Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1042
(438 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000F30BC1 Cluster: Eomesodermin; n=22; Bos taurus|R... 108 6e-23
UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse tr... 101 7e-21
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 92 4e-18
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 92 5e-18
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 89 4e-17
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 87 1e-16
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 85 5e-16
UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n... 78 9e-14
UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse tr... 77 2e-13
UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma japonicu... 76 4e-13
UniRef50_UPI0000F32C97 Cluster: UPI0000F32C97 related cluster; n... 71 8e-12
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 71 8e-12
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 69 4e-11
UniRef50_UPI0000F33F15 Cluster: UPI0000F33F15 related cluster; n... 69 6e-11
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 66 3e-10
UniRef50_UPI0000F317A8 Cluster: UPI0000F317A8 related cluster; n... 61 9e-09
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 60 2e-08
UniRef50_UPI0000F32B3B Cluster: UPI0000F32B3B related cluster; n... 60 2e-08
UniRef50_UPI0000F34253 Cluster: UPI0000F34253 related cluster; n... 58 1e-07
UniRef50_UPI0000F33C12 Cluster: UPI0000F33C12 related cluster; n... 58 1e-07
UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to endonuclea... 56 3e-07
UniRef50_Q6UE74 Cluster: ORF2; n=24; Tetrahymena thermophila|Rep... 56 3e-07
UniRef50_UPI0000F30CF6 Cluster: UPI0000F30CF6 related cluster; n... 56 4e-07
UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to endonuclea... 55 6e-07
UniRef50_UPI0000E46FAA Cluster: PREDICTED: similar to Rte-1 elem... 55 6e-07
UniRef50_UPI0000F31F50 Cluster: UPI0000F31F50 related cluster; n... 55 8e-07
UniRef50_UPI0000F316BC Cluster: UPI0000F316BC related cluster; n... 55 8e-07
UniRef50_A0NG79 Cluster: ENSANGP00000027469; n=2; Anopheles gamb... 54 1e-06
UniRef50_O16589 Cluster: Putative uncharacterized protein F21E9.... 54 2e-06
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C... 53 3e-06
UniRef50_UPI0000F32266 Cluster: UPI0000F32266 related cluster; n... 52 5e-06
UniRef50_UPI0000F342D3 Cluster: UPI0000F342D3 related cluster; n... 52 7e-06
UniRef50_UPI0000E46857 Cluster: PREDICTED: similar to bcnt, part... 51 9e-06
UniRef50_UPI0000F305E2 Cluster: UPI0000F305E2 related cluster; n... 51 1e-05
UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse tr... 50 2e-05
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 48 9e-05
UniRef50_Q226T9 Cluster: Putative uncharacterized protein; n=1; ... 48 9e-05
UniRef50_Q03278 Cluster: Retrovirus-related Pol polyprotein from... 48 9e-05
UniRef50_Q226R4 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_UPI0000F31803 Cluster: UPI0000F31803 related cluster; n... 47 2e-04
UniRef50_UPI00006CD1CA Cluster: hypothetical protein TTHERM_0012... 46 3e-04
UniRef50_Q678G0 Cluster: RNA-dependent DNA polymerase; n=1; Lymp... 46 3e-04
UniRef50_O44323 Cluster: Reverse transcriptase; n=1; Forficula a... 46 4e-04
UniRef50_A7S2E3 Cluster: Predicted protein; n=9; Nematostella ve... 45 6e-04
UniRef50_P11369 Cluster: Retrovirus-related Pol polyprotein LINE... 45 6e-04
UniRef50_Q226S2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_A5B034 Cluster: Putative uncharacterized protein; n=5; ... 44 0.001
UniRef50_O44318 Cluster: Reverse transcriptase; n=1; Limulus pol... 44 0.001
UniRef50_Q339V4 Cluster: Retrotransposon protein, putative, uncl... 44 0.002
UniRef50_A5B9W0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin... 43 0.002
UniRef50_Q9LDL8 Cluster: Putative uncharacterized protein AT4g08... 43 0.002
UniRef50_A5AFJ4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.002
UniRef50_A5B9I8 Cluster: Putative uncharacterized protein; n=3; ... 43 0.003
UniRef50_A5AI05 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_A7SDI1 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.003
UniRef50_Q7YXU7 Cluster: ORF2; n=1; Girardia tigrina|Rep: ORF2 -... 42 0.004
UniRef50_O99970 Cluster: Orf546; n=2; Porphyra purpurea|Rep: Orf... 42 0.006
UniRef50_A5C9W0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 42 0.006
UniRef50_A1WV30 Cluster: RNA-directed DNA polymerase; n=1; Halor... 42 0.008
UniRef50_A5APK6 Cluster: Putative uncharacterized protein; n=2; ... 42 0.008
UniRef50_Q8LMT3 Cluster: Putative retroelement; n=2; Oryza sativ... 41 0.010
UniRef50_A5C3A7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.010
UniRef50_P16423 Cluster: Retrovirus-related Pol polyprotein from... 41 0.010
UniRef50_A5BH71 Cluster: Putative uncharacterized protein; n=15;... 41 0.013
UniRef50_A5AM90 Cluster: Putative uncharacterized protein; n=1; ... 41 0.013
UniRef50_A5BE08 Cluster: Putative uncharacterized protein; n=1; ... 40 0.018
UniRef50_Q64B18 Cluster: Retron type reverse transcriptase; n=17... 40 0.018
UniRef50_Q6QI57 Cluster: LRRGT00151; n=3; Rattus norvegicus|Rep:... 40 0.023
UniRef50_Q9AN84 Cluster: ID459; n=40; root|Rep: ID459 - Bradyrhi... 40 0.023
UniRef50_Q8RSV8 Cluster: Maturase; n=1; uncultured marine bacter... 40 0.023
UniRef50_Q10PS2 Cluster: Retrotransposon protein, putative, uncl... 40 0.023
UniRef50_A3BMY1 Cluster: Putative uncharacterized protein; n=2; ... 40 0.023
UniRef50_Q4F8Q3 Cluster: Reverse transcriptase; n=1; Aedes aegyp... 40 0.023
UniRef50_Q8YLU0 Cluster: All5206 protein; n=1; Nostoc sp. PCC 71... 40 0.031
UniRef50_Q1Q0X4 Cluster: Similar to Group II intron encoded reve... 40 0.031
UniRef50_Q0ERZ4 Cluster: RNA-directed DNA polymerase; n=1; Therm... 40 0.031
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 40 0.031
UniRef50_Q76IK7 Cluster: Pol-like protein; n=1; Ciona intestinal... 40 0.031
UniRef50_A6LY84 Cluster: RNA-directed DNA polymerase; n=1; Clost... 39 0.041
UniRef50_A5BYD5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.041
UniRef50_A5AGG3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.041
UniRef50_Q2QYX0 Cluster: Retrotransposon protein, putative, uncl... 39 0.054
UniRef50_Q49P04 Cluster: Reverse transcriptase-like protein; n=2... 39 0.054
UniRef50_Q94LN7 Cluster: Putative non-LTR retroelement reverse t... 38 0.071
UniRef50_Q7XNY0 Cluster: OSJNBb0015N08.11 protein; n=4; Oryza sa... 38 0.071
UniRef50_O44319 Cluster: Reverse transcriptase; n=1; Anurida mar... 38 0.071
UniRef50_Q10VN2 Cluster: RNA-directed DNA polymerase; n=3; Cyano... 38 0.094
UniRef50_A5BSZ6 Cluster: Putative uncharacterized protein; n=3; ... 38 0.094
UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: Re... 38 0.12
UniRef50_Q9YW31 Cluster: ORF MSV061 putative LINE reverse transc... 38 0.12
UniRef50_A5C481 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_Q76IL7 Cluster: Pol-like protein; n=3; Danio rerio|Rep:... 37 0.16
UniRef50_Q47526 Cluster: Reverse transcriptase; n=1; Escherichia... 37 0.16
UniRef50_Q08WW1 Cluster: Prophage LambdaSa1, reverse transcripta... 37 0.16
UniRef50_A4VK83 Cluster: Reverse transcriptase; n=1; Pseudomonas... 37 0.16
UniRef50_Q7X6R8 Cluster: OSJNBa0071G03.15 protein; n=1; Oryza sa... 37 0.16
UniRef50_A5C3Q7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.16
UniRef50_A5BSI3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.16
UniRef50_Q5K671 Cluster: Reverse transcriptase; n=2; Bombyx mori... 37 0.16
UniRef50_UPI0000E4A879 Cluster: PREDICTED: similar to ReO_6, par... 37 0.22
UniRef50_Q1NNY7 Cluster: RNA-directed DNA polymerase; n=5; Bacte... 37 0.22
UniRef50_A5B035 Cluster: Putative uncharacterized protein; n=2; ... 37 0.22
UniRef50_Q1HW07 Cluster: Reverse transcriptase; n=1; Penaeus mon... 37 0.22
UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encod... 36 0.29
UniRef50_Q2BHS9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_Q1VQM5 Cluster: Prophage LambdaSa1, reverse transcripta... 36 0.29
UniRef50_Q1Q2Q2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_A5BRV9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to endonuclea... 36 0.38
UniRef50_Q122P2 Cluster: RNA-directed DNA polymerase; n=5; Prote... 36 0.38
UniRef50_Q9XE45 Cluster: Putative non-LTR retrolelement reverse ... 36 0.38
UniRef50_Q6ATG8 Cluster: Putative uncharacterized protein OSJNBa... 36 0.38
UniRef50_Q76IN3 Cluster: Reverse transcriptase; n=142; Entamoeba... 36 0.38
UniRef50_UPI0000F1FA63 Cluster: PREDICTED: similar to ReO_6; n=1... 36 0.50
UniRef50_UPI0000E4955E Cluster: PREDICTED: similar to fibropelli... 36 0.50
UniRef50_A1BI39 Cluster: CRISPR-associated protein Cas1; n=4; Ch... 36 0.50
UniRef50_O64463 Cluster: Gene, , similar to reverse transcriptas... 36 0.50
UniRef50_A5BH34 Cluster: Putative uncharacterized protein; n=1; ... 36 0.50
UniRef50_Q2P9X6 Cluster: Reverse transcriptase; n=2; Enterobacte... 36 0.50
UniRef50_Q7UY81 Cluster: Reverse transcriptase/maturase; n=1; Pi... 35 0.66
UniRef50_Q7XF82 Cluster: Retrotransposon protein, putative, uncl... 35 0.66
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 35 0.66
UniRef50_A2U5G6 Cluster: RNA-directed DNA polymerase; n=2; Firmi... 35 0.87
UniRef50_Q2QSD3 Cluster: Retrotransposon protein, putative, uncl... 35 0.87
UniRef50_Q49P02 Cluster: Reverse transcriptase-like protein; n=1... 35 0.87
UniRef50_Q64E53 Cluster: Prophage LambdaSa1 transcriptase/matura... 35 0.87
UniRef50_Q1PUN9 Cluster: Strong similarity to group II intron-en... 34 1.2
UniRef50_Q0LFN0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A4NDD1 Cluster: Magnesium/nickel/cobalt transporter Cor... 34 1.2
UniRef50_A5C583 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A3B4Y9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A6SW44 Cluster: RNA-directed DNA polymerase; n=1; Janth... 34 1.5
UniRef50_Q0DE61 Cluster: Os06g0174800 protein; n=3; Oryza sativa... 34 1.5
UniRef50_A5BFR6 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_A5B7M7 Cluster: Putative uncharacterized protein; n=4; ... 34 1.5
UniRef50_A5B3J7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_A5AZZ8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_Q71EW7 Cluster: Reverse transcriptase/maturase-like pro... 33 2.0
UniRef50_Q2R4V1 Cluster: Retrotransposon protein, putative, uncl... 33 2.0
UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; ... 33 2.0
UniRef50_Q76IM9 Cluster: Reverse transcriptase; n=1; Ciona intes... 33 2.0
UniRef50_UPI00015B5DC1 Cluster: PREDICTED: similar to CG11502-PA... 33 2.7
UniRef50_UPI0000F1FBF1 Cluster: PREDICTED: similar to ReO_6; n=1... 33 2.7
UniRef50_Q9B830 Cluster: NADH dehydrogenase subunit 2; n=1; Cory... 33 2.7
UniRef50_Q0S063 Cluster: RNA-directed DNA polymerase; n=3; Actin... 33 2.7
UniRef50_A7LY43 Cluster: Putative uncharacterized protein; n=2; ... 33 2.7
UniRef50_A6DJK4 Cluster: Reverse transcriptase/maturase; n=20; L... 33 2.7
UniRef50_A5KM63 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_A4C8M3 Cluster: RNA-directed DNA polymerase; n=12; Pseu... 33 2.7
UniRef50_Q53NE2 Cluster: Retrotransposon protein, putative, uncl... 33 2.7
UniRef50_Q2R263 Cluster: Retrotransposon protein, putative, uncl... 33 2.7
UniRef50_A2X084 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_UPI0000F1D8AF Cluster: PREDICTED: hypothetical protein;... 33 3.5
UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n... 33 3.5
UniRef50_Q6TFE1 Cluster: Putative group II intron-encoded matura... 33 3.5
UniRef50_Q0LU25 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q53PY1 Cluster: Retrotransposon protein, putative, uncl... 33 3.5
UniRef50_Q2QNX8 Cluster: Retrotransposon protein, putative, uncl... 33 3.5
UniRef50_Q0IMS1 Cluster: Os12g0550500 protein; n=11; Oryza sativ... 33 3.5
UniRef50_A5ALU5 Cluster: Methionine aminopeptidase; n=5; Eukaryo... 33 3.5
UniRef50_Q76IN9 Cluster: Reverse transcriptase; n=1; Ciona intes... 33 3.5
UniRef50_Q4C1M3 Cluster: RNA-directed DNA polymerase (Reverse tr... 32 4.7
UniRef50_Q3D424 Cluster: Cell wall surface anchor family protein... 32 4.7
UniRef50_Q1FNF9 Cluster: RNA-directed DNA polymerase; n=1; Clost... 32 4.7
UniRef50_A5VH22 Cluster: RNA-directed DNA polymerase; n=1; Sphin... 32 4.7
UniRef50_A5KMV9 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q7XMG7 Cluster: OSJNBa0028I23.15 protein; n=1; Oryza sa... 32 4.7
UniRef50_A7NY46 Cluster: Chromosome chr6 scaffold_3, whole genom... 32 4.7
UniRef50_A5C075 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q229J7 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_UPI00015612B7 Cluster: PREDICTED: similar to hCG2024112... 32 6.2
UniRef50_UPI0000F21E36 Cluster: PREDICTED: similar to ReO_6; n=1... 32 6.2
UniRef50_Q64IU6 Cluster: Reverse transcriptase; n=3; Kryptolebia... 32 6.2
UniRef50_Q6MQ57 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q47277 Cluster: Orf protein; n=48; cellular organisms|R... 32 6.2
UniRef50_Q113E5 Cluster: RNA-directed DNA polymerase; n=2; Cyano... 32 6.2
UniRef50_A6L278 Cluster: Putative reverse transcriptase; n=1; Ba... 32 6.2
UniRef50_A1T776 Cluster: RNA-directed DNA polymerase; n=1; Mycob... 32 6.2
UniRef50_Q8S7E0 Cluster: Putative uncharacterized protein OSJNBa... 32 6.2
UniRef50_Q7XWB0 Cluster: OSJNBa0061A09.16 protein; n=3; Oryza sa... 32 6.2
UniRef50_Q6UUN8 Cluster: Putative polyprotein; n=1; Oryza sativa... 32 6.2
UniRef50_Q0IR74 Cluster: Os11g0670100 protein; n=1; Oryza sativa... 32 6.2
UniRef50_Q4QDA7 Cluster: Putative uncharacterized protein; n=2; ... 32 6.2
UniRef50_A5HE93 Cluster: Telomerase reverse transcriptase; n=2; ... 32 6.2
UniRef50_Q64IU0 Cluster: Reverse transcriptase; n=1; Kryptolebia... 31 8.1
UniRef50_A6CAH4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q94Z25 Cluster: Orf557; n=2; Pylaiella littoralis|Rep: ... 31 8.1
UniRef50_Q4QQD3 Cluster: Gag-pol polyprotein; n=3; Schistosoma|R... 31 8.1
UniRef50_Q25757 Cluster: CTRP; n=3; Plasmodium falciparum|Rep: C... 31 8.1
UniRef50_A7I562 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_UPI0000F30BC1 Cluster: Eomesodermin; n=22; Bos taurus|Rep:
