Sbjct: 235 PCIFDNATIVNNGPEAAKMAKAFTYTYNYS 264 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 21.4 bits (43), Expect = 8.3 Identities = 8/28 (28%), Positives = 14/28 (50%) Frame = -1 Query: 293 EQHEAVLAAGLQDPGHAEVHHVVVHNSL 210 E+H+ VL ++ G+ + NSL Sbjct: 190 EEHDTVLVVNIEKSGNESKKYATSSNSL 217 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 174,761 Number of Sequences: 438 Number of extensions: 3507 Number of successful extensions: 62 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 62 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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