Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1043
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   8.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 16   TYVRNTVPKQEQKTKKKTVAF 78
            TY    +PK+E + +KK++ F
Sbjct: 1281 TYFSTNLPKRETEVRKKSLDF 1301


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 28  NTVPKQEQKTKKKTVAFYNKNTCCAPNNKKPLDFV*HSR 144
           N+ P    K++K+        T CA  N+KP D   H R
Sbjct: 110 NSEPLVSPKSEKEEKDMETTLTPCASPNRKPDDNQDHLR 148


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 117 FFVIWSTARIFVI 79
           FF++W+ A IFV+
Sbjct: 116 FFLLWTPAVIFVV 128


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLLAETEYVPQMG 282
           I ++  VI+F   +FG   +F  IFTV   L+   + V  +G
Sbjct: 142 IRLKNCVIYFN-RIFGWNILFGHIFTVCRTLIYIDDNVKGLG 182


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 125 ILFDIHGYTRRRRDLKTSGSYFPYR 199
           ILF I+ Y ++  +L TS   + YR
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLLYTYR 42


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 280 YPICGTYSVSANNT 321
           +P CG Y  S N+T
Sbjct: 633 FPQCGDYVPSGNST 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 274 ERYPICGTYSVSANNTTATVKISMKMKTPP 363
           ERY   G    +     A  KI +K  TPP
Sbjct: 37  ERYKPIGVQIANRFGEQANEKIPLKDITPP 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,120
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)