Eomesodermin - Bos Taurus
Length = 324
Score = 108 bits (259), Expect = 6e-23
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
ILSP LFN+Y EYIMR L++ GI + GR I+NL+YADDTTL+A +++E++ LL ++
Sbjct: 43 ILSPCLFNLYAEYIMRNAGLDEAQAGIKIAGRNINNLKYADDTTLMAESKEELKSLLMKV 102
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL IN KTK+M D Q + + I E V +++LGS IT G EI
Sbjct: 103 KEENEKVGLKINIQKTKIMASDPITSWQIDGETI---ETVRDFIFLGSKITTDGDRSHEI 159
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
+RR + R ++ L I + R IT
Sbjct: 160 KRRLLLGRKAMTNLDSILKSRDIT 183
>UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 281
Score = 101 bits (242), Expect = 7e-21
Identities = 63/143 (44%), Positives = 90/143 (62%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP LFNIY+E IMR LE + G+ GG+KI NLRYAD+TTL+ S+R+E+ LL R++
Sbjct: 43 ILSPNLFNIYSEDIMRKALEGFKGGVKFGGKKIMNLRYADETTLVCSSREELMDLLNRIK 102
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIR 361
+ + L +N KTK+M VDR + + E +AG + V L ST EIR
Sbjct: 103 LASEEKDLLLNTKKTKIMAVDR-DYDDTEFT-VAGNMI---EVELEST--------TEIR 149
Query: 362 RRCAVTRSSVERLTKIWRDRRIT 430
RR A+ RS+V+ ++ IW+ R ++
Sbjct: 150 RRMAMARSTVQNMSHIWKSRGLS 172
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 92.3 bits (219), Expect = 4e-18
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
ILSP LFN+Y EYIMR L + GI + R I+NLRYADDTTL + +++ LL ++
Sbjct: 43 ILSPCLFNLYAEYIMRNAGLGEAQAGIKIARRNINNLRYADDTTLWQKMK-KLKSLLMKV 101
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ + GL +N KTK+M Q + + + E V +++LG+ +T G C EI
Sbjct: 102 KEESEKVGLKLNIQKTKIMASGPITSWQIDGETV---ETVADFIFLGAKVTAGGDCSHEI 158
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
+RR + R + L I + R IT
Sbjct: 159 KRRLLLGRKVMTHLNSILKSRDIT 182
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 91.9 bits (218), Expect = 5e-18
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP LF YTE MR + GI GG+ ISNLRYADDT L+ S++D IE L +
Sbjct: 113 ILSPYLFITYTESGMREA-DVAHYGIKFGGKNISNLRYADDTALIESSKDGIESLTHAVN 171
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDE 355
L +N KTK+++ + + +Q I G V V S+ YLGST + C ++
Sbjct: 172 DAGKKLNLHLNVKKTKLLVAGKTSDTDCNIQ-IDGETVKDVESFKYLGSTKNSDASCTND 230
Query: 356 IRRRCAVTRSSVERLTKIWRDRRIT 430
I+ R A+ + + L +W DR I+
Sbjct: 231 IKIRIAIAKKRMVDLHVLWNDRNIS 255
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 89.0 bits (211), Expect = 4e-17
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNI E +M + D G+ V G+ I+NLR+ADD L+A +++ ++ +
Sbjct: 642 LSPQLFNILLEAVMLYAIHDTKIGVRVQGQLINNLRFADDIVLIADNDRDLQTIVDLVHQ 701
Query: 185 TALDFGLAINRDKTKMMIVDRANINQPEVQHI-AGCE---VVNSYVYLGSTITNAGGCED 352
++ +FGL IN KT++ + + QP++ +I G E V+ + YLG TI+ G C +
Sbjct: 702 SSSNFGLKINITKTEVQAISK----QPQLLNINVGGEQLKQVDKFTYLGGTISQTGSCSE 757
Query: 353 EIRRRCAVTRSSVERLTKIWRDRRI 427
E++ R + + L KIW + I
Sbjct: 758 EVKHRIGKAIGAFQALKKIWASQDI 782
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 87.4 bits (207), Expect = 1e-16
Identities = 44/144 (30%), Positives = 76/144 (52%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
+SP LFNI E +M + +E+ G + G I+NLR+ADD L+A T +E++ L+ ++
Sbjct: 729 ISPQLFNILLELVMTMAMEEVQIGAKIQGTCINNLRFADDIVLIAETPEELQTLVDKVYK 788
Query: 185 TALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRR 364
+ D GL +N KT++ + ++ N + V +VYLG I G +I+
Sbjct: 789 ASCDLGLKVNIAKTEVQAISKSKCNLNIDIANDRLKQVEDFVYLGGKIAENGSSTSDIKN 848
Query: 365 RCAVTRSSVERLTKIWRDRRITKN 436
R ++ +RL IW + I+ +
Sbjct: 849 RIRKAGAAFQRLNNIWTSKSISSH 872
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 85.4 bits (202), Expect = 5e-16
Identities = 47/146 (32%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ EY+M+ + + + GI +G +I+N+RYADDTTL+ + +++ LE
Sbjct: 235 LLSPSLFNLFLEYVMKDI-QQLESGIQMGDMRINNIRYADDTTLMELIFENLQISTNELE 293
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIR 361
+G+ IN K K+M D +I+ + E V +V+LGST+ + E++++
Sbjct: 294 KACRRWGMKINATKCKVMTEDHQDIS----LNNTNIEKVEKFVFLGSTVPS---IEEDVK 346
Query: 362 RRCAVTRSSVERL-TKIWRDRRITKN 436
RR + + RL + IW ++ I+++
Sbjct: 347 RRTRLAAWAFGRLKSAIWSNQDISRS 372
>UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n=9;
Bos taurus|Rep: UPI0000F32779 UniRef100 entry - Bos
Taurus
Length = 263
Score = 77.8 bits (183), Expect = 9e-14
Identities = 43/111 (38%), Positives = 65/111 (58%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I+NLRY DDTTL+A T +E++ LL +++ + GL +N KTK+M I+ E+
Sbjct: 1 INNLRYGDDTTLIAETEEELKSLLMKVKEESEKVGLKLNIQKTKIMA--SGPISSWEIDG 58
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
E V+ +++LGS IT G C EI+RR + R + L I++ R IT
Sbjct: 59 -ETVETVSDFIFLGSKITEDGDCSHEIKRRLLLERKVMTNLDSIFKSRDIT 108
>UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=4; Deuterostomia|Rep: PREDICTED:
similar to reverse transcriptase-like -
Strongylocentrotus purpuratus
Length = 565
Score = 76.6 bits (180), Expect = 2e-13
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP LFNIY+E IMR LE ++ G+ GG+KI+NLRYADDTTL+ S+R+E+ LL R++
Sbjct: 43 ILSPNLFNIYSEDIMRNALEGFNGGVKFGGKKITNLRYADDTTLVCSSREELMDLLNRIK 102
Score = 40.7 bits (91), Expect = 0.013
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 317 GSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRITKN 436
GS IT G EIRRR A+ RS+V+ ++ IW+ R ++ N
Sbjct: 113 GSIITTKGESTTEIRRRMAMARSTVQNMSHIWKSRGLSLN 152
>UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma
japonicum|Rep: Polyprotein - Schistosoma japonicum (Blood
fluke)
Length = 1091
Score = 75.8 bits (178), Expect = 4e-13
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISV-GGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
LSP LFN + ++ + L D G+ + G K+++L YADD LL+ D+++ L L
Sbjct: 774 LSPFLFNFIIDILLELTLSSSDFPGVDLFPGDKLTDLEYADDIVLLSEDADKMQDFLTTL 833
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
G+ + K KM++ D N V E VN + YLGS I+ G DEI
Sbjct: 834 NMNVSMLGMRFSPSKCKMLLQDWLNSAPKLVIGRETIECVNRFTYLGSLISPNGLVSDEI 893
Query: 359 RRRCAVTRSSVERLTKIWRDRRI 427
R RS+ L +WR R I
Sbjct: 894 SARIHKARSAFANLRHLWRRRDI 916
>UniRef50_UPI0000F32C97 Cluster: UPI0000F32C97 related cluster; n=6;
Bos taurus|Rep: UPI0000F32C97 UniRef100 entry - Bos
Taurus
Length = 265
Score = 71.3 bits (167), Expect = 8e-12
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
IL P LFN Y EYIMR LE GI + R I+NL+YADDTTL+A + +E++ LL ++
Sbjct: 159 ILLPYLFNFYAEYIMRNTGLEGAPAGIKIAERHINNLKYADDTTLMAESEEELKSLLMKV 218
Query: 179 ETTALDFGLAINRDKTKMM 235
+ + GL +N K K+M
Sbjct: 219 KEDSEKAGLKLNIQKRKIM 237
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 71.3 bits (167), Expect = 8e-12
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDK-GISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
++SP LF E + +++ DW+ GI++ G I++LR+ADD ++A T +++ +L L
Sbjct: 207 VISPKLFTTALEDVFKLL--DWNGFGININGEYITHLRFADDIVVMAETVEDLNTMLDGL 264
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTI-TNAGGCEDE 355
+ GL +N DKTK+M R + P E+V++YVYLG T+ E E
Sbjct: 265 SRASQQVGLKMNMDKTKIMSNARV-VPTPLKVGDTTLELVDNYVYLGQTVQLGRSNFEKE 323
Query: 356 IRRR 367
+ RR
Sbjct: 324 VNRR 327
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 68.9 bits (161), Expect = 4e-11
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR-KISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ GI GR ++ +L +ADD LL+ T+ +++ +
Sbjct: 694 LLSPFLFLLVIDWIMKTSTSGGMHGIQWTGRMQLDDLDFADDLALLSQTQQQMQEKTTSV 753
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL IN+ K+K + + N P E V + YLGS I GG + ++
Sbjct: 754 AAASAAVGLNINKGKSKTLRYNTICTN-PITLDGEALEDVEIFTYLGSIIDEHGGSDADV 812
Query: 359 RRRCAVTRSSVERLTKIWRDRRITKN 436
R R R++ +L IW ++++ N
Sbjct: 813 RARIGKARAAYLQLKNIWSSKQLSTN 838
>UniRef50_UPI0000F33F15 Cluster: UPI0000F33F15 related cluster; n=1;
Bos taurus|Rep: UPI0000F33F15 UniRef100 entry - Bos
Taurus
Length = 136
Score = 68.5 bits (160), Expect = 6e-11
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
ILSP LFN Y +YIMR L++ GI + GR I+NLRYADDTTL+A + +E++ LL ++
Sbjct: 74 ILSPCLFNFYAQYIMRNAGLKEAQAGIKIAGRNINNLRYADDTTLMAGSEEELKSLLMKV 133
Query: 179 E 181
+
Sbjct: 134 K 134
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 66.1 bits (154), Expect = 3e-10
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Frame = +2
Query: 8 SPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
SP F E I + + DW KGI++ G+ +S+LR+ADD +++ +++E++L+ L+
Sbjct: 148 SPKFFTACLESIFKTL--DWSSKGININGKNMSHLRFADDIVIISHNLNDLEIMLQELDD 205
Query: 185 TALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCED-EIR 361
+ GL +N KTK+M A +P + E V Y+YLG + +D EIR
Sbjct: 206 ASRLTGLKMNMKKTKVM-AGSAKDPKPIQVNGTKMEQVEDYIYLGQRFSLQDKNQDNEIR 264
Query: 362 RR 367
RR
Sbjct: 265 RR 266
>UniRef50_UPI0000F317A8 Cluster: UPI0000F317A8 related cluster; n=1;
Bos taurus|Rep: UPI0000F317A8 UniRef100 entry - Bos
Taurus
Length = 144
Score = 61.3 bits (142), Expect = 9e-09
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 20 FNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+N Y EYIM LE+ GI + GR I+NLRYADDTTL+A + +E+++LL +++
Sbjct: 88 YNFYAEYIMTNAGLEETQAGIKIAGRNINNLRYADDTTLMAESEEELKILLMKVK 142
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I+NLRYADDTTL+A + +E++ LL +++ + GL +N K KM + I ++
Sbjct: 2 INNLRYADDTTLMAESEEELKSLLMKVKGESERVGLKLNIQKNKMA---PSPITSWQIDG 58
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRR 424
E V +++LGS IT C EI+R + R ++ L + +R
Sbjct: 59 -ETVETVTDFIFLGSKITADDDCSHEIKRHLLLGRKAMTNLDSYIKKQR 106
>UniRef50_UPI0000F32B3B Cluster: UPI0000F32B3B related cluster; n=1;
Bos taurus|Rep: UPI0000F32B3B UniRef100 entry - Bos
Taurus
Length = 137
Score = 60.1 bits (139), Expect = 2e-08
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LL N+Y EYIMR LE+ GI + R I+NLRYADDTTL+A + +E++ LL +++
Sbjct: 79 LLGNLYAEYIMRNAGLEETQTGIKIAERNINNLRYADDTTLMAESEEELKSLLMKVK 135
>UniRef50_UPI0000F34253 Cluster: UPI0000F34253 related cluster; n=2;
Bos taurus|Rep: UPI0000F34253 UniRef100 entry - Bos
Taurus
Length = 140
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 LFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LFN+Y E IMR LE+ GI + R ISNLRYADDTT +A + +E++ LL +++
Sbjct: 83 LFNLYAECIMRNTGLEEAQAGIKIARRNISNLRYADDTTFMAESEEELKSLLMKVK 138
>UniRef50_UPI0000F33C12 Cluster: UPI0000F33C12 related cluster; n=1;
Bos taurus|Rep: UPI0000F33C12 UniRef100 entry - Bos
Taurus
Length = 131
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
L F +Y EYIMR LE+ GI + GR I+NLRYADDTTL A + ++++ L +++
Sbjct: 73 LFFLLYAEYIMRNAGLEETQAGIKIAGRNINNLRYADDTTLTAESEEQLKSFLMKVK 129
>UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1253
Score = 56.4 bits (130), Expect = 3e-07
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGIS----------VGGRKISNLRYADDTTLLASTRDE 154
L+P LF I +Y +R ++ ++ + VG I++L +ADD LL+ ++
Sbjct: 958 LAPYLFVIVLDYALRAAIDGHEEELGFQLERRRSRRVGPEIITDLDFADDIALLSEELEQ 1017
Query: 155 IEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITN 334
+ LL R+ET+ GL +N KTK M + I + E V + YLG+ + +
Sbjct: 1018 AQKLLSRVETSVGKVGLRMNSGKTKFMSFNHRGIITIKTNDETQLENVPDFKYLGALMVS 1077
Query: 335 AGGCEDEIRRRCAVTRSSVERLTKIWR 415
E +++ R + + +L +IW+
Sbjct: 1078 T---EKDVKARKSAAWRACSKLGRIWK 1101
>UniRef50_Q6UE74 Cluster: ORF2; n=24; Tetrahymena thermophila|Rep:
ORF2 - Tetrahymena thermophila
Length = 1147
Score = 56.0 bits (129), Expect = 3e-07
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+LFN E + +LE W K + + + +ADD ++ LL L+
Sbjct: 778 LSPILFNYLYEEVRVKILEIW-KSKKLDCQDLHFELFADDMLIILKKYKLTATLLEVLKQ 836
Query: 185 TALDFGLAINRDKTKMMIVDRANI---NQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDE 355
D L IN KTK+M++ + + +++ G ++V + YLG I N G +
Sbjct: 837 AYRDINLQINESKTKIMLIGKQETYIKDSLKLRQAKGIDLVMEFKYLGLVINNVGKIHKD 896
Query: 356 IRRRCAVTRSSVERLTKIWRDRRI 427
+ ++ ++ + L K WR ++
Sbjct: 897 VAKKVEKAKNLTQML-KRWRYNKL 919
>UniRef50_UPI0000F30CF6 Cluster: UPI0000F30CF6 related cluster; n=1;
Bos taurus|Rep: UPI0000F30CF6 UniRef100 entry - Bos
Taurus
Length = 137
Score = 55.6 bits (128), Expect = 4e-07
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 29 YTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
Y EYIM+ LE+ GI + GR I+NLRYADDTTL+A + E++ LL +++
Sbjct: 84 YAEYIMKNAGLEETQAGIKIAGRNINNLRYADDTTLMAESEKELKSLLMKVK 135
>UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Deuterostomia|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 604
Score = 55.2 bits (127), Expect = 6e-07
Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF+I+ ++ D+++G+ + R+ + L +AD
Sbjct: 293 VLAPTLFSIFLSAMLEEAFADFEEGVYIQSRQDADLFNVAHFKAKTKSTQILVRELLFAD 352
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV-- 295
D+ L++ T ++++ ++ + + FGL IN KT+++ + + E + G +
Sbjct: 353 DSALVSHTPEQMQHVIDVFSSASKKFGLQINIKKTEVLFQPGTDHLEEEEILVDGTALNQ 412
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
V+ + YLGSTI+ G + E+ +R + S+ RL T++W + ++
Sbjct: 413 VDDFTYLGSTISKDGRIDSELVKRMSKASSAFGRLRTRLWNNHHVS 458
>UniRef50_UPI0000E46FAA Cluster: PREDICTED: similar to Rte-1
element; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Rte-1 element - Strongylocentrotus
purpuratus
Length = 395
Score = 55.2 bits (127), Expect = 6e-07
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +2
Query: 26 IYTEYIMRIVLEDW-DKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFG 202
I+TE I + + + GI++ G +++LR+ADD L++++ ++E L L + G
Sbjct: 269 IFTENIEEVFKKSHLNGGINIDGETLTDLRFADDVALISTSTKDLEDQLTGLNRKSKRIG 328
Query: 203 LAINRDKTKMMIVDRANINQPEVQHIAG--CEVVNSYVYLGSTITNAGGCEDEIRRR 367
L ++++KTK M N + E I G E V+SY YLG T+ ++E+ R
Sbjct: 329 LTMHKEKTKYM----TNYDTDENIEIEGRTLERVSSYKYLGQTLKMEDTTKEEVMMR 381
>UniRef50_UPI0000F31F50 Cluster: UPI0000F31F50 related cluster; n=1;
Bos taurus|Rep: UPI0000F31F50 UniRef100 entry - Bos
Taurus
Length = 137
Score = 54.8 bits (126), Expect = 8e-07
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+L +Y EYIMR LE+ GI + R I++LRYADDTTL+A + +E++ LL +++
Sbjct: 79 MLEQLYAEYIMRNAGLEETQAGIKIARRNINHLRYADDTTLMAESEEELKSLLMKVK 135
>UniRef50_UPI0000F316BC Cluster: UPI0000F316BC related cluster; n=1;
Bos taurus|Rep: UPI0000F316BC UniRef100 entry - Bos
Taurus
Length = 134
Score = 54.8 bits (126), Expect = 8e-07
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
IL +LFN Y EYIMR LE+ GI + G I+NL YADDT L+A + +E++ LL ++
