BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1043 (417 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 30 1.4 AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 29 1.9 AY084162-1|AAL89900.1| 331|Drosophila melanogaster RE37150p pro... 27 7.6 AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P... 27 7.6 >BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein. Length = 1872 Score = 29.9 bits (64), Expect = 1.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 4 SSTCTYVRNTVPKQEQKTKKKTVAFYNKNTCCAPNNKKP 120 +S+ T N E K K+K V+ + K++CC KKP Sbjct: 1535 NSSATTATNVQVIDETKPKRKKVSDWLKSSCCRSCRKKP 1573 >AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA protein. Length = 1831 Score = 29.5 bits (63), Expect = 1.9 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 4 SSTCTYVRNTVPKQEQKTKKKTVAFYNKNTCCAPNNKKP 120 +S+ T N E K K+K ++ + K++CC KKP Sbjct: 1533 NSSATTATNVQVIDETKPKRKKISDWLKSSCCRSCRKKP 1571 >AY084162-1|AAL89900.1| 331|Drosophila melanogaster RE37150p protein. Length = 331 Score = 27.5 bits (58), Expect = 7.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 257 DSALAATTFLLRSQTPHREIYMENSCRKFS 168 DS LAATT + Q+ H + E SC S Sbjct: 170 DSTLAATTIIRHHQSNHEQQQPEKSCPALS 199 >AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA, isoform A protein. Length = 1392 Score = 27.5 bits (58), Expect = 7.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 257 DSALAATTFLLRSQTPHREIYMENSCRKFS 168 DS LAATT + Q+ H + E SC S Sbjct: 1231 DSTLAATTIIRHHQSNHEQQQPEKSCPALS 1260 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,326,839 Number of Sequences: 53049 Number of extensions: 396158 Number of successful extensions: 850 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 850 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1251032760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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