BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1043 (417 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A6Q7X3 Cluster: Sensor protein; n=1; Sulfurovum sp. NBC... 33 2.4 UniRef50_Q65M21 Cluster: YhcU; n=1; Bacillus licheniformis ATCC ... 31 7.2 >UniRef50_A6Q7X3 Cluster: Sensor protein; n=1; Sulfurovum sp. NBC37-1|Rep: Sensor protein - Sulfurovum sp. (strain NBC37-1) Length = 683 Score = 33.1 bits (72), Expect = 2.4 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = -2 Query: 260 GDSALAATTFLLRSQTPHREIYMENSCRKFSNLFFVACNRECQTKSSGFLLF 105 G++ALA L+ TP++ +Y++ K S +A RE +T+ G LF Sbjct: 590 GEAALALLKEGLKQNTPYQLVYLDKQMPKLSGSEVIARYREMETQKRGKRLF 641 >UniRef50_Q65M21 Cluster: YhcU; n=1; Bacillus licheniformis ATCC 14580|Rep: YhcU - Bacillus licheniformis (strain DSM 13 / ATCC 14580) Length = 119 Score = 31.5 bits (68), Expect = 7.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 89 IRAVLQITKNRWILFDIHGYTRRRRDLKTSGSYFPYRSHD 208 I A+L K +W+L D + + R L G YFP S D Sbjct: 68 IHALLTKAKRKWVLKDRDLFDKNSRKLNDCGLYFPLTSAD 107 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 413,519,808 Number of Sequences: 1657284 Number of extensions: 7978640 Number of successful extensions: 19585 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 19157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19583 length of database: 575,637,011 effective HSP length: 92 effective length of database: 423,166,883 effective search space used: 19465676618 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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