Sbjct: 73 ILKEILFNFYAEYIMRNAGLEETQTGIRLPG-NINNLSYADDTILMAESEEELKSLLMKV 131
Query: 179 E 181
+
Sbjct: 132 K 132
>UniRef50_A0NG79 Cluster: ENSANGP00000027469; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027469 - Anopheles gambiae
str. PEST
Length = 371
Score = 54.4 bits (125), Expect = 1e-06
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
L+ LLFN+ E +R + I +I L YADD ++ R + + +E
Sbjct: 213 LACLLFNLTLERAIRDSRVETTGTIFYKSTQI--LAYADDIDIIGLRRSYVAEAYQGIEQ 270
Query: 185 TALDFGLAINRDKTKMMIVDRAN--INQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
A GL IN KTK+M+ A+ IN P + +V + YLGS ++N E E+
Sbjct: 271 AAESLGLQINEAKTKLMVATSADLPINNPNL-------LVPEFTYLGSKVSNDNSMEAEL 323
Query: 359 RRRCAVTRSSVERLTKIWRDRRITK 433
R R S L K + + +++
Sbjct: 324 RARMLAANRSFYSLKKQFTSKNLSR 348
>UniRef50_O16589 Cluster: Putative uncharacterized protein F21E9.5;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein F21E9.5 - Caenorhabditis elegans
Length = 864
Score = 53.6 bits (123), Expect = 2e-06
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 71 KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM----- 235
+GI V G+ ++NLR+ADD L+A +L L GL IN KTK++
Sbjct: 558 EGIRVNGQNLTNLRFADDIVLVAHNPRTASQMLTELVEKCSSVGLKINTGKTKVLRNRFA 617
Query: 236 IVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRR 367
+ I P +I + VN Y+YLG I ++ E+ RR
Sbjct: 618 YKRKVEIRCPNTTNII-IDDVNEYIYLGRQINDSNNLLPELHRR 660
>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
Caenorhabditis elegans|Rep: Uncharacterized protein
F52C9.6 - Caenorhabditis elegans
Length = 279
Score = 52.8 bits (121), Expect = 3e-06
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +2
Query: 83 VGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM---IVDRAN 253
V GR ++NLR+ADD L+A+ + +L+ L + GL IN KTK++ + D +
Sbjct: 3 VNGRNLTNLRFADDIVLIANHPNTASKMLQELVQKCSEVGLEINTGKTKVLRNRLADPSK 62
Query: 254 INQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRR 367
+ + V+ Y+YLG I EI RR
Sbjct: 63 VYFGSPSSTTQLDDVDEYIYLGRQINAHNNLMPEIHRR 100
>UniRef50_UPI0000F32266 Cluster: UPI0000F32266 related cluster; n=1;
Bos taurus|Rep: UPI0000F32266 UniRef100 entry - Bos
Taurus
Length = 138
Score = 52.0 bits (119), Expect = 5e-06
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 32 TEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+EYIMR L++ GI + GR I+NLRYADDTTL+ + +E++ LL +++
Sbjct: 86 SEYIMRNTGLDEAQAGIKIAGRNINNLRYADDTTLMEESEEELKSLLMKVK 136
>UniRef50_UPI0000F342D3 Cluster: UPI0000F342D3 related cluster; n=1;
Bos taurus|Rep: UPI0000F342D3 UniRef100 entry - Bos
Taurus
Length = 139
Score = 51.6 bits (118), Expect = 7e-06
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 LFNIYTEYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
L Y EYIMR LE+ GI + R I+NLRYA+DTTL+ + +E++ LL +++
Sbjct: 82 LSKFYAEYIMRNAGLEEAQAGIKIARRNINNLRYANDTTLMTESEEELKSLLMKVK 137
>UniRef50_UPI0000E46857 Cluster: PREDICTED: similar to bcnt,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to bcnt, partial - Strongylocentrotus
purpuratus
Length = 434
Score = 51.2 bits (117), Expect = 9e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
+SP LFNI E +M + +++ G + G I+NLR+ADD L+A T +E++ L+ +
Sbjct: 371 ISPQLFNILIELVMTMAMDEVQIGAKIQGTCINNLRFADDIVLIAETPEELQTLVDSKDR 430
Query: 185 TA 190
+A
Sbjct: 431 SA 432
>UniRef50_UPI0000F305E2 Cluster: UPI0000F305E2 related cluster; n=2;
Bos taurus|Rep: UPI0000F305E2 UniRef100 entry - Bos
Taurus
Length = 136
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 35 EYIMRIV-LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
EYIMR LE+ GI + R I+NLRYADDTTL+A + +E++ +L +++
Sbjct: 85 EYIMRNAGLEEAQAGIKIARRNINNLRYADDTTLMAESEEELKSILMKVK 134
>UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to reverse transcriptase-like -
Ornithorhynchus anatinus
Length = 176
Score = 50.4 bits (115), Expect = 2e-05
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV-LEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRR 175
ILSP LF + TE++MR L++ D +G+ GGR +NLR A T LLA ++D+++ LL +
Sbjct: 15 ILSPYLFILDTEHLMREAGLDESDQRGVKNGGRDTNNLRSAAATALLAESQDDLKGLLLK 74
Query: 176 LETTALDFGLAINRDKTKM 232
+ + + L +N K M
Sbjct: 75 GKEQSTELDLHLNVKKKVM 93
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 48.0 bits (109), Expect = 9e-05
Identities = 27/93 (29%), Positives = 51/93 (54%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
++E L+R+++ + GL +N KT +M + + E V +V+LGS I
Sbjct: 23 DLEYLVRKVKEESEHMGLYLNIKKTNVMTTACNGTVHITIDN-EEIESVQDFVFLGSKID 81
Query: 332 NAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
+ G EIR+R A+ RS+++ + K+W+ + I+
Sbjct: 82 HNGESGPEIRQRIALGRSAMQGMEKVWKSKVIS 114
>UniRef50_Q226T9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 416
Score = 48.0 bits (109), Expect = 9e-05
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+LFN E + +LE W K + + + +ADD ++ LL L+
Sbjct: 219 LSPILFNYLYEEVRVKILEIW-KSKKLDCQDLHFELFADDMLIILKQYKLTATLLEVLKQ 277
Query: 185 TALDFGLAINRDKTKMMIVDRANI---NQPEVQHIAGCEVVNSYVYLGSTITNAG 340
+ L IN KTK+M++ + + ++ G ++V + YLG I N G
Sbjct: 278 AYHEINLQINESKTKIMLIGKQETYIKDSLRLRQAKGLDLVMEFKYLGLVINNVG 332
>UniRef50_Q03278 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R2 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R2) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Nasonia vitripennis|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R2)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Nasonia vitripennis (Parasitic wasp)
Length = 1025
Score = 48.0 bits (109), Expect = 9e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSPLLFN + ++R + E+ G +G KI L +ADD LLA TR+ ++ L R+E
Sbjct: 519 LSPLLFNCVMDAVLRRLPEN--TGFLMGAEKIGALVFADDLVLLAETREGLQASLSRIEA 576
Query: 185 TALDFGL 205
+ GL
Sbjct: 577 GLQEQGL 583
>UniRef50_Q226R4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 355
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/78 (28%), Positives = 44/78 (56%)
Frame = +2
Query: 26 IYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGL 205
+Y +Y + + E K G+++ L +ADD ++A E+E ++++ E+T +GL
Sbjct: 37 LYIQYQQQALQEVESKIYMQTGKELDFLAFADDLAIIAEDTLEMEAIVKQFESTMAYYGL 96
Query: 206 AINRDKTKMMIVDRANIN 259
+N+ KT+ MI++ N
Sbjct: 97 QVNQSKTEYMIMNETRKN 114
>UniRef50_UPI0000F31803 Cluster: UPI0000F31803 related cluster; n=2;
Bos taurus|Rep: UPI0000F31803 UniRef100 entry - Bos
Taurus
Length = 106
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +2
Query: 56 LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LE+ GI + R I+NLRYADDTTL+A + +E++ LL +++
Sbjct: 63 LEETQVGIKIARRNINNLRYADDTTLMAESEEELKSLLMKVK 104
>UniRef50_UPI00006CD1CA Cluster: hypothetical protein
TTHERM_00129610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00129610 - Tetrahymena
thermophila SB210
Length = 835
Score = 46.4 bits (105), Expect = 3e-04
Identities = 32/112 (28%), Positives = 57/112 (50%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNIY E +M+ ++ I K+ YADD ++ + ++ ++++L
Sbjct: 533 LSPGLFNIYMEDVMKTLISQVQSPI---WYKV----YADDLVIITQIQ-HLKRVIQQLRQ 584
Query: 185 TALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG 340
L++ L IN +K+ ++ + I+ ++ G +VN Y YLG I G
Sbjct: 585 ICLEYKLIINNNKSAVLPLKNYQIDSNSIE---GIPIVNQYKYLGINIDGNG 633
>UniRef50_Q678G0 Cluster: RNA-dependent DNA polymerase; n=1;
Lymphocystis disease virus - isolate China|Rep:
RNA-dependent DNA polymerase - Lymphocystis disease
virus - isolate China
Length = 483
Score = 46.4 bits (105), Expect = 3e-04
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LSPLLF I E + + ++ KGI G++ L YADD + S + + ++L+ LE
Sbjct: 342 LSPLLFIIAMEPLACSIRKNPAIKGIIRKGKETKILLYADDVLIFVSQIETVPLVLKILE 401
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
+ G +++ +K+K++ + +A I + I+ ++ ++YLG TIT
Sbjct: 402 RFKIVSGYSLSLNKSKIVPLGQAKIKKSISLTIS----IDDFIYLGVTIT 447
>UniRef50_O44323 Cluster: Reverse transcriptase; n=1; Forficula
auricularia|Rep: Reverse transcriptase - Forficula
auricularia (European earwig)
Length = 1033
Score = 46.0 bits (104), Expect = 4e-04
Identities = 24/79 (30%), Positives = 48/79 (60%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+LFN+ + ++R + ++ G++VG + + L +ADD L A+T + ++ + +
Sbjct: 519 LSPILFNLVMDRMIRKLPKE--VGVNVGSKHYNGLTFADDLLLFATTPEGLQSSIDIVHL 576
Query: 185 TALDFGLAINRDKTKMMIV 241
L+ GL IN+ K+ ++ V
Sbjct: 577 FLLECGLLINKQKSFVLTV 595
>UniRef50_A7S2E3 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 428
Score = 45.2 bits (102), Expect = 6e-04
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Frame = +2
Query: 29 YTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGL 205
Y +I+R + + GI K+ +L +ADD LL+ST+ I+ +L+ A GL
Sbjct: 53 YWSWILRRSVGKGENGIRWKFTSKLDDLDFADDIALLSSTKHHIQEKTAKLDGEARGAGL 112
Query: 206 AINRDKTKMMIVDRAN-----INQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRRC 370
IN +KTKM+ ++ IN E++ ++ E +S + +T +A C + + +
Sbjct: 113 KINLEKTKMLRINAKQHGNTVINGKEIEDVS--EFTDSPME-WTTPHDAALCREVLLQNP 169
Query: 371 AVTRSSVERLTKIWR 415
R + KIW+
Sbjct: 170 YTERKKTTQRAKIWQ 184
>UniRef50_P11369 Cluster: Retrovirus-related Pol polyprotein LINE-1
(Long interspersed element- 1) (L1) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=566;
cellular organisms|Rep: Retrovirus-related Pol
polyprotein LINE-1 (Long interspersed element- 1) (L1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Mus musculus (Mouse)
Length = 1281
Score = 45.2 bits (102), Expect = 6e-04
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTL-LASTRDEIEVLLRRL 178
LSP LFNI E + R + + + KGI +G ++ ADD + ++ ++ LL +
Sbjct: 670 LSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLLADDMIVYISDPKNSTRELLNLI 729
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVV-NSYVYLGSTITNAGGCEDE 355
+ G IN +K+ + + + E++ +V N+ YLG T+T +D
Sbjct: 730 NSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTLTKE--VKDL 787
Query: 356 IRRRCAVTRSSVERLTKIWRD 418
+ + ++ + W+D
Sbjct: 788 YDKNFKSLKKEIKEDLRRWKD 808
>UniRef50_Q226S2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 326
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/57 (31%), Positives = 37/57 (64%)
Frame = +2
Query: 89 GRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN 259
G+++ L +ADD ++A E+E ++++ E+T +GL +N++KT+ MI++ N
Sbjct: 4 GKELDFLAFADDLAIIAEDTLEMEAIVKQFESTMSYYGLQVNQNKTEYMIMNETRKN 60
>UniRef50_A5B034 Cluster: Putative uncharacterized protein; n=5; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1927
Score = 44.0 bits (99), Expect = 0.001
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDE-IEV 163
LSP LF + + + R+++ ++ + G R ++S+L++ADDT ++TR+E ++
Sbjct: 1351 LSPFLFTLVADVLSRMLVRAEERNMLEGFRVGRNRTRVSHLQFADDTIFFSNTREEDLQT 1410
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTI---T 331
L L GL +N DK+ + ++ + + GC+ +YLG +
Sbjct: 1411 LKSLLLAFGHISGLKVNLDKSNIYGINLDXAHISRLAETLGCKASGXPILYLGLPLGGNP 1470
Query: 332 NAGGCEDEIRRR 367
AGG D + R
Sbjct: 1471 RAGGFWDPVIER 1482
>UniRef50_O44318 Cluster: Reverse transcriptase; n=1; Limulus
polyphemus|Rep: Reverse transcriptase - Limulus
polyphemus (Atlantic horseshoe crab)
Length = 1168
Score = 44.0 bits (99), Expect = 0.001
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISV--GGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+SP+LFNI + ++R LE+ +G G +S+L YADD LLA ++ +L +
Sbjct: 643 MSPILFNIALDPLLR-QLEEESRGFMFREGQAPVSSLAYADDMALLAKDHASLQSMLGTV 701
Query: 179 ETTALDFGLAINRDKTKMMIVDRAN 253
+ GL +N K+ +++ AN
Sbjct: 702 DKFCSGNGLGLNIAKSAGLLIRGAN 726
>UniRef50_Q339V4 Cluster: Retrotransposon protein, putative,
unclassified; n=5; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1265
Score = 43.6 bits (98), Expect = 0.002
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRDE-IEV 163
LSPLLFN+ + + I+ + ++GI G R +S+L+YADDT L D+ + V
Sbjct: 1071 LSPLLFNLVGDALAVILEKAKERGILKGLVPDLVPRGLSHLQYADDTILFIKVGDDNVRV 1130
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLGSTITNAG 340
L L G+ IN K+++ ++ + + ++ C+V + YLG +
Sbjct: 1131 LKFLLFCFEEMSGMKINYQKSEVYVLGVDKEEEIRIANMLNCKVGTMPFTYLGLPM---- 1186
Query: 341 GCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
CE + + VE+ + W+ +T
Sbjct: 1187 HCEKVGMKDFRLIIQKVEKRLQTWKSGYLT 1216
>UniRef50_A5B9W0 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1072
Score = 43.6 bits (98), Expect = 0.002
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDEIEVL 166
LSP LF I + + R++L ++ + G R ++S+L++ADDT +STR+E +
Sbjct: 934 LSPFLFTIVADVLSRMLLRADERNVLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDMMT 993
Query: 167 LRR-LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTI 328
L+ L GL +N DK+ + ++ + + + + C+ +YLG ++
Sbjct: 994 LKNVLLVFGHISGLKVNLDKSNIYDINLEHNHLFRLAEMLDCKASGWPILYLGLSL 1049
>UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to neprilysin-like protein - Nasonia vitripennis
Length = 979
Score = 43.2 bits (97), Expect = 0.002
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEI----EVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
L YAD +L R+ + E+L++ E T GL ++ KTK +IVD+ I + E
Sbjct: 719 LGYADVWDILGDCRETVARNTEILIKAAEYT----GLEVSESKTKYIIVDKLGICRGEGD 774
Query: 275 HIAG---CEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRITKN 436
G E V+ + YLG+TI + EI +R + ++ + + R ++KN
Sbjct: 775 LRVGNFTFEKVSEFRYLGTTINDRNETNVEINKRFHSGNTCFYAVSNLLKSRLLSKN 831
>UniRef50_Q9LDL8 Cluster: Putative uncharacterized protein
AT4g08830; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein AT4g08830 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 947
Score = 43.2 bits (97), Expect = 0.002
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +2
Query: 50 IVLEDWDK-GISVGGRKISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLAINRDK 223
+ +++W G+S GG KIS++ +ADD L A ++ +I V+ R LET + G ++ DK
Sbjct: 336 VAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDK 395
Query: 224 TKM 232
+K+
Sbjct: 396 SKI 398
>UniRef50_A5AFJ4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 817
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDK----GISVGGRKI--SNLRYADDTTLLASTRDEIEVL 166
LSP LF + + + R++L ++ G VG +I S+L++ADDT +STR+E ++
Sbjct: 223 LSPFLFTLVADVLSRMLLRAEERNALEGFRVGRNRIRVSHLQFADDTIFFSSTREEDMLI 282
Query: 167 LRR-LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L+ L GL +N DK+ + ++ + + + C+ +YLG
