Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1043
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          22   7.8  
AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.      22   7.8  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 ECAVTMTSERAIPHLRDIFGLSQQYDGNCKNFDEN 350
           +C +++++E     ++ + G S Q DG C N  E+
Sbjct: 35  QCQISVSAET----MKSLHGGSMQPDGTCDNLWES 65


>AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.
          Length = 94

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 ECAVTMTSERAIPHLRDIFGLSQQYDGNCKNFDEN 350
           +C +++++E     ++ + G S Q DG C N  E+
Sbjct: 35  QCQISVSAET----MKSLHGGSMQPDGTCDNLWES 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,130
Number of Sequences: 2352
Number of extensions: 8566
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)