BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1043 (417 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M64347-1|AAA58470.1| 731|Homo sapiens fgflr protein. 29 8.2 M58051-1|AAA52450.1| 806|Homo sapiens fibroblast growth factor ... 29 8.2 BC020797-1|AAH20797.1| 188|Homo sapiens ADP-ribosylation-like f... 29 8.2 BC005143-1|AAH05143.1| 188|Homo sapiens ADP-ribosylation-like f... 29 8.2 AY768549-1|AAU89726.1| 806|Homo sapiens fibroblast growth facto... 29 8.2 AY102608-1|AAM28950.1| 188|Homo sapiens ADP-ribosylation-like f... 29 8.2 AK223566-1|BAD97286.1| 188|Homo sapiens ADP-ribosylation-like f... 29 8.2 AF487554-2|AAM22078.1| 769|Homo sapiens fibroblast growth facto... 29 8.2 AF487554-1|AAM22079.1| 771|Homo sapiens fibroblast growth facto... 29 8.2 AF245114-1|AAF63380.1| 694|Homo sapiens fibroblast growth facto... 29 8.2 AF125530-1|AAF17224.1| 188|Homo sapiens jmx protein protein. 29 8.2 AF115965-1|AAP97237.1| 188|Homo sapiens JM5 protein protein. 29 8.2 AF070523-1|AAC64360.1| 188|Homo sapiens JWA protein protein. 29 8.2 AB209441-1|BAD92678.1| 879|Homo sapiens fibroblast growth facto... 29 8.2 AB097051-1|BAC77404.1| 188|Homo sapiens putative MAPK activatin... 29 8.2 AB052638-1|BAD83603.1| 188|Homo sapiens addicsin protein. 29 8.2 AB014765-1|BAC66462.1| 188|Homo sapiens DERP11 (dermal papilla ... 29 8.2 >M64347-1|AAA58470.1| 731|Homo sapiens fgflr protein. Length = 731 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 25 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 57 >M58051-1|AAA52450.1| 806|Homo sapiens fibroblast growth factor receptor protein. Length = 806 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132 >BC020797-1|AAH20797.1| 188|Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >BC005143-1|AAH05143.1| 188|Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AY768549-1|AAU89726.1| 806|Homo sapiens fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) protein. Length = 806 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132 >AY102608-1|AAM28950.1| 188|Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AK223566-1|BAD97286.1| 188|Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5 variant protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AF487554-2|AAM22078.1| 769|Homo sapiens fibroblast growth factor receptor 3 protein. Length = 769 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 63 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 95 >AF487554-1|AAM22079.1| 771|Homo sapiens fibroblast growth factor receptor 3 protein. Length = 771 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 63 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 95 >AF245114-1|AAF63380.1| 694|Homo sapiens fibroblast growth factor receptor 3 protein. Length = 694 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132 >AF125530-1|AAF17224.1| 188|Homo sapiens jmx protein protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AF115965-1|AAP97237.1| 188|Homo sapiens JM5 protein protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AF070523-1|AAC64360.1| 188|Homo sapiens JWA protein protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AB209441-1|BAD92678.1| 879|Homo sapiens fibroblast growth factor receptor 3 isoform 1 precursor variant protein. Length = 879 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 200 SHDEVFVISTR-KW*RRVRCHHDVRTSDTPSAG 295 SH++ S R + +RV CH VR +D PS+G Sbjct: 187 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 219 >AB097051-1|BAC77404.1| 188|Homo sapiens putative MAPK activating protein protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AB052638-1|BAD83603.1| 188|Homo sapiens addicsin protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 >AB014765-1|BAC66462.1| 188|Homo sapiens DERP11 (dermal papilla derived protein 11) protein. Length = 188 Score = 28.7 bits (61), Expect = 8.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 407 ITVRAIVIFFLLSLFGGVFIFIEIFTVAVVLL 312 + V + +FL+S+FGGV +F+ T ++L+ Sbjct: 102 VMVVMLASYFLISMFGGVMVFVFGITFPLLLM 133 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 59,816,713 Number of Sequences: 237096 Number of extensions: 1099277 Number of successful extensions: 2173 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2098 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2173 length of database: 76,859,062 effective HSP length: 83 effective length of database: 57,180,094 effective search space used: 3144905170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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