Sbjct: 283 LKSVLLVFGHISGLKVNLDKSNIYGINFEQNHLSRLAELLDCKASGWPILYLG 335
>UniRef50_A5B9I8 Cluster: Putative uncharacterized protein; n=3; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1863
Score = 42.7 bits (96), Expect = 0.003
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDE-IEV 163
LSP LF + + + R++L ++ + G R ++S+L++ADDT ++TR+E ++
Sbjct: 1313 LSPFLFTLVADVLSRMLLRAEERNMLEGFRVGRNRTRVSHLQFADDTIFFSNTREEDLQT 1372
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA 283
L L GL +N DK+ + + N++Q + +A
Sbjct: 1373 LKSLLLAFGHISGLKVNLDKSNIYGI---NLDQAHISRLA 1409
>UniRef50_A5AI05 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1031
Score = 42.7 bits (96), Expect = 0.003
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDEIEVL 166
LSP LF I + + R++L+ ++ + G R ++S+L++ADDT +S+R+E +
Sbjct: 543 LSPFLFTIVADVLSRMLLKAEERNVLEGFRVGRNRTRVSHLQFADDTIFFSSSREEDMMT 602
Query: 167 LRR-LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L+ L GL +N DK+ + ++ + + + C+ +YLG
Sbjct: 603 LKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKXXGWPILYLG 655
>UniRef50_A7SDI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1079
Score = 42.7 bits (96), Expect = 0.003
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Frame = +2
Query: 89 GRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDR--ANINQ 262
G +++L YADD L++++ ++ + ++ D+ +++N+ KTK++I+ + +N
Sbjct: 531 GVPLNSLFYADDLVLISTSASGLQKSINLIDQFCKDWLMSVNQKKTKVVIIQKQCRKLNL 590
Query: 263 PEVQ-HIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSV 391
+ + + G ++ V Y YLG T T G R TR S+
Sbjct: 591 QKFRFFLNGSQLDNVTEYKYLGCTFTTNGNFTTSKLRSVEKTRRSI 636
>UniRef50_Q7YXU7 Cluster: ORF2; n=1; Girardia tigrina|Rep: ORF2 -
Dugesia tigrina (Planarian)
Length = 1171
Score = 42.3 bits (95), Expect = 0.004
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LS LLFNI+ I+R + D G +G I L YADD L++ + +++ ++ + E
Sbjct: 500 LSMLLFNIFINIIIRAIEAMPDVHGYPLGDMDIRILAYADDIALISDSHKDLQEMVYKAE 559
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEV----QHIAGCEVVNSYVYLGS 322
GL N K +M + P + + I + Y YLG+
Sbjct: 560 YIGRILGLLFNPSKCALMDIPHDKKRTPPILVNGEMIKCVGKADPYKYLGT 610
>UniRef50_O99970 Cluster: Orf546; n=2; Porphyra purpurea|Rep: Orf546
- Porphyra purpurea
Length = 546
Score = 41.9 bits (94), Expect = 0.006
Identities = 33/131 (25%), Positives = 56/131 (42%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
I+SPLL NI L +K + G + +RYADD +L + E+ ++E
Sbjct: 228 IISPLLANI--------ALHGMEKAVCKSG--VYLIRYADDFLILCNEEKELSEAKNKIE 277
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIR 361
+ GL ++ KTK+ + ++ + G VN V ++ N G +
Sbjct: 278 IFLQNLGLKLSESKTKITYTGSSEYSRTKGVDFLGFNFVNYKVGKHTSAKNNQGIATGWK 337
Query: 362 RRCAVTRSSVE 394
RC + S+E
Sbjct: 338 SRCQPSYKSIE 348
>UniRef50_A5C9W0 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1527
Score = 41.9 bits (94), Expect = 0.006
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDE-IEV 163
LSP LF + + + R++L ++ + G R ++S+L++ADDT ++TR+E ++
Sbjct: 1157 LSPFLFTLVVDVLSRMLLRAEERNMLEGFRMGRNRTRVSHLQFADDTIFFSNTREEDLQT 1216
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA 283
L L GL +N DK+ + + N++Q + +A
Sbjct: 1217 LKSLLLAFGHISGLKVNLDKSNIYGI---NLDQAHLSRLA 1253
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 41.9 bits (94), Expect = 0.006
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTR--DEIEVL--- 166
+L P L+N+ + ++R+ + V G +I + YADD LL D+IE+L
Sbjct: 610 VLGPTLWNLMYDGVLRVAM--------VEGARI--IGYADDIVLLVEGNCVDDIEILVSS 659
Query: 167 -LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGG 343
+R ++ D GL I KT+ ++V + +QH A V + V+ T+ G
Sbjct: 660 QIRIIDRWMTDNGLKIAPTKTEFIMVS----SHQRIQHGA-IRVGDHVVHSSRTLKYLGM 714
Query: 344 CEDEIRRRCAVTRSSVERLTKIW 412
D+ + R +VER TK+W
Sbjct: 715 VLDDRLEYTSHIRYAVERATKLW 737
>UniRef50_A1WV30 Cluster: RNA-directed DNA polymerase; n=1;
Halorhodospira halophila SL1|Rep: RNA-directed DNA
polymerase - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 221
Score = 41.5 bits (93), Expect = 0.008
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL N++ ++ E K G ++ +RYADD LL RD+ E +L+ L
Sbjct: 1 MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQL--VRYADDAVLLFKLRDDAERVLKVLP 58
Query: 182 TTALDFGLAINRDKTKMMIVDR--ANINQP 265
+GL ++ +KT+++ R N+ +P
Sbjct: 59 RRFEKYGLELHPEKTRLIGFQRPPRNVKRP 88
>UniRef50_A5APK6 Cluster: Putative uncharacterized protein; n=2; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1166
Score = 41.5 bits (93), Expect = 0.008
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTR-DEIEV 163
LSP LF + + + R++L ++ + G R ++++L++ADDT ++TR +E++
Sbjct: 834 LSPFLFTLVADVLSRMLLRAEERNLLEGFRVXKNRTRVTHLQFADDTIFFSNTREEELQT 893
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA 283
L L GL +N DK+ ++ N++Q + +A
Sbjct: 894 LKSLLLVFGHISGLKVNLDKSN---INGINLDQNHLSRLA 930
>UniRef50_Q8LMT3 Cluster: Putative retroelement; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative retroelement -
Oryza sativa subsp. japonica (Rice)
Length = 764
Score = 41.1 bits (92), Expect = 0.010
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTL-LASTRDEIEVLLRRLE 181
LSPLLFN+ + + ++ + +++L+YADDT L + +T + I + L
Sbjct: 183 LSPLLFNLVADALSEMLNNAKQAVPHLVPGGLTHLQYADDTILFMTNTEENIVTVKFLLY 242
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTIT 331
GL IN K+++M++ + V + C+ + YLG I+
Sbjct: 243 CYEAMSGLKINYQKSEIMVIGGDEMETQRVADLFNCQAGKMPFTYLGIPIS 293
>UniRef50_A5C3A7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 964
Score = 41.1 bits (92), Expect = 0.010
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDEIEVL 166
LSP LF I + + R++L+ ++ + G R ++S+L++ADDT +STR+E +
Sbjct: 342 LSPFLFTIVADVLSRMLLKAEERNVLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDMMT 401
Query: 167 LRR-LETTALDFGLAINRDKTKM 232
L+ L GL +N +K+ +
Sbjct: 402 LKNVLLVFGHISGLKVNLNKSNI 424
>UniRef50_P16423 Cluster: Retrovirus-related Pol polyprotein from
type-2 retrotransposable element R2DM
(Retrovirus-related Pol polyprotein from type II
retrotransposable element R2DM) [Includes: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=26; Drosophila|Rep: Retrovirus-related
Pol polyprotein from type-2 retrotransposable element
R2DM (Retrovirus-related Pol polyprotein from type II
retrotransposable element R2DM) [Includes: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Drosophila melanogaster (Fruit fly)
Length = 1057
Score = 41.1 bits (92), Expect = 0.010
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+LFN+ + ++R + + G VG + +ADD L A TR ++VLL +
Sbjct: 545 LSPILFNLVMDRLLRTLPSEI--GAKVGNAITNAAAFADDLVLFAETRMGLQVLLDKTLD 602
Query: 185 TALDFGLAINRDK 223
GL +N DK
Sbjct: 603 FLSIVGLKLNADK 615
>UniRef50_A5BH71 Cluster: Putative uncharacterized protein; n=15;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 2077
Score = 40.7 bits (91), Expect = 0.013
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDEIEVL 166
LSP LF I + + R++L+ ++ + G R ++S+L++A+DT +STR+E +
Sbjct: 1037 LSPFLFTIVADVLSRMLLKVEERNVLEGFRVGRNRTRVSHLQFANDTIFFSSTREEDMMT 1096
Query: 167 LRR-LETTALDFGLAINRDKTKM 232
L+ L GL +N DK+ +
Sbjct: 1097 LKNVLLVFGHISGLKVNLDKSNI 1119
>UniRef50_A5AM90 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1215
Score = 40.7 bits (91), Expect = 0.013
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDK----GISVG--GRKISNLRYADDTTLLASTRDE-IEV 163
LSPLLF + + + R++L ++ G VG ++S+L++ADDT ++T +E ++
Sbjct: 1091 LSPLLFTLVADVLSRMLLRAXERNSLXGFRVGRNNTRVSHLQFADDTIFFSNTSEEDLQT 1150
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA 283
L L GL +N DK+ + + N+ Q + +A
Sbjct: 1151 LKSLLLVFXHISGLKVNLDKSNIYGI---NLEQNHLSRLA 1187
>UniRef50_A5BE08 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1106
Score = 40.3 bits (90), Expect = 0.018
Identities = 27/113 (23%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDE-IEV 163
LSP LF + + + +++L ++ + G R ++++L++ADDT ++ R+E ++
Sbjct: 982 LSPFLFTLVPDVLSKMLLRAEERNLFEGFRVGRNRTRVTHLQFADDTIFFSNAREEDLQT 1041
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L L FGL +N +K+ + ++ + + + C+V +YLG
Sbjct: 1042 LKSLLLVFGHIFGLKVNLNKSNIYGINLDQNHLSRLAELLDCKVSGWPILYLG 1094
>UniRef50_Q64B18 Cluster: Retron type reverse transcriptase; n=17;
cellular organisms|Rep: Retron type reverse
transcriptase - uncultured archaeon GZfos28B8
Length = 597
Score = 40.3 bits (90), Expect = 0.018
Identities = 27/91 (29%), Positives = 42/91 (46%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP+L NIY Y + + E K G ++ +RYADD + DE + L
Sbjct: 374 LLSPILANIYLHYALDLWFEKEVKEQLKGFAQL--VRYADDFIVCFQYDDEARAFGKALR 431
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
FGL I+ +K++++ R Q Q
Sbjct: 432 VRLAKFGLTISEEKSRIIKFGRYACQQARKQ 462
>UniRef50_Q6QI57 Cluster: LRRGT00151; n=3; Rattus norvegicus|Rep:
LRRGT00151 - Rattus norvegicus (Rat)
Length = 1073
Score = 39.9 bits (89), Expect = 0.023
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTL-LASTRDEIEVLLRRL 178
LSP LFNI E + R + + + KGI +G ++ +ADD + L+ + LL+ +
Sbjct: 128 LSPYLFNIVLEVLARAIRQQKEVKGIQIGKEEVKISLFADDMIVYLSDPKSSTRELLKLI 187
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLGSTIT 331
+ G IN +K+ + + + E++ + N+ LG T+T
Sbjct: 188 NNFSKVAGYKINSNKSLAFLYTKEKQAEKEIRETTPFIIDPNNIKDLGVTLT 239
>UniRef50_Q9AN84 Cluster: ID459; n=40; root|Rep: ID459 -
Bradyrhizobium japonicum
Length = 491
Score = 39.9 bits (89), Expect = 0.023
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL NIY Y + + + W + GG I +RYADD + D+ L +
Sbjct: 264 VISPLLGNIYLHYALDLWAKRWRQREVSGGMII--VRYADDVVVGFEREDDARRFLDAMR 321
Query: 182 TTALDFGLAINRDKTKMM 235
+F L ++ KT+++
Sbjct: 322 ARLEEFELTLHPAKTRLI 339
>UniRef50_Q8RSV8 Cluster: Maturase; n=1; uncultured marine
bacterium|Rep: Maturase - uncultured marine bacterium
Length = 386
Score = 39.9 bits (89), Expect = 0.023
Identities = 31/108 (28%), Positives = 52/108 (48%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL N+Y E +D+ IS +I RYADD + + ++ +L +L+
Sbjct: 168 VISPLLANLYLH-------EAFDQWISTTQPRIVFERYADDIVIHTRSMEQSHFILDKLK 220
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGST 325
+ L ++ DKTK++ R H G E+ S+ +LG T
Sbjct: 221 ARLKSYSLELHPDKTKIVYCYRT-----ARFHKEGKEIPVSFDFLGFT 263
>UniRef50_Q10PS2 Cluster: Retrotransposon protein, putative,
unclassified; n=4; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 581
Score = 39.9 bits (89), Expect = 0.023
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTL-LASTRDEIEV 163
LSP+LFN+ + + ++ D+G G +S L+YADDT L + DE++
Sbjct: 93 LSPILFNLVADMLSILIQRAKDQGRFQGVIPHLVDNGLSILQYADDTILFMEHDLDEVKN 152
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLG 319
L L T GL IN K+++ ++ + E + GC + YLG
Sbjct: 153 LKLVLSTFEKLAGLKINFHKSELFCYGKSKFAENEYVMLFGCRSGTYPFRYLG 205
>UniRef50_A3BMY1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 472
Score = 39.9 bits (89), Expect = 0.023
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 101 SNLRYADDTTLLASTRDEIEVLLRR-LETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
S L+YADDT ++ + L++R L+ + GL IN K+ M+ + +Q ++ +
Sbjct: 4 STLQYADDTLIICKASSQDVALIKRILDDFSSATGLEINYSKSTMVCIHVPPEDQVQLAN 63
Query: 278 IAGCEVVN-SYVYLG 319
+ GC + N YLG
Sbjct: 64 VLGCRLENFPQTYLG 78
>UniRef50_Q4F8Q3 Cluster: Reverse transcriptase; n=1; Aedes
aegypti|Rep: Reverse transcriptase - Aedes aegypti
(Yellowfever mosquito)
Length = 265
Score = 39.9 bits (89), Expect = 0.023
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LS LF +Y E ++R + +GI + R +ADD T++ +E +++ + ++
Sbjct: 72 LSMTLFVLYIEALIRQIYAGV-RGILIDNRFFKIRAFADDITIIIRNDEEFDLVFKIIDD 130
Query: 185 TALDFGLAINRDKTKMMIVDRANINQPEV 271
+L FG+ +N K+ + + I +V
Sbjct: 131 YSLSFGIKLNFKKSNFIRFNNCRIGPQKV 159
>UniRef50_Q8YLU0 Cluster: All5206 protein; n=1; Nostoc sp. PCC
7120|Rep: All5206 protein - Anabaena sp. (strain PCC
7120)
Length = 539
Score = 39.5 bits (88), Expect = 0.031
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNL---RYADDTTLLASTRDEIEVLLR 172
++SPLL NI + + E K + GGR+I + RYADD L D E L +
Sbjct: 251 VISPLLANIVLHGLENVGHELRYK-VRSGGRQIDTIKGFRYADDVVFLLKPEDNPEALRQ 309
Query: 173 RLETTALDFGLAINRDKTKMM 235
++T GL + KTK++
Sbjct: 310 NIDTFLEARGLKVKEAKTKIV 330
>UniRef50_Q1Q0X4 Cluster: Similar to Group II intron encoded reverse
transcriptase; n=6; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to Group II intron encoded
reverse transcriptase - Candidatus Kuenenia
stuttgartiensis
Length = 298
Score = 39.5 bits (88), Expect = 0.031
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL- 178
++SPLL N+ + I DK + G K +RYADD ++ T+DE+ L +
Sbjct: 198 VISPLLANLIGDII--------DKELEKAGYKF--VRYADDFVVMTKTKDELPAALSYVK 247
Query: 179 ETTALDFGLAINRDKTKMMIVDR 247
E A G+ ++ DKTK+ +R
Sbjct: 248 EIIAGKLGMKLSEDKTKLTNFER 270
>UniRef50_Q0ERZ4 Cluster: RNA-directed DNA polymerase; n=1;
Thermoanaerobacter ethanolicus X514|Rep: RNA-directed
DNA polymerase - Thermoanaerobacter ethanolicus X514
Length = 427
Score = 39.5 bits (88), Expect = 0.031
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+L NIY Y + + + G +RYADD +L + + + + L
Sbjct: 212 LSPILANIYLHYTLDVWFAYLKRNGKFRGEAYI-VRYADDFVMLFQYKSDADKMYEALPK 270
Query: 185 TALDFGLAINRDKTKMM 235
FGL + DKTK++
Sbjct: 271 RMAKFGLELAMDKTKIL 287
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 39.5 bits (88), Expect = 0.031
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN-INQPEVQHIAGC 289
+ADD L+ TRD + L T G ++R KT+ + ++ +++ +V+
Sbjct: 437 FADDIVLIDETRDRVNARLEVWRQTLESKGFRLSRTKTEYLGCKFSDGLDETDVEVRLAA 496
Query: 290 EVV---NSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
+V+ S+ YLG+ I +G +D++ R + + D++I+
Sbjct: 497 QVIPKKESFRYLGAVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKIS 546
>UniRef50_Q76IK7 Cluster: Pol-like protein; n=1; Ciona
intestinalis|Rep: Pol-like protein - Ciona intestinalis
(Transparent sea squirt)
Length = 1235
Score = 39.5 bits (88), Expect = 0.031
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Frame = +2
Query: 5 LSPLLFNIYTE-YIMRIVLEDWDKGISVGGRKISNLRYADDTT-LLASTRDEIEVLLRRL 178
LSPLLF + E + I L +GI+ +++ L +ADDT + + + +
Sbjct: 655 LSPLLFVLAIECFAQHIRLNQCIEGINTADKELKILLFADDTLCFINGSSGSFNAMSEEI 714
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ + G IN +K+ + Q I S+ YLG T G D
Sbjct: 715 RWSKVVSGCKINLEKSVTCAIGSMVKTQSRSTAIQLKWTKESFKYLGVTTAVPGSNLDFF 774
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
+ + S ++R+ +W R +T
Sbjct: 775 QINFSDPLSRIKRIINMWSRRGLT 798
>UniRef50_A6LY84 Cluster: RNA-directed DNA polymerase; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: RNA-directed
DNA polymerase - Clostridium beijerinckii NCIMB 8052
Length = 433
Score = 39.1 bits (87), Expect = 0.041
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
I+SP L NIY Y + + E K G +I+ RYADD E R L
Sbjct: 213 IVSPTLANIYLHYSLDLWFEKVIKRNFRGQSEIT--RYADDFVCCFQYESEARQFCRLLV 270
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGST 325
+ F L + R K+K+++ R E++ G + ++ +LG T
Sbjct: 271 SRLNKFNLEVERTKSKLILFGRF---AEEIRKSRGFKNAETFDFLGFT 315
>UniRef50_A5BYD5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 752
Score = 39.1 bits (87), Expect = 0.041
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDE-IEV 163
LSP LF + + R++L ++ + G R ++S+L++ADDT ++TR+E ++
Sbjct: 253 LSPFLFTLVAYVLSRMLLRAEERNMLEGFRVGRNRTRVSHLQFADDTIFFSNTREEDLQT 312
Query: 164 LLRRLETTALDFGLAINRDKTKM 232
L L GL +N DK+ +
Sbjct: 313 LKSLLLVFGHISGLKVNLDKSNI 335
>UniRef50_A5AGG3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 507
Score = 39.1 bits (87), Expect = 0.041
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 89 GRKISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQP 265
G KIS+L +ADDT + + D++ L L GL +N DK++++ V N
Sbjct: 337 GVKISHLLFADDTLIFCKANEDQVTFLSWLLMCFEAISGLQVNLDKSELIPVCNVE-NVE 395
Query: 266 EVQHIAGCEVVN-SYVYLG 319
E+ GC+V N ++ YLG
Sbjct: 396 ELAFELGCKVGNLTFTYLG 414
>UniRef50_Q2QYX0 Cluster: Retrotransposon protein, putative,
unclassified; n=5; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1214
Score = 38.7 bits (86), Expect = 0.054
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGI------SVGGRKISNLRYADDT-TLLASTRDEIEV 163
LSPLLF + E + R++ + + +G+ G ++YADDT LL +++ E+
Sbjct: 32 LSPLLFVLGGELLQRVINKAFHQGLLSKPINESSGDGFPIIQYADDTLILLKASQKEVFC 91
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L A GL +N +K+ + ++ + I GC++ + + YLG
Sbjct: 92 FKAILNMFAQSTGLKVNYNKSSLYPLNMPQDKAVLLSGILGCKIGSLPFTYLG 144
>UniRef50_Q49P04 Cluster: Reverse transcriptase-like protein; n=2;
Ixodidae|Rep: Reverse transcriptase-like protein -
Amblyomma americanum (lone star tick)
Length = 510
Score = 38.7 bits (86), Expect = 0.054
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +2
Query: 11 PLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTA 190
PL FN+ + + + + + G ++S + +ADD L AST+D ++ R+LE
Sbjct: 1 PLFFNLVIDEFLEGL--NHELAYRCQGLQVSAMAFADDLILAASTKDGLKEHTRKLENFL 58
Query: 191 LDFGLAINRDKTKMMIV 241
GL N +K+ +++
Sbjct: 59 SQRGLRANAEKSSTLVI 75
>UniRef50_Q94LN7 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative non-LTR retroelement
reverse transcriptase - Oryza sativa subsp. japonica
(Rice)
Length = 205
Score = 38.3 bits (85), Expect = 0.071
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGI------SVGGRKISNLRYADDTT-LLASTRDEIEV 163
LSPLLF + E + RIV + G+ + R ++YADDT+ LL + + E+
Sbjct: 79 LSPLLFVLGAELLQRIVNKACSLGLLTKSINELDERGFPIIQYADDTSILLKALQREVFC 138
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLG 319
L + A GL +N K+ + ++ ++ N + GC + + YLG
Sbjct: 139 FKALLNSFAHSTGLKVNYHKSCLYPINLSHENAVLFAGLLGCTIGTMPFTYLG 191
>UniRef50_Q7XNY0 Cluster: OSJNBb0015N08.11 protein; n=4; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0015N08.11
protein - Oryza sativa subsp. japonica (Rice)
Length = 1026
Score = 38.3 bits (85), Expect = 0.071
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD----KGISVGG-RKISNLRYADDTTLLASTR-DEIEVL 166
LSPLLFN+ E + +V + +G+ G KI+ L+YADDT L + + D + L
Sbjct: 447 LSPLLFNLAAEALTLLVQRAEENSLIEGLGTNGDNKIAILQYADDTIFLINDKLDHAKNL 506
Query: 167 LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTI 328
L GL IN +K+++ A Q +I C+V + YLG I
Sbjct: 507 KYILCLFEQLSGLKINFNKSEVFCFGEAKEKQDLYSNIFTCKVGSLPLKYLGIPI 561
>UniRef50_O44319 Cluster: Reverse transcriptase; n=1; Anurida
maritima|Rep: Reverse transcriptase - Anurida maritima
Length = 1151
Score = 38.3 bits (85), Expect = 0.071
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR-KISNLRYADDTTLLASTRDEIEVLLRRLE 181
LSP+LFN+ + I+R + E G+ + K++++ +ADD LL+S+ + +L L
Sbjct: 629 LSPILFNLVIDQIIRSLPET--VGVQLDANTKLNSMAFADDLILLSSSEAGMRRMLGVLA 686
Query: 182 TTALDFGLAINRDKTKMM 235
+ FGL + K K +
Sbjct: 687 GVSSKFGLIFHPGKCKYL 704
>UniRef50_Q10VN2 Cluster: RNA-directed DNA polymerase; n=3;
Cyanobacteria|Rep: RNA-directed DNA polymerase -
Trichodesmium erythraeum (strain IMS101)
Length = 437
Score = 37.9 bits (84), Expect = 0.094
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDR 247
K +RYADD + A + ++I+ ++ +E + GL +N+DKT ++ +++
Sbjct: 233 KYGFIRYADDFIITARSEEDIKAIIPTIEKWLSERGLELNKDKTNLVHIEQ 283
>UniRef50_A5BSZ6 Cluster: Putative uncharacterized protein; n=3; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1750
Score = 37.9 bits (84), Expect = 0.094
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTR-DEIEV 163
LSP LF + + + R+++ ++ + G R ++S+L++ADDT +++R +E++
Sbjct: 1246 LSPFLFTLVADVLSRMLMRAEERNMLEGFRVGRNRTRVSHLQFADDTIFFSNSREEELQT 1305
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L L GL +N +K+ + ++ + + + C+ +YLG
Sbjct: 1306 LKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLSRLAEMLDCKASGWPILYLG 1358
>UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: ReO_6
protein - Oryzias latipes (Medaka fish) (Japanese
ricefish)
Length = 971
Score = 37.5 bits (83), Expect = 0.12
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLR--- 172
+LSPLLF++YT G + ++ADDTT++ RD E R
Sbjct: 722 VLSPLLFSLYT------------NDCRSGAPSVKLFKFADDTTVIGLIRDGDETAYRGEV 769
Query: 173 -RLETTALDFGLAINRDKTKMMIVD-RANINQPEVQHIAGCEV--VNSYVYLGSTIT 331
RL + L +N KT M VD R N + P I V +S+ +LGSTI+
Sbjct: 770 ERLVLWSSQNHLELNPLKTVEMTVDFRRNPSTPPPLTILNSTVPSTDSHRFLGSTIS 826
>UniRef50_Q9YW31 Cluster: ORF MSV061 putative LINE reverse
transcriptase, similar to Caenorhabditis elegans
GB:U00063; n=1; Melanoplus sanguinipes
entomopoxvirus|Rep: ORF MSV061 putative LINE reverse
transcriptase, similar to Caenorhabditis elegans
GB:U00063 - Melanoplus sanguinipes entomopoxvirus
(MsEPV)
Length = 531
Score = 37.5 bits (83), Expect = 0.12
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 17 LFNIYTEYIMRIVLEDWDKGISVGGR-KISNLRYADDTTLLASTRDEIEVLLRRLETTAL 193
LFNIY ++IM + KGI + ++ + YADD ++++ +++ + L +
Sbjct: 301 LFNIYIDHIMNEWKQHNIKGIELNDNTNLNYILYADDLVIISTNKNDFIHGIDMLNNLSK 360
Query: 194 DFGLAINRDKTKMMIVDRANINQPEVQHIAG-CEVVNSYVYLGSTIT 331
+ L I+ +KTK+M E+ + V+ + YLG I+
Sbjct: 361 KYKLPISFEKTKVMAFKGTETINIEIYIDDNLIQQVDCFTYLGYEIS 407
>UniRef50_A5C481 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1773
Score = 37.5 bits (83), Expect = 0.12
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGR------KISNLRYADDTTLLASTRDEIEVL 166
LSP LF + + + R++L ++ + G R ++S+L++ADDT ++TR+E
Sbjct: 1270 LSPFLFTLVADVLSRMLLRAEERNMVEGFRVGRNRTRVSHLQFADDTIFFSNTREED--- 1326
Query: 167 LRRLETTALDFG 202
L+ L++ L FG
Sbjct: 1327 LQTLKSLLLAFG 1338
>UniRef50_Q76IL7 Cluster: Pol-like protein; n=3; Danio rerio|Rep:
Pol-like protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1284
Score = 37.1 bits (82), Expect = 0.16
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYI-MRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LS LL+ + E + + + ED KGI V G +YADDTTL+ ++ + ++
Sbjct: 671 LSALLYALVAEPLGLAVKHEDRIKGIEVEGGVNKIFQYADDTTLILQDLASVKQAMETVQ 730
Query: 182 TTALDFGLAINRDKT 226
G IN +KT
Sbjct: 731 HFCKGSGAKINENKT 745
>UniRef50_Q47526 Cluster: Reverse transcriptase; n=1; Escherichia
coli|Rep: Reverse transcriptase - Escherichia coli
Length = 312
Score = 37.1 bits (82), Expect = 0.16
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +2
Query: 38 YIMRIVLEDWDKGIS--VGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALD-FGLA 208
+I IV+ +D+ IS KIS RYADD T + RD + + ++++TT + FG
Sbjct: 156 FISNIVMSSFDEEISSFCKENKISYSRYADDLTFSTNERDVLGLAHQKVKTTLIRFFGTR 215
Query: 209 INRDKTKMMIVDRANINQPEVQHIAGCEVVNS 304
I + K++ +A+ +H+ G + N+
Sbjct: 216 IIINNNKIVYSSKAH-----NRHVTGVTLTNN 242
>UniRef50_Q08WW1 Cluster: Prophage LambdaSa1, reverse
transcriptase/maturase family protein; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Prophage LambdaSa1, reverse
transcriptase/maturase family protein - Stigmatella
aurantiaca DW4/3-1
Length = 421
Score = 37.1 bits (82), Expect = 0.16
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--ISNLRYADDTTLLASTRDEIEVLLRR 175
++SPLL N+Y Y VL++W + V K S +RYADD ++ + +L
Sbjct: 196 VISPLLANVYLHY----VLDEWYEREVVPRMKGKCSLIRYADDLVMVFEDFLDCRRVLEV 251
Query: 176 LETTALDFGLAINRDKTKMM 235
L +GL ++ KT+M+
Sbjct: 252 LGKRLAKYGLTLHPGKTRMV 271
>UniRef50_A4VK83 Cluster: Reverse transcriptase; n=1; Pseudomonas
stutzeri A1501|Rep: Reverse transcriptase - Pseudomonas
stutzeri (strain A1501)
Length = 342
Score = 37.1 bits (82), Expect = 0.16
Identities = 21/84 (25%), Positives = 42/84 (50%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP+L N++ Y + W + S RYADD + +R + E ++R +
Sbjct: 118 VVSPILMNLFMHY----AFDMWMQRTSAN---CPFARYADDAVVHCRSRKQAEYMMRTIA 170
Query: 182 TTALDFGLAINRDKTKMMIVDRAN 253
+ D GL ++ +K+K++ +N
Sbjct: 171 SRLADCGLTMHPEKSKIVYCKDSN 194
>UniRef50_Q7X6R8 Cluster: OSJNBa0071G03.15 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0071G03.15
protein - Oryza sativa subsp. japonica (Rice)
Length = 637
Score = 37.1 bits (82), Expect = 0.16
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGI------SVGGRKISNLRYADDTTLLAST-RDEIEV 163
LSPL++ + E + RIV ++ G+ + G ++YADDT +L T + EI
Sbjct: 507 LSPLIYVLGAELLQRIVNRAFNLGLISKPINANDGSGFPIIQYADDTLILLKTSQKEIFC 566
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVN-SYVYLG 319
L AL GL +N K+ + + N+++ + IAG C V + YLG
Sbjct: 567 FKALLNMFALSTGLKVNYAKSSLYPL---NLSEEKTDLIAGLLRCSVGKLPFTYLG 619
>UniRef50_A5C3Q7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1022
Score = 37.1 bits (82), Expect = 0.16
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Frame = +2
Query: 62 DWDKGISVGGRKISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLAINRDKTKMMI 238
DW KG S G +IS+L +ADD + +++D + L L GL +N +K++++
Sbjct: 384 DWVKGRSEKGVQISHLLFADDALVFCQASQDHLTYLSWLLMWFEAVSGLRLNLEKSELIS 443
Query: 239 VDRANINQPEVQHIAGCEVVN-SYVYLG-------STITNAGGCEDEIRRRCAVTRSSVE 394
V R N ++ GC V + YLG ++T G E+ RR A E
Sbjct: 444 VGRVE-NIDDLALDFGCRVGSLPSTYLGLPLGALFKSVTVWDGVEERFHRR-AFNDWEAE 501
Query: 395 RLTKIWRDRRI 427
R + +R+
Sbjct: 502 RFLERLHGKRV 512
>UniRef50_A5BSI3 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1326
Score = 37.1 bits (82), Expect = 0.16
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGI----SVGGRK--ISNLRYADDTTLLASTRDEIEVL 166
LSP LF I + + R++L ++ + VG + +S+L++ADD +STR+E +
Sbjct: 972 LSPFLFTIVADVLSRMLLRAEERNVLDSFRVGRNRTRVSHLQFADDIIFFSSTREEDMLT 1031
Query: 167 LRR-LETTALDFGLAINRDKTK 229
L+ L GL +N DK +
Sbjct: 1032 LKSVLLVFGHISGLKVNLDKIR 1053
>UniRef50_Q5K671 Cluster: Reverse transcriptase; n=2; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 1114
Score = 37.1 bits (82), Expect = 0.16
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP+LFN+ + I+ + E G + +S L YADD LLA ++ ++ + ++
Sbjct: 592 LSPILFNVVMDLILASLPER--VGYRLEMEPVSALAYADDLVLLAGSKVGMQESISAVDC 649
Query: 185 TALDFGLAINRDKTKMM 235
GL +N K+ ++
Sbjct: 650 VGRQMGLRLNCRKSAVL 666
>UniRef50_UPI0000E4A879 Cluster: PREDICTED: similar to ReO_6,
partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ReO_6, partial -
Strongylocentrotus purpuratus
Length = 1267
Score = 36.7 bits (81), Expect = 0.22
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRD---EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPE 268
+S L+YADDT ++ + R E E L + L N KTK MI+D + +
Sbjct: 320 VSVLKYADDTVIVGNIRGSETEYEDYLNWFTEWCNENFLDFNTTKTKEMIIDFRKVRPVD 379
Query: 269 VQH----IAG--CEVVNSYVYLGSTITNAGGCEDEIR 361
I G E+V SY YLG+ I + +D R
Sbjct: 380 PSSCPMKINGKEIEIVKSYKYLGTVINDKLKWDDNCR 416
>UniRef50_Q1NNY7 Cluster: RNA-directed DNA polymerase; n=5;
Bacteria|Rep: RNA-directed DNA polymerase - delta
proteobacterium MLMS-1
Length = 448
Score = 36.7 bits (81), Expect = 0.22
Identities = 32/88 (36%), Positives = 42/88 (47%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL NIY + G ++ R + RYADD LA D L +E
Sbjct: 240 VVSPLLANIYLHEFDKKFNGAEGPGQTMDVRLV---RYADDWVALARRIDHR--LSDFVE 294
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQP 265
TT GL +NRDKT + N+NQP
Sbjct: 295 TTLDGLGLTLNRDKTSTV-----NLNQP 317
>UniRef50_A5B035 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 862
Score = 36.7 bits (81), Expect = 0.22
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +2
Query: 65 WDKGISVGGRKISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLAINRDKTKMMIV 241
W KG S G +++L +ADDT + +++D++ L L GL IN DK+++ +
Sbjct: 563 WIKGRSGDGAVVTHLLFADDTLVFCEASQDQMAHLSWLLMWFEAISGLRINLDKSEIFPI 622
Query: 242 DRANINQPEVQHIAGCEV---VNSY--VYLGS---TITNAGGCEDEIRRRCAV 376
R N + GC+V NSY + LG+ ++ G E RRR A+
Sbjct: 623 GRVE-NLEALALEVGCKVGRLPNSYLGIPLGANHKSVAVWDGVEKRFRRRPAL 674
>UniRef50_Q1HW07 Cluster: Reverse transcriptase; n=1; Penaeus
monodon|Rep: Reverse transcriptase - Penaeus monodon
(Penoeid shrimp)
Length = 382
Score = 36.7 bits (81), Expect = 0.22
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEI 157
+L+P LFN ++IM G ++G K+S+L +ADD +L+ + + +
Sbjct: 316 VLAPTLFNTCMDWIMGRATSQSQCGATLGNIKVSDLDFADDVAILSESLESL 367
>UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to ORF2-encoded protein - Nasonia vitripennis
Length = 1013
Score = 36.3 bits (80), Expect = 0.29
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLE-DWDKGISVGGRKISNLRYADD-TTLLASTRDEIEVLLRR 175
IL PLLF+IY + ++ KG+ +++L YADD T TRD + + R
Sbjct: 699 ILGPLLFSIYINDLQEVLAGFRGPKGLLTD--SVAHLLYADDLQTYTQVTRDNLREGVDR 756
Query: 176 LETTA---LDF----GLAINRDKTKMMIV-DRANINQPEVQHIAGCEV-VNSYVYLGSTI 328
+ A D+ L +N KTK +I N+N+ + ++ G EV +V +
Sbjct: 757 MSAAARAVSDWASHNALHLNTGKTKAIIFGSEYNVNKLQGLNLPGVEVQTGVFVPFVDAV 816
Query: 329 TNAG 340
TN G
Sbjct: 817 TNLG 820
>UniRef50_Q2BHS9 Cluster: Putative uncharacterized protein; n=1;
Neptuniibacter caesariensis|Rep: Putative
uncharacterized protein - Neptuniibacter caesariensis
Length = 528
Score = 36.3 bits (80), Expect = 0.29
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 41 IMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRD 220
+ +++ D + I R+ DD L STR E E LET D+ LA+N
Sbjct: 203 LAELIMHQCDHALITKLPLIKGHRFIDDYELSFSTRTEAEEAFHFLETCLSDYELALNPK 262
Query: 221 KTKM 232
KTK+
Sbjct: 263 KTKV 266
>UniRef50_Q1VQM5 Cluster: Prophage LambdaSa1, reverse
transcriptase/maturase family protein; n=7;
Psychroflexus torquis ATCC 700755|Rep: Prophage
LambdaSa1, reverse transcriptase/maturase family protein
- Psychroflexus torquis ATCC 700755
Length = 456
Score = 36.3 bits (80), Expect = 0.29
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL NIY +IV + KG I +RYADD L+ E+L
Sbjct: 240 VISPLLSNIYLHAFDQIV--NNPKG-KFAKANIRIVRYADDFLLMGKWYFSKEIL--DYI 294
Query: 182 TTALD-FGLAINRDKTKMMIVDRANI 256
T+ +D GL +N++KTK++ ++++
Sbjct: 295 TSIMDNMGLTLNKEKTKLLHSSKSSL 320
>UniRef50_Q1Q2Q2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 198
Score = 36.3 bits (80), Expect = 0.29
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIE-VLLRRL 178
ILSP L N+ + + +V K G RK++ +RYADD + A +R+ +E ++ +
Sbjct: 28 ILSPTLANMTLDGLEEVV-----KKSCPGRRKVNFIRYADDFIVTADSRELLENNIIPAI 82
Query: 179 ETTALDFGLAINRDKTKMMIVDR 247
++ GL ++ +KT+++ +++
Sbjct: 83 KSFLKTRGLKLSEEKTRIVRIEQ 105
>UniRef50_A5BRV9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 968
Score = 36.3 bits (80), Expect = 0.29
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG---------GRKISNLRYADDTTLLASTRDEI 157
LSP LF + E I+ + + G G GR +S+L + D S ++ +
Sbjct: 780 LSPFLFILAMEAFSSILKKALEGGFIQGFLAYGRRRVGRAVSHLLFGD------SNKEHL 833
Query: 158 EVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTI 328
EVL FGL IN DK++++ V+ + N ++ + GC+V + YLG ++
Sbjct: 834 EVLSWAFMWFKAIFGLKINMDKSELIPVEEVS-NIEDLARVLGCKVCSLPSTYLGLSL 890
>UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 555
Score = 35.9 bits (79), Expect = 0.38
Identities = 30/144 (20%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+L+P LF+I+ ++ D+++G+ + R+ ++L V + +
Sbjct: 292 VLAPTLFSIFLSAMLEEAFADFEEGVYIQSRQDADL---------------FNVAHFKAK 336
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIR 361
T + ++ + + ++VD +NQ V+ + YLGSTI+ G + E+
Sbjct: 337 TKLKYYSNQVDHREEEEILVDGTALNQ-----------VDDFTYLGSTISKDGRIDSELV 385
Query: 362 RRCAVTRSSVERL-TKIWRDRRIT 430
+R + S+ RL T++W + ++
Sbjct: 386 KRMSKASSAFGRLRTRLWNNHHVS 409
>UniRef50_Q122P2 Cluster: RNA-directed DNA polymerase; n=5;
Proteobacteria|Rep: RNA-directed DNA polymerase -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 585
Score = 35.9 bits (79), Expect = 0.38
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDK--GISVGGR-KISNLRYADDTTLLASTRDEIEVLLR 172
++SP L NI + +++ + G++ G+ K++ +RYADD + S++D +E +R
Sbjct: 236 VISPALANITLNGLETGLMQFLREKLGVNQAGKVKVNLVRYADDFVVTGSSKDFLETTVR 295
Query: 173 RLETTAL-DFGLAINRDKTKMMIVDR 247
L + GL ++ +KT+++ +D+
Sbjct: 296 PWIVEFLRERGLTLSTEKTRIVHIDQ 321
>UniRef50_Q9XE45 Cluster: Putative non-LTR retrolelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retrolelement reverse transcriptase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 732
Score = 35.9 bits (79), Expect = 0.38
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDK-GISVGGRKISNLRYADDTTLLA-STRDEIEVLLRR 175
+ P + ++ E+ I +DW +S GG K+S++ +ADD L A ++ +I V+ R
Sbjct: 170 VTEPSMSLLWNEH--SIARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRV 227
Query: 176 LETTALDFGLAINRDKTKMMIVDRAN 253
LE + G ++ +K+K+ + +
Sbjct: 228 LERFCVASGQKVSLEKSKIFFSENVS 253
>UniRef50_Q6ATG8 Cluster: Putative uncharacterized protein
OSJNBa0093E24.14; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0093E24.14 - Oryza sativa subsp. japonica (Rice)
Length = 399
Score = 35.9 bits (79), Expect = 0.38
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRDEIEVL 166
LSP+LFNI + + ++ + G VG +S L+YADD L E
Sbjct: 255 LSPILFNIIADMLAVMIQRANNAGQLVGLVHHLIDGGLSILQYADDIILFMEHDLEKACN 314
Query: 167 LRRLETTALDF-GLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNA 337
L+ L + GL IN K+++ A Q + ++ CE + V L TI A
Sbjct: 315 LKMLLNVFEELSGLKINFHKSELYCFGEAQTAQDQYTNLFQCEAILQKVNLRGTIIAA 372
>UniRef50_Q76IN3 Cluster: Reverse transcriptase; n=142; Entamoeba
histolytica|Rep: Reverse transcriptase - Entamoeba
histolytica
Length = 801
Score = 35.9 bits (79), Expect = 0.38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDK-GISVGGRK----ISNLRYADDTTLLASTRDEIEVLL 169
LSPLLF + + + + + + K I + G + ++++ Y DD ++ ++ DE+E
Sbjct: 276 LSPLLFILSIDVLSKQLDKQISKLNIKMNGEEKQVQLNHILYMDDLKIMTNSLDEMEKAH 335
Query: 170 RRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTI 328
+ + GL IN +K+ +M IN E+ + N Y YLG I
Sbjct: 336 KLTKEIFNAIGLKINLEKSGIMTNISGKIN-GELDELPRVTNDNPYKYLGIEI 387
>UniRef50_UPI0000F1FA63 Cluster: PREDICTED: similar to ReO_6; n=1;
Danio rerio|Rep: PREDICTED: similar to ReO_6 - Danio
rerio
Length = 753
Score = 35.5 bits (78), Expect = 0.50
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVD--RANINQPE 268
+++AD+TT+++ R+ E + L T + L +N +KTK +IVD + +
Sbjct: 524 IKFADNTTVISLIRNNDETAYTEEIMHLATWCTNKNLLLNTNKTKELIVDFRKGRTGSHD 583
Query: 269 VQHIAG--CEVVNSYVYLGSTIT 331
HI G E V+S+ +LG+ I+
Sbjct: 584 PIHINGMATEPVSSFKFLGTHIS 606
>UniRef50_UPI0000E4955E Cluster: PREDICTED: similar to fibropellin
Ia; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 955
Score = 35.5 bits (78), Expect = 0.50
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIE 160
LSP +F TE + + + GI++ G +++LR+ADD L++++ ++E
Sbjct: 664 LSPKIFTATTEEVFK--KSHLNGGINIDGETLNDLRFADDVALISTSTKDLE 713
>UniRef50_A1BI39 Cluster: CRISPR-associated protein Cas1; n=4;
Chlorobium/Pelodictyon group|Rep: CRISPR-associated
protein Cas1 - Chlorobium phaeobacteroides (strain DSM
266)
Length = 731
Score = 35.5 bits (78), Expect = 0.50
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
+SP L N+Y L+ +D+ + G K+ +R+ADD +L TR + E L+ E+
Sbjct: 197 ISPALANLY--------LDRFDETMEQQGFKL--VRFADDYLVLCKTRPKAEAALKLSES 246
Query: 185 TALDFGLAINRDKTKM 232
+ L ++ DKT++
Sbjct: 247 ALAELKLELHSDKTRI 262
>UniRef50_O64463 Cluster: Gene, , similar to reverse transcriptase
genes of various retrotransposons; n=1; Chlorella
vulgaris|Rep: Gene, , similar to reverse transcriptase
genes of various retrotransposons - Chlorella vulgaris
(Green alga)
Length = 191
Score = 35.5 bits (78), Expect = 0.50
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 89 GRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPE 268
G + +L YADD LLA+T ++ L+ G+ I+ DKTK ++V +++ P
Sbjct: 31 GSCVPDLGYADDFALLATTPAHLQRLIDAAAEFCEQTGMVISVDKTK-IVVFSSSLPGPF 89
Query: 269 VQHIAGCEV--VNSYVYLGSTITNAGG 343
G + V + YLG+ A G
Sbjct: 90 QWLCGGAPLHWVQQFEYLGAPFDGAQG 116
>UniRef50_A5BH34 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 35.5 bits (78), Expect = 0.50
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--ISNLRYADDTTLLASTRDE-IEVLLRR 175
L L+ N+ + ++R + +G S+G K + +L++ DDT ++TR+E ++ L
Sbjct: 511 LFTLVINVLSMMLLRTEERNSLEGFSMGRNKTRMFHLQFVDDTIFFSNTREEDLQTLKSL 570
Query: 176 LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA 283
L FGL +N +K+ ++ N+ Q + +A
Sbjct: 571 LLVFGHIFGLKVNLNKSN---INGINLEQNHLSRLA 603
>UniRef50_Q2P9X6 Cluster: Reverse transcriptase; n=2; Enterobacteria
phage P2|Rep: Reverse transcriptase - Enterobacteria
phage P2-EC30
Length = 546
Score = 35.5 bits (78), Expect = 0.50
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKM 232
+RY DD + ++++D+++++ + L DFGL +N KT++
Sbjct: 280 VRYRDDYRIFSNSKDDLDIISKCLVNVLGDFGLDLNSKKTEL 321
>UniRef50_Q7UY81 Cluster: Reverse transcriptase/maturase; n=1;
Pirellula sp.|Rep: Reverse transcriptase/maturase -
Rhodopirellula baltica
Length = 459
Score = 35.1 bits (77), Expect = 0.66
Identities = 22/78 (28%), Positives = 44/78 (56%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSPLL N+Y L + D ++ G ++ +RYADD +L ++++ E+ L ++
Sbjct: 261 VLSPLLSNLY--------LNELDHRMADLGYEM--VRYADDFVILCRSQEQAELALEEVK 310
Query: 182 TTALDFGLAINRDKTKMM 235
+ GL ++ +KT ++
Sbjct: 311 RFVCEAGLTLHPEKTHIV 328
>UniRef50_Q7XF82 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 586
Score = 35.1 bits (77), Expect = 0.66
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-----GRKISNLRYADDTTLLASTRDE----I 157
LSPLLFN+ E + +V + + G K++ L+YADDT + E +
Sbjct: 227 LSPLLFNLAAEALTLLVQRAENNSLVEGLPINENNKVTILQYADDTIFMIKDDPEQARNL 286
Query: 158 EVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
+ +L E + GL IN +K+++ + +A Q I C++
Sbjct: 287 KFILCLFEQLS---GLKINFNKSEVFCIGKAVERQSMYSEIFTCKI 329
>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
Papilionoideae|Rep: Reverse transcriptase family member
- Glycine max (Soybean)
Length = 377
Score = 35.1 bits (77), Expect = 0.66
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM--IVDRANINQPEVQ---H 277
+ADD LL +R+E+ L G ++R K++ M ++ ++ EV+ H
Sbjct: 122 FADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSNSEVKIGDH 181
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRR 367
I V + YLGS I + G E ++ R
Sbjct: 182 I--IPQVTRFKYLGSVIQDDGEIEGDVNHR 209
>UniRef50_A2U5G6 Cluster: RNA-directed DNA polymerase; n=2;
Firmicutes|Rep: RNA-directed DNA polymerase - Bacillus
coagulans 36D1
Length = 432
Score = 34.7 bits (76), Expect = 0.87
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL N+Y Y W+K G + RYADD +L E LR ++
Sbjct: 228 VISPLLSNVYLNYFDIY----WNKAFGHLGELV---RYADDFVILCKRLSHAEEALRAVK 280
Query: 182 TTALDFGLAINRDKTKMM 235
L ++ +KT+++
Sbjct: 281 WIMRKLELTLHSEKTRLV 298
>UniRef50_Q2QSD3 Cluster: Retrotransposon protein, putative,
unclassified; n=7; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1070
Score = 34.7 bits (76), Expect = 0.87
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRD-EIEV 163
LSP+LFN+ + + ++ + G G +++L+YADDT L + D I V
Sbjct: 669 LSPILFNLVADALADMLTRAKEAGHLQGLVPHLVEGGLTHLQYADDTILFMTNSDNNIAV 728
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTITNAG 340
+ L GL IN K+++++V V ++ C++ YLG +
Sbjct: 729 VKFLLFCFEEMSGLKINYPKSEVIVVGANKEESKRVANLLNCKIRELPITYLGIPVHEGR 788
Query: 341 GCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
++ A+ + +E+ W+ R ++
Sbjct: 789 LTVADL----AIVPNKMEKRLATWKCRHLS 814
>UniRef50_Q49P02 Cluster: Reverse transcriptase-like protein; n=1;
Ixodes scapularis|Rep: Reverse transcriptase-like
protein - Ixodes scapularis (Black-legged tick) (Deer
tick)
Length = 513
Score = 34.7 bits (76), Expect = 0.87
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 11 PLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTA 190
PLLFN+ + ++ + D G S ++ + +ADD + AST + ++ L L +
Sbjct: 1 PLLFNLVVDEFLQTL--DPGIGYSSDQLQLDGMAFADDLIVFASTPEGLQRRLDSLHSFV 58
Query: 191 LDFGLAINRDKT 226
GLAIN +K+
Sbjct: 59 GARGLAINAEKS 70
>UniRef50_Q64E53 Cluster: Prophage LambdaSa1 transcriptase/maturase
family protein; n=1; uncultured archaeon GZfos14B8|Rep:
Prophage LambdaSa1 transcriptase/maturase family protein
- uncultured archaeon GZfos14B8
Length = 430
Score = 34.7 bits (76), Expect = 0.87
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL NIY Y +D+ ++ G ++ +RYADD +L + +E E + ++
Sbjct: 244 VISPLLANIYLHY--------FDERMAELGFEV--VRYADDVLVLCGSEEEAEEAISHVK 293
Query: 182 TTALDFGLAINRDKTKM 232
+ L ++ KTK+
Sbjct: 294 EILEELELTLHPQKTKI 310
>UniRef50_Q1PUN9 Cluster: Strong similarity to group II
intron-encoded protein LtrA; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Strong similarity to group II
intron-encoded protein LtrA - Candidatus Kuenenia
stuttgartiensis
Length = 432
Score = 34.3 bits (75), Expect = 1.2
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAS--TRDEIEVLLRR 175
++SPLL NIY + + V + G I+ +RYADD L+A R+ ++ L R
Sbjct: 235 VISPLLANIYLHMLDKAVNRENGVFYKYG---ITIIRYADDWVLMAKRIPREALDYLNRL 291
Query: 176 LETTALDFGLAINRDKTKMM 235
L+ L++N DK+K++
Sbjct: 292 LK----KLKLSLNEDKSKIV 307
>UniRef50_Q0LFN0 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 786
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVD 244
+R+ DD T++A+ DE+ + L+T GL +N KT M ++
Sbjct: 480 VRFVDDLTIIATDPDEMRKAWQALQTWCTSCGLNLNEQKTGAMAIN 525
>UniRef50_A4NDD1 Cluster: Magnesium/nickel/cobalt transporter CorA;
n=3; Proteobacteria|Rep: Magnesium/nickel/cobalt
transporter CorA - Haemophilus influenzae PittAA
Length = 521
Score = 34.3 bits (75), Expect = 1.2
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDW-DKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
IL + + YI ++ E+ +KGIS + LRY DD + + E +L+ L
Sbjct: 229 ILMDFIAEMILGYIDILLSEELKNKGIS----EYKILRYRDDYKIFVKNHSDGENILKYL 284
Query: 179 ETTALDFGLAINRDKTK 229
+ FGL +N KTK
Sbjct: 285 SEIMMSFGLKLNSSKTK 301
>UniRef50_A5C583 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1048
Score = 34.3 bits (75), Expect = 1.2
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Frame = +2
Query: 47 RIVLEDWDKGISV-GGR----KISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLA 208
R+V+ + G S+ GGR KIS+L +ADDT +L + +D + L + L
Sbjct: 726 RVVIGGFRSGCSIRGGRRPNLKISHLFFADDTVVLCEANKDHLTHSSWILFWFEVASDLR 785
Query: 209 INRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLG---STITNAGGCEDEIRRRCAV 376
IN DK++++ V E+ GC V + YLG ++ G E+++RRR A+
Sbjct: 786 INLDKSEIIPVGMVE-EIDELTAELGCRVGLLPSQYLGLPLEALSMWDGVEEKMRRRLAL 844
>UniRef50_A3B4Y9 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 1163
Score = 34.3 bits (75), Expect = 1.2
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLE-DWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRR-- 175
LSP LF + + +++ + K V ++ L+YADDT ++ D ++LL +
Sbjct: 1061 LSPYLFILVANVLQKLIKKCGLIKHPLVAYSPVATLQYADDTLIICQD-DPAQLLLLKSL 1119
Query: 176 LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
L+ A GL+IN K+ ++ + + + + +I C++
Sbjct: 1120 LDDFAAATGLSINFSKSTLVTLHTSGEDSQAMANILQCKL 1159
>UniRef50_A6SW44 Cluster: RNA-directed DNA polymerase; n=1;
Janthinobacterium sp. Marseille|Rep: RNA-directed DNA
polymerase - Janthinobacterium sp. (strain Marseille)
(Minibacterium massiliensis)
Length = 337
Score = 33.9 bits (74), Expect = 1.5
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 41 IMRIVLEDWDKGISVGGRK--ISNLRYADDTTLLASTRDEIEVLLRRLETTALD-FGLAI 211
+ IVL DK + +K I+ RYADD T + + I +L T +D +GL +
Sbjct: 185 LSNIVLTSLDKRLDRLAKKCSITYTRYADDLTF---SGEHIHSSFSKLVTKIVDEYGLVV 241
Query: 212 NRDKTKMMIVDRANI 256
N DKT++ + + I
Sbjct: 242 NTDKTRLKVKNGTRI 256
>UniRef50_Q0DE61 Cluster: Os06g0174800 protein; n=3; Oryza
sativa|Rep: Os06g0174800 protein - Oryza sativa subsp.
japonica (Rice)
Length = 640
Score = 33.9 bits (74), Expect = 1.5
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRDEIEVL 166
LSP+LFN+ + + I+ + + G+ G +++L+YADDT L DE +
Sbjct: 534 LSPILFNLVGDALAAILDKAKEWGVLEGLVPNLVDGGLTHLQYADDTILFIKNSDENILA 593
Query: 167 LRRLETTALDF-GLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
L+ L + G+ IN K+ + ++ + + ++ C++
Sbjct: 594 LKFLLFCYEEMSGMKINYQKSDVYVIGVEDSEGLRIANMLNCKI 637
>UniRef50_A5BFR6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 677
Score = 33.9 bits (74), Expect = 1.5
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 62 DWDKGISVGGRKISNLRYADDTTLLA-STRDEIEVLLRRLETTALDFGLAINRDKTKMMI 238
D KG G KIS+L +A+DT + + D+I L L GL +N DK+++ +
Sbjct: 193 DHVKGKGGEGVKISHLLFANDTLIFCKANEDQIIFLSWLLMWFEAISGLKVNLDKSELFL 252
Query: 239 VDRANINQPEVQHIAGCEV 295
V N E+ GC+V
Sbjct: 253 VGIVE-NVEELASELGCKV 270
>UniRef50_A5B7M7 Cluster: Putative uncharacterized protein; n=4; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1727
Score = 33.9 bits (74), Expect = 1.5
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGIS----VGGRKI--SNLRYADDTTLLASTRDEIEVL 166
LSP LF + + + R++ ++ + VG +I S+L++ADDT +++R+E
Sbjct: 1306 LSPFLFTLVADVLSRMLKRAEERNMMECFRVGRNRIRVSHLQFADDTIFFSNSREE---E 1362
Query: 167 LRRLETTALDFG----LAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
L+ L++ L FG L +N +K+ + ++ + + + C+V +YLG
Sbjct: 1363 LQTLKSLLLVFGHISRLKVNLNKSSIYDINLDQAHLSRLAVMLDCKVSEWPILYLG 1418
>UniRef50_A5B3J7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 943
Score = 33.9 bits (74), Expect = 1.5
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDK----GISVGGRK--ISNLRYADDTTLLASTRDEIEVL 166
LSP LF + + + R++L ++ G VG + +S+L++A+DT + TR+E +
Sbjct: 706 LSPFLFTLVXDVLSRMLLRAEERNXLEGFXVGRNRTRVSHLQFABDTIFFSXTREEDMLT 765
Query: 167 LR 172
L+
Sbjct: 766 LK 767
>UniRef50_A5AZZ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1022
Score = 33.9 bits (74), Expect = 1.5
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDE----IEVLLR 172
LSP LF + E + ++ + +G G ++S+L + DDT + E + LL
Sbjct: 545 LSPYLFVLGMEALTSLINKGQIRGREGAGIQVSHLLFXDDTLVFCEDSXEQLAFLSWLLL 604
Query: 173 RLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
E T+ GL IN +K++++ V R N + GC+V + YLG
Sbjct: 605 WFEATS---GLRINLNKSEILPVGRVE-NAELLAVELGCKVGSLPSTYLG 650
>UniRef50_Q71EW7 Cluster: Reverse transcriptase/maturase-like
protein RtmA; n=2; Deltaproteobacteria|Rep: Reverse
transcriptase/maturase-like protein RtmA - Pelobacter
acetylenicus
Length = 273
Score = 33.5 bits (73), Expect = 2.0
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL N+Y Y +D + I RYADD ++ E E LL L
Sbjct: 57 VISPLLANLYLHYA-------FDHWMQRNHPAIPFERYADDVLCHCRSQKEAEALLEALR 109
Query: 182 TTALDFGLAINRDKTKMM 235
D L ++ KTK++
Sbjct: 110 ERLSDCRLELHPAKTKLV 127
>UniRef50_Q2R4V1 Cluster: Retrotransposon protein, putative,
unclassified; n=8; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1296
Score = 33.5 bits (73), Expect = 2.0
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTL-LASTRDEIEV 163
LSP+LFNI + + ++ D G+ G +S L+YAD+T + L + +
Sbjct: 1052 LSPILFNIVADMLALLIKRAKDNGLLNGVIPHLVDDGLSILQYADNTIIFLEHDLQQAKN 1111
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYV-YLG 319
L L GL IN K+++ +A + I GC++ + V YLG
Sbjct: 1112 LKLILSVFEKLSGLKINFHKSELFCFSQAKDCYDQYSSIFGCKLGSFPVKYLG 1164
>UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 2064
Score = 33.5 bits (73), Expect = 2.0
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 KGISVGGRK--ISNLRYADDTTLLASTR-DEIEVLLRRLETTALDFGLAINRDKTKMMIV 241
+G VG + +S+L++ADDT L A+ R +E+ L L GL +N D++ + +
Sbjct: 317 EGFRVGRNRCRVSHLQFADDTILFANLREEELHTLKSLLLVFGQISGLKVNLDQSNLFGI 376
Query: 242 DRANINQPEVQHIAGCEVVN-SYVYLG 319
+ + + + C+ N +YLG
Sbjct: 377 NLDQNHLSRLALMLDCKASNWPILYLG 403
>UniRef50_Q76IM9 Cluster: Reverse transcriptase; n=1; Ciona
intestinalis|Rep: Reverse transcriptase - Ciona
intestinalis (Transparent sea squirt)
Length = 1540
Score = 33.5 bits (73), Expect = 2.0
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVL--EDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
LS +LFN+ TE ++ + D + +GG+ L YADD ++ RD++ L
Sbjct: 971 LSGILFNLVTEVLIPGLSAGNDGYRMACLGGKLTQVLAYADDLVVVTENRDQMLRQLGVC 1030
Query: 179 ETTALDFGLAINRDK 223
E GLA N+ K
Sbjct: 1031 EEFGRWAGLAFNQRK 1045
>UniRef50_UPI00015B5DC1 Cluster: PREDICTED: similar to CG11502-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG11502-PA - Nasonia vitripennis
Length = 463
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRD----EIEVLLR 172
LS +LFN+ EY++R ++ G ++ G L YADD +L R+ +E+L++
Sbjct: 387 LSTVLFNLTLEYVVR-KMQVSQLGATLNG-TTQILGYADDLDILGDCRETVARNVEILMK 444
Query: 173 RLETTAL 193
+T++L
Sbjct: 445 AADTSSL 451
>UniRef50_UPI0000F1FBF1 Cluster: PREDICTED: similar to ReO_6; n=1;
Danio rerio|Rep: PREDICTED: similar to ReO_6 - Danio
rerio
Length = 878
Score = 33.1 bits (72), Expect = 2.7
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 107 LRYADDTTL--LASTRDEIEVL--LRRLETTALDFGLAINRDKTKMMIVD 244
+++ADDTT+ L S DE ++ L T D L +N +KTK +IVD
Sbjct: 672 IKFADDTTVIGLISNNDETTYREEIQHLATWCTDNNLLLNTNKTKELIVD 721
>UniRef50_Q9B830 Cluster: NADH dehydrogenase subunit 2; n=1;
Coryphopterus lipernes|Rep: NADH dehydrogenase subunit 2
- Coryphopterus lipernes (Peppermint goby)
Length = 176
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 438 VFLVILRSLQIFVSLSTEDLVTAQRLRISSSQPPALVIVEPRYT*LLTTSHPAICWTSGW 259
+F+ ++ + F+SL T + T L ISS + PAL ++ P L P + W
Sbjct: 32 LFIYLVMTTTAFLSLMTNNATTLNSLAISSMKTPALSVIFPIALLSLAGLPPLTGFIPKW 91
Query: 258 LML 250
L+L
Sbjct: 92 LIL 94
>UniRef50_Q0S063 Cluster: RNA-directed DNA polymerase; n=3;
Actinomycetales|Rep: RNA-directed DNA polymerase -
Rhodococcus sp. (strain RHA1)
Length = 459
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+ S LL N+Y + R WD + G + RYADD ++ +R + E L RL
Sbjct: 234 VASALLCNVYLHRLDRA----WD--VDEHGVLV---RYADDALVMCRSRRQAEAALTRLR 284
Query: 182 TTALDFGLAINRDKTKMM 235
D GL KT+++
Sbjct: 285 ELLADLGLEPKEAKTRIV 302
>UniRef50_A7LY43 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 555
Score = 33.1 bits (72), Expect = 2.7
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKIS---NL-RYADDTTLLASTRDEIEVLL 169
I+SP L N+ + + +++ E + K + + G+ S NL RYADD + R+ +E +
Sbjct: 237 IISPTLANMTLDGLQKVLAEKY-KRVRIKGKLYSPMVNLVRYADDFIITCENRETLEKEI 295
Query: 170 RRLETTAL-DFGLAINRDKT 226
+ L + + GL ++ +KT
Sbjct: 296 KPLVADFMSERGLTLSEEKT 315
>UniRef50_A6DJK4 Cluster: Reverse transcriptase/maturase; n=20;
Lentisphaera araneosa HTCC2155|Rep: Reverse
transcriptase/maturase - Lentisphaera araneosa HTCC2155
Length = 446
Score = 33.1 bits (72), Expect = 2.7
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
I+SPLL NIY L+ +D ++ G +I +RYADD ++ +++ + LR+
Sbjct: 239 IISPLLANIY--------LDLFDHKMTEAGFEI--VRYADDFLIMCKSKESAKRALRKTR 288
Query: 182 TTALDFGLAINRDKTKMM 235
GL ++ +KT+++
Sbjct: 289 RWMKANGLKLHPEKTRIV 306
>UniRef50_A5KM63 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 398
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 110 RYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM 235
RY DD ++ +++E+ LL + A ++G+ INR KT+++
Sbjct: 254 RYMDDWYIMNPSKEELLDLLDHIHQIAEEYGIHINRKKTRIV 295
>UniRef50_A4C8M3 Cluster: RNA-directed DNA polymerase; n=12;
Pseudoalteromonas tunicata D2|Rep: RNA-directed DNA
polymerase - Pseudoalteromonas tunicata D2
Length = 429
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
I+SP+L NIY Y + + E K + GR + +RYADD ++ E L
Sbjct: 214 IISPVLANIYLHYALDLWFEKKVKP-RMRGRAML-IRYADDFVCAFQYANDAERFYEVLP 271
Query: 182 TTALDFGLAINRDKTKMMIVDR 247
F L + +KT ++ R
Sbjct: 272 KRLKKFNLEVAEEKTSLLRFSR 293
>UniRef50_Q53NE2 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 838
Score = 33.1 bits (72), Expect = 2.7
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-----GRKISNLRYADDTTLLASTRDEIEVLL 169
LSPLLFN+ + ++ +V D + G K+ L+YADDT L + L
Sbjct: 609 LSPLLFNLAAKALILLVQRAEDNLLIEGLGENDNNKVVILQYADDTIFLLPDNETYAKNL 668
Query: 170 RRLETTALDF-GLAINRDKTKMMIVDRANINQPEVQHIAGCEV-VNSYVYLG 319
+ + GL IN +K+++ + A I C V V YLG
Sbjct: 669 KYILCLFEQLSGLKINFNKSEVFCIGEAADKAEVFSQIFTCSVGVLPMKYLG 720
>UniRef50_Q2R263 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1015
Score = 33.1 bits (72), Expect = 2.7
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Frame = +2
Query: 5 LSPLLFNIYTE----YIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLL 169
LSPLLFN+ E + R +G+SV K++ L+YADDT + +D +E
Sbjct: 820 LSPLLFNLAAETLTLLVQRAESSSLLEGLSVSENNKVTILKYADDTIFM--IKDNVE-QA 876
Query: 170 RRLETTALDF----GLAINRDKTKMMIVDRANINQPEVQHIAGCE 292
R L+ F GL IN +K+ + + A + I C+
Sbjct: 877 RNLKFILCLFEQLSGLKINFNKSDVYCIGEAVERENVYSEIFTCK 921
>UniRef50_A2X084 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 317
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTL-LASTRDEIEVLLRR 175
+LSPLLFNI E + + E + GI +G ++ +A D L L + +D LL
Sbjct: 224 LLSPLLFNIVLEVLAMAIREVKEITGIQIGKEEVKLSLFAYDMILYLENPKDSTRKLLEL 283
Query: 176 LETTALDFGLAINRDKT 226
+ G IN K+
Sbjct: 284 IHEFGKVAGYXINTQKS 300
>UniRef50_UPI0000F1D8AF Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 659
Score = 32.7 bits (71), Expect = 3.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LSP L NIY + + G+ + +I L YADD LL+ T ++ L+ L+
Sbjct: 309 LSPTLLNIYINELALSLERSTAPGLDLHDSQIKCLLYADDLLLLSPTEQGLQQNLQLLD 367
>UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n=2;
Bos taurus|Rep: UPI0000F31248 UniRef100 entry - Bos
Taurus
Length = 313
Score = 32.7 bits (71), Expect = 3.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMR---IVLEDWDKGISVGGRKISNLRYA 118
ILSP LFN Y EYI+R L + KG+S+G + L ++
Sbjct: 43 ILSPCLFNFYAEYIIRDDEFGLPNSKKGLSLGLGGVRELEFS 84
>UniRef50_Q6TFE1 Cluster: Putative group II intron-encoded maturase;
n=1; Caedibacter taeniospiralis|Rep: Putative group II
intron-encoded maturase - Caedibacter taeniospiralis
Length = 341
Score = 32.7 bits (71), Expect = 3.5
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP+L NI+ Y++ ED K G ++ +RYADD L +++ + R L
Sbjct: 221 ILSPMLANIFLHYVLDKWFEDTVKQHVEGFCRL--VRYADDFVCLIQYQEDARKIERALA 278
Query: 182 TTALDFGLAINRDKTK 229
L ++ +K++
Sbjct: 279 NRFNKHELQLHPEKSR 294
>UniRef50_Q0LU25 Cluster: Putative uncharacterized protein; n=1;
Caulobacter sp. K31|Rep: Putative uncharacterized
protein - Caulobacter sp. K31
Length = 558
Score = 32.7 bits (71), Expect = 3.5
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
+ P + E I+ + + +++GGR S RY DD T+ + E +L L
Sbjct: 202 VGPDTSRLIAEVIVSAIDTELRTRLNIGGRDAS--RYIDDYTISGVNGESGEEILAALRQ 259
Query: 185 TALDFGLAINRDKT 226
+A F L +N DK+
Sbjct: 260 SAALFELELNNDKS 273
>UniRef50_Q53PY1 Cluster: Retrotransposon protein, putative,
unclassified; n=4; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1319
Score = 32.7 bits (71), Expect = 3.5
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRDEIEVL 166
LSP+LFN + + ++ +G G +S L+YADDT L + ++E
Sbjct: 1079 LSPILFNFIADMLATLINRAKTQGQIDGVIPHLIDGGLSILQYADDTVLFVN--HDLE-K 1135
Query: 167 LRRLETTALDF----GLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLGSTI 328
+ +++ L F GL IN K+++ A + + GC+V N + YLG I
Sbjct: 1136 AQNMKSVLLAFEQLSGLKINFHKSELYCFGEALDYSDQYNQLFGCQVGNFPFRYLGILI 1194
>UniRef50_Q2QNX8 Cluster: Retrotransposon protein, putative,
unclassified; n=4; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 1188
Score = 32.7 bits (71), Expect = 3.5
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 98 ISNLRYADDTTL-LASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
ISNL + DDT L +T ++ V++ L A G IN++K +M + P+VQ
Sbjct: 540 ISNLLFTDDTLLFFKATSEQANVVMNVLADYAWCTGQLINQEKCSIMF---GEASPPDVQ 596
Query: 275 HIAGCEVVNSYVYLGST 325
E V S + +GST
Sbjct: 597 -----ESVRSVLQVGST 608
>UniRef50_Q0IMS1 Cluster: Os12g0550500 protein; n=11; Oryza
sativa|Rep: Os12g0550500 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1125
Score = 32.7 bits (71), Expect = 3.5
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 98 ISNLRYADDTTL-LASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
ISNL + DDT L +T ++ V++ L A G IN++K +M + P+VQ
Sbjct: 324 ISNLLFTDDTLLFFKATSEQANVVMNVLADYAWCTGQLINQEKCSIMF---GEASPPDVQ 380
Query: 275 HIAGCEVVNSYVYLGST 325
E V S + +GST
Sbjct: 381 -----ESVRSVLQVGST 392
>UniRef50_A5ALU5 Cluster: Methionine aminopeptidase; n=5;
Eukaryota|Rep: Methionine aminopeptidase - Vitis
vinifera (Grape)
Length = 723
Score = 32.7 bits (71), Expect = 3.5
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +2
Query: 89 GRKISNLRYADDTTLLAS-TRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQP 265
G +IS+L +ADDT++ + D++ L L GL +N DK+++++V R N
Sbjct: 465 GVEISHLLFADDTSIFCEPSLDQMSYLSWLLMWFEAMLGLRVNLDKSELILVGRME-NVE 523
Query: 266 EVQHIAGCE---VVNSYVYL--GSTITNAG---GCEDEIRRRCAV 376
E+ C+ +++SY+ L G+ G E+ +R+R +
Sbjct: 524 ELALEFDCKFSTLLSSYLGLPFGAHFKEVAVWDGVEERLRKRLLI 568
>UniRef50_Q76IN9 Cluster: Reverse transcriptase; n=1; Ciona
intestinalis|Rep: Reverse transcriptase - Ciona
intestinalis (Transparent sea squirt)
Length = 779
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 74 GISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDK 223
G S+GG+ I+ + +ADD L++ T+ ++ L + G+ +N +K
Sbjct: 317 GSSIGGKSINCMAFADDLVLISRTQIGLQTNLDTISYNLNQSGMTLNSEK 366
>UniRef50_Q4C1M3 Cluster: RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease; n=14;
Cyanobacteria|Rep: RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease - Crocosphaera watsonii
Length = 530
Score = 32.3 bits (70), Expect = 4.7
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +2
Query: 104 NLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM 235
++RYADD ++ +D+ + +L+ ++ GL ++ KTK++
Sbjct: 280 SIRYADDMVVILKPKDDADKILKDIQEFLAARGLKVSEKKTKLV 323
>UniRef50_Q3D424 Cluster: Cell wall surface anchor family protein;
n=62; root|Rep: Cell wall surface anchor family protein
- Streptococcus agalactiae H36B
Length = 1326
Score = 32.3 bits (70), Expect = 4.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 74 GISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKT-KMMIVDRA 250
G VGG +++ YAD+T ++ + L + E T + ++D T I+D
Sbjct: 78 GALVGGASLTSRVYADETPVVQEQSSSVPTLAEQTEVTVKTTTVQNHQDGTVSKNIIDSN 137
Query: 251 NINQPEVQHIAGCEVVNSYVYLGSTITN 334
+++ E + E V S GST+T+
Sbjct: 138 SVSMSESASTSTSESV-SMSMSGSTLTS 164
>UniRef50_Q1FNF9 Cluster: RNA-directed DNA polymerase; n=1;
Clostridium phytofermentans ISDg|Rep: RNA-directed DNA
polymerase - Clostridium phytofermentans ISDg
Length = 356
Score = 32.3 bits (70), Expect = 4.7
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSPLL N+Y L ++D+ G + +RYADD LLA + + LL T
Sbjct: 138 LSPLLANVY--------LNEFDQEFQKRG--VPFVRYADDIVLLAKSERAAKRLL-ETST 186
Query: 185 TALD--FGLAINRDKTKMMIV 241
L+ L +N+DK++++ V
Sbjct: 187 NYLEGKLKLTVNKDKSRVVSV 207
>UniRef50_A5VH22 Cluster: RNA-directed DNA polymerase; n=1;
Sphingomonas wittichii RW1|Rep: RNA-directed DNA
polymerase - Sphingomonas wittichii RW1
Length = 572
Score = 32.3 bits (70), Expect = 4.7
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLR--- 172
++SPLL NIY + + + +E+ G ++ +N Y + +A+ R EI+ +
Sbjct: 166 VISPLLANIYL-HELDLFMEEMRARFDKGVKRRANPVYVVQSQKIAALRKEIDAIRAVGA 224
Query: 173 -RLET-TALDFGLAINRDKTKMMIVDRANIN 259
E T L AINRD+ K+ VD+ + N
Sbjct: 225 DEAEVRTRLARIEAINRDRRKISSVDQMDPN 255
>UniRef50_A5KMV9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC 27756
Length = 2030
Score = 32.3 bits (70), Expect = 4.7
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Frame = +2
Query: 236 IVD-RANINQPEVQHIAGCEVVNSYVYLGSTITNA-----GGCEDEIRRRCAVTRSSVER 397
IVD +A +N+ QH AG V+SY L +TNA G ++E+ A R++++
Sbjct: 1847 IVDLKAALNEA-AQHKAGTYTVSSYKLLKDAVTNAEPLKVNGTKEEVANAAAAIRAAIKG 1905
Query: 398 LTK 406
L K
Sbjct: 1906 LDK 1908
>UniRef50_Q7XMG7 Cluster: OSJNBa0028I23.15 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0028I23.15
protein - Oryza sativa subsp. japonica (Rice)
Length = 593
Score = 32.3 bits (70), Expect = 4.7
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG------GRKISNLRYADDTTLLASTRDEIEVL 166
LSPLLFN+ + + ++ + G G +S L+YADD T+L D +
Sbjct: 90 LSPLLFNLVADMLAVLIQRTSEHGKIHGVIPHLVDDGLSILQYADD-TILFMEHDLEDAK 148
Query: 167 LRRLETTALD--FGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYV--YLG 319
+L +A + GL IN K++++ +A + E + GC+ SY YLG
Sbjct: 149 NLKLVLSAFERLSGLKINFHKSELLCFGKAIEVEREYALLFGCK-TGSYTLKYLG 202
>UniRef50_A7NY46 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 517
Score = 32.3 bits (70), Expect = 4.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEI---EVLLRRLETTALDFGLAINRDKTKMMIVDRANI 256
+K+ N+ Y DT+++A DE+ E+LL E A+ GL T ++IV +
Sbjct: 419 QKMKNIGYVPDTSMVAQNVDELTKEEILLGHSEKLAIALGLMSTHPGTCILIVKNLRV 476
>UniRef50_A5C075 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 241
Score = 32.3 bits (70), Expect = 4.7
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTR-DEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
+S+L + ++T +L T D++ L + FGL +N DK+++++V I + V
Sbjct: 80 VSHLLFVNNTLILYGTNNDQLRYLSWVFMWFEVVFGLIVNMDKSEVVLVREVEIVE-NVV 138
Query: 275 HIAGCEV 295
+ GC+V
Sbjct: 139 SVLGCKV 145
>UniRef50_Q229J7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 408
Score = 32.3 bits (70), Expect = 4.7
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 126 VSSAYLKFDI-FRPPTDIPLSQSSRTIRIIYSVYILNK 16
V S+ +K ++ F+ P +IPLS + I +IY +YI+ K
Sbjct: 258 VQSSQMKSEVQFKIPGNIPLSSKGQLIEVIYYLYIIPK 295
>UniRef50_UPI00015612B7 Cluster: PREDICTED: similar to hCG2024112;
n=2; Equus caballus|Rep: PREDICTED: similar to
hCG2024112 - Equus caballus
Length = 294
Score = 31.9 bits (69), Expect = 6.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 26 IYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTT 130
I+ +Y R+ L DW +G G +ISNLR D++T
Sbjct: 83 IHKDYKNRLFL-DWTEGSKTGSLRISNLRREDEST 116
>UniRef50_UPI0000F21E36 Cluster: PREDICTED: similar to ReO_6; n=1;
Danio rerio|Rep: PREDICTED: similar to ReO_6 - Danio
rerio
Length = 689
Score = 31.9 bits (69), Expect = 6.2
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLR----RLETTALDFGLAINRDKTKMMIVD-RANINQPEV 271
L++A D ++ D E R +L D LA+N KTK +IVD R N +
Sbjct: 501 LKFAGDIAVVGLIMDGDETTYRDEVNQLAFWCTDNNLALNPLKTKEIIVDFRRNRPDTLL 560
Query: 272 QHIAG-C-EVVNSYVYLG 319
HI G C E+V+ + YLG
Sbjct: 561 IHIHGDCVEIVSKFKYLG 578
>UniRef50_Q64IU6 Cluster: Reverse transcriptase; n=3; Kryptolebias
marmoratus|Rep: Reverse transcriptase - Rivulus
marmoratus (Mangrove rivulus) (Kryptolebias marmoratus)
Length = 122
Score = 31.9 bits (69), Expect = 6.2
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +2
Query: 5 LSPLLFNIYTEYI-MRIVLEDWDKGISVGGRKISNLRYADD--TTLLASTRDEIEVLLRR 175
LSPLLF + E + + I + KGI GG++ L YADD ++A I LL+
Sbjct: 57 LSPLLFTLAVEPLAVAIRVNPRIKGIHAGGKEHKLLMYADDILAIIIADPIVSIPALLQC 116
Query: 176 LET 184
+E+
Sbjct: 117 VES 119
>UniRef50_Q6MQ57 Cluster: Putative uncharacterized protein; n=1;
Bdellovibrio bacteriovorus|Rep: Putative uncharacterized
protein - Bdellovibrio bacteriovorus
Length = 302
Score = 31.9 bits (69), Expect = 6.2
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Frame = +2
Query: 71 KGISVGGRKISNLRYADDTT------LLASTRDEIEVLLRRLETTALDFGLAINRDKTKM 232
KG+ + KI+ L D T L A +++ + +++ G I+++ K
Sbjct: 38 KGLQLLQSKIAVLEDLSDRTETQVNQLTALLEQKVKDIQAKIQAADKQIG-KIDQNMQKS 96
Query: 233 MIVDRANINQPEVQHIAGCEVVNSYVYL-GSTITNAGGCEDEIRRRCAVTRSSVERLTKI 409
M V A I Q + H E N+ Y+ + + + G DEI R ++R +E + K+
Sbjct: 97 MEV--AKIFQDRIPHTEIIERQNTVKYVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKV 154
Query: 410 WRDR 421
RD+
Sbjct: 155 NRDQ 158
>UniRef50_Q47277 Cluster: Orf protein; n=48; cellular organisms|Rep:
Orf protein - Escherichia coli
Length = 416
Score = 31.9 bits (69), Expect = 6.2
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SPLL N++ Y+ +DK ++ K+ RYADD L + E + L
Sbjct: 195 VISPLLANLFMHYV-------FDKWLAKYYPKVPWYRYADDGILHCHSEAEATEMREVLR 247
Query: 182 TTALDFGLAINRDKTKMM 235
+ GL ++ +KT+++
Sbjct: 248 KRFSECGLEMHPEKTRVI 265
>UniRef50_Q113E5 Cluster: RNA-directed DNA polymerase; n=2;
Cyanobacteria|Rep: RNA-directed DNA polymerase -
Trichodesmium erythraeum (strain IMS101)
Length = 482
Score = 31.9 bits (69), Expect = 6.2
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 41 IMRIVLEDWDKGISVGGRKISNL--RYADDTTLLAS--TRDEIEVLLRRLETTALDFGLA 208
I I+ DK +S K+ + RYADD T +S + I + RR E+ G
Sbjct: 314 ITNIMCRRLDKRLSEMAAKLDFVYTRYADDLTFSSSGDSLRHICNVFRRTESIVSHEGFT 373
Query: 209 INRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
+NR+KT+++ R +Q EV + E N
Sbjct: 374 VNREKTRLL---RGKSSQLEVTGVVVNEFPN 401
>UniRef50_A6L278 Cluster: Putative reverse transcriptase; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative reverse
transcriptase - Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154)
Length = 551
Score = 31.9 bits (69), Expect = 6.2
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISN----LRYADDTTLLASTRDEIE-VL 166
I+SP L N+ + + + LE K V +KI +RYADD + A ++ IE V+
Sbjct: 238 IISPTLANMALDGLQDL-LEKSVKKYQVNYKKIVPKIHLVRYADDFIVTAKDKETIEQVI 296
Query: 167 LRRLETTALDFGLAINRDKTKM 232
L + + GL ++ +KTK+
Sbjct: 297 LPLVRKFLAERGLTLSEEKTKI 318
>UniRef50_A1T776 Cluster: RNA-directed DNA polymerase; n=1;
Mycobacterium vanbaalenii PYR-1|Rep: RNA-directed DNA
polymerase - Mycobacterium vanbaalenii (strain DSM 7251
/ PYR-1)
Length = 454
Score = 31.9 bits (69), Expect = 6.2
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNL-RYADDTTLLASTRDEIEVLLRRL 178
++SPLL NIY VL+ + R + L RYADD +L + + E L +
Sbjct: 241 VISPLLANIYLH-----VLDT-----ELARRNVGELVRYADDGVVLCRSAAQAEHALAAV 290
Query: 179 ETTALDFGLAINRDKTKMM 235
GL ++ DKTK++
Sbjct: 291 GEILASLGLRLHPDKTKVV 309
>UniRef50_Q8S7E0 Cluster: Putative uncharacterized protein
OSJNBa0057L21.16; n=3; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0057L21.16 - Oryza sativa
(Rice)
Length = 633
Score = 31.9 bits (69), Expect = 6.2
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 20 FNIYTEYIMRIVLEDWDKGI--SVGGRKISNLRYADDTTLLASTRDEIE 160
F + +Y +E+ D GI VGG+ +++L YAD+ L+ +RD+ E
Sbjct: 191 FKLSIDYSCSDGIEEGDDGIWNIVGGKIVASLVYADNGALVEKSRDDSE 239
>UniRef50_Q7XWB0 Cluster: OSJNBa0061A09.16 protein; n=3; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0061A09.16
protein - Oryza sativa subsp. japonica (Rice)
Length = 764
Score = 31.9 bits (69), Expect = 6.2
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKG-----ISVGGRKISNLRYADDTTL-LASTRDEIEVL 166
LSPLLF + + + +V + + +G I ++YADDT L L ++ E+ L
Sbjct: 673 LSPLLFVLGADLLQSVVNKAYSQGVLTIPIPTPDNDFPVVQYADDTLLFLTASSKELFCL 732
Query: 167 LRRLETTALDFGLAINRDKTKMM 235
L T GL IN K+ M+
Sbjct: 733 KAILNTYVDSTGLKINYSKSCMI 755
>UniRef50_Q6UUN8 Cluster: Putative polyprotein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 674
Score = 31.9 bits (69), Expect = 6.2
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 134 LASTRDEIEVLLRRLETTALDFGL---AINRDKTKMMIVDRANINQPEVQHIAGCEVVNS 304
+A+ +DE +V++RR++ T + A+ + M +A + Q E+QH G NS
Sbjct: 62 MAAKQDETQVIVRRMDQTMSSWKPQVDAVVKGLQVEMEELKAQVGQLELQHQGG---GNS 118
Query: 305 YVYLGSTITNAGGCEDEIRRR 367
LG+T ++ +DE+ R+
Sbjct: 119 SNNLGATQASSSAIKDEVERQ 139
>UniRef50_Q0IR74 Cluster: Os11g0670100 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0670100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 2121
Score = 31.9 bits (69), Expect = 6.2
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISV-GGRKISNLRYADDTTLLA-STRDEIEVLLRRL 178
LSP LF + + + R++ +++ + R + ++YADDT ++ + D++ L L
Sbjct: 1888 LSPYLFILVADVLQRLLEKNFQIRHPIYQDRPCATIQYADDTLVICRAEEDDVLALRSTL 1947
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN-SYVYLG 319
+ GL IN K+ M+ + + + + C++ + YLG
Sbjct: 1948 LQFSKATGLQINFAKSTMISLHIDRSKESSLSELLQCKLESLPMSYLG 1995
>UniRef50_Q4QDA7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 3767
Score = 31.9 bits (69), Expect = 6.2
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -2
Query: 428 LFCGLSKSLLASQLRILSRRNVFGSHLRSLQRW**WSLDIHSY*LPRIPLYVGLPVG*C* 249
L+ G + L Q R+ N+ + ++ L RW W H Y L +PL+ G G
Sbjct: 3123 LYPGFIPTPLEVQQRLAQPFNLSIAQVQQLLRWQ-WEHHQHCYTLMPVPLFTGAAAGPTE 3181
Query: 248 HDLRSSFWS 222
D FWS
Sbjct: 3182 VDFSLRFWS 3190
>UniRef50_A5HE93 Cluster: Telomerase reverse transcriptase; n=2;
cellular organisms|Rep: Telomerase reverse transcriptase
- Ciona savignyi (Pacific transparent sea squirt)
Length = 843
Score = 31.9 bits (69), Expect = 6.2
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LS LL NI+ ++ + L +GI+ LRY DD + + +D+ L+ +
Sbjct: 539 LLSSLLCNIFYGHMEQTHLFKVFEGIN--HEPCLLLRYVDDYLFITTNQDKATTFLQLMH 596
Query: 182 TTALDFGLAINRDKT 226
+ D+G IN KT
Sbjct: 597 SGFEDYGCKINPKKT 611
>UniRef50_Q64IU0 Cluster: Reverse transcriptase; n=1; Kryptolebias
marmoratus|Rep: Reverse transcriptase - Rivulus
marmoratus (Mangrove rivulus) (Kryptolebias marmoratus)
Length = 114
Score = 31.5 bits (68), Expect = 8.1
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLAS 142
LSPLLF I E + + + ++ KGI++GG L +ADD L+ S
Sbjct: 57 LSPLLFIIALEPLAQAIRQNETIKGITMGGLDNKMLIFADDVLLILS 103
>UniRef50_A6CAH4 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 1168
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 411 QIFVSLSTEDLVTAQRLRISSSQPPALVIVEPRYT*LLTTSHPAICWTSGWLMLARSTII 232
Q+ +L T +L+T + S L +VEP +L P I S W++ R +
Sbjct: 412 QLIAALGTSNLITRTLITDYLSDRTELDVVEPLQKAVLEAKQPVIVVHSLWILFRRDALT 471
Query: 231 ILVLSRLIA 205
+L++ +A
Sbjct: 472 DNLLAKALA 480
>UniRef50_Q94Z25 Cluster: Orf557; n=2; Pylaiella littoralis|Rep:
Orf557 - Pylaiella littoralis
Length = 557
Score = 31.5 bits (68), Expect = 8.1
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISN---LRYADD--TTLLASTRDEIEVL 166
+LSPLL N+ + ++ + S GRK+ +RYADD T I+
Sbjct: 239 VLSPLLCNMTLNGLENVIRDGLPSSSSTAGRKLKGRWVVRYADDFIITNPIGKSQFIDND 298
Query: 167 LRRLETTALDFGLAINRDKTKMMIVDRANIN 259
+ + D GL I+ K++++ +++ + N
Sbjct: 299 IPLINKFMADRGLEISEKKSRIIDLEKESFN 329
>UniRef50_Q4QQD3 Cluster: Gag-pol polyprotein; n=3; Schistosoma|Rep:
Gag-pol polyprotein - Schistosoma mansoni (Blood fluke)
Length = 1154
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 92 RKISNLR-YADDTTLLASTRDE----IEVLLRRLETTALDFGLAINRDKTKM 232
R + N+ Y DD + + T + +E +L+R+E +FGL IN+DK++M
Sbjct: 556 RDLDNVEVYGDDVVVYSQTETDHAKHVEAVLKRIE----EFGLRINKDKSQM 603
>UniRef50_Q25757 Cluster: CTRP; n=3; Plasmodium falciparum|Rep: CTRP
- Plasmodium falciparum
Length = 2098
Score = 31.5 bits (68), Expect = 8.1
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 95 KISNLRY-ADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEV 271
K N+RY A T+L + +E ++L L+ GL R++ K++++ A ++
Sbjct: 183 KHKNIRYDAPKVTILFTDGNENSASNKQL----LEMGLTYRRERVKLLVLGVAAAEDNKL 238
Query: 272 QHIAGCE 292
+ IAGCE
Sbjct: 239 KLIAGCE 245
>UniRef50_A7I562 Cluster: Putative uncharacterized protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Putative
uncharacterized protein - Methanoregula boonei (strain
6A8)
Length = 360
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 20 FNIYTEYIMRIVLEDWDKGI-SVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
FN+ E++ + +E+ DKG S+ KI+ ++ T L D IE+ LR+L
Sbjct: 189 FNVQKEFMKYLKIEEIDKGAQSIDIDKIAEMKKVGITDQLERRVDNIEIRLRQL 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,577,175
Number of Sequences: 1657284
Number of extensions: 8719367
Number of successful extensions: 22628
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 22102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22570
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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