Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1042
(438 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41411| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 72 2e-13
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-13
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 72 2e-13
SB_28986| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-13
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 69 1e-12
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 69 2e-12
SB_29934| Best HMM Match : Vicilin_N (HMM E-Value=1.4) 68 4e-12
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 66 2e-11
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 65 3e-11
SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43) 64 6e-11
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 8e-11
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 8e-11
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 63 8e-11
SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3) 63 1e-10
SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42) 63 1e-10
SB_25070| Best HMM Match : RVT_1 (HMM E-Value=1.4e-15) 63 1e-10
SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41) 63 1e-10
SB_3152| Best HMM Match : RVT_1 (HMM E-Value=5.4006e-42) 63 1e-10
SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3) 62 3e-10
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 62 3e-10
SB_27484| Best HMM Match : RVT_1 (HMM E-Value=0.035) 61 3e-10
SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06) 60 1e-09
SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43) 58 2e-09
SB_13612| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_36682| Best HMM Match : RVT_1 (HMM E-Value=0.0067) 55 2e-08
SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_43040| Best HMM Match : L_lactis_RepB_C (HMM E-Value=3.4) 55 3e-08
SB_41699| Best HMM Match : RVT_1 (HMM E-Value=1.90002e-41) 55 3e-08
SB_31122| Best HMM Match : RVT_1 (HMM E-Value=0.0033) 55 3e-08
SB_32967| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_57364| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_24501| Best HMM Match : RVT_1 (HMM E-Value=4.2e-37) 54 4e-08
SB_56299| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40) 54 7e-08
SB_51188| Best HMM Match : RVT_1 (HMM E-Value=4.5e-24) 53 9e-08
SB_11573| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 9e-08
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 9e-08
SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_4509| Best HMM Match : Brix (HMM E-Value=4.4) 52 2e-07
SB_31729| Best HMM Match : RVT_1 (HMM E-Value=0.023) 52 2e-07
SB_25600| Best HMM Match : RVT_1 (HMM E-Value=0.0074) 52 2e-07
SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24) 52 2e-07
SB_29550| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 52 2e-07
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 52 3e-07
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_22389| Best HMM Match : RVT_1 (HMM E-Value=1.6e-37) 52 3e-07
SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 51 4e-07
SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36) 51 4e-07
SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 51 5e-07
SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5) 51 5e-07
SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 51 5e-07
SB_7036| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 51 5e-07
SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36) 51 5e-07
SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_50090| Best HMM Match : SPC22 (HMM E-Value=2.8) 51 5e-07
SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 51 5e-07
SB_58492| Best HMM Match : DUF1196 (HMM E-Value=5) 50 8e-07
SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22) 50 8e-07
SB_55051| Best HMM Match : RVT_1 (HMM E-Value=0.014) 50 8e-07
SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_24941| Best HMM Match : DPRP (HMM E-Value=1) 50 8e-07
SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 50 8e-07
SB_29299| Best HMM Match : RVT_1 (HMM E-Value=0.00029) 49 2e-06
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_46702| Best HMM Match : LETM1 (HMM E-Value=5.5) 49 2e-06
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_3959| Best HMM Match : RVT_1 (HMM E-Value=6.4e-40) 49 2e-06
SB_10659| Best HMM Match : PAPA-1 (HMM E-Value=0.75) 48 3e-06
SB_4898| Best HMM Match : CaMBD (HMM E-Value=1.2) 48 3e-06
SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10) 48 3e-06
SB_4423| Best HMM Match : 7tm_1 (HMM E-Value=5.5e-08) 48 3e-06
SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3) 48 3e-06
SB_777| Best HMM Match : DUF1126 (HMM E-Value=5.1) 48 3e-06
SB_58494| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3) 48 3e-06
SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8) 48 3e-06
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 48 3e-06
SB_24134| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 48 3e-06
SB_8964| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_56583| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 48 4e-06
SB_52531| Best HMM Match : RVT_1 (HMM E-Value=1e-08) 48 4e-06
SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 48 4e-06
SB_23180| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 48 4e-06
SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 48 4e-06
SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 48 4e-06
SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35) 47 6e-06
SB_13854| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 6e-06
SB_18811| Best HMM Match : RVT_1 (HMM E-Value=0.075) 47 6e-06
SB_40625| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_40223| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3) 47 8e-06
SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18) 47 8e-06
SB_25362| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 47 8e-06
SB_48616| Best HMM Match : RVT_1 (HMM E-Value=2.8e-26) 46 1e-05
SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_54448| Best HMM Match : RVT_1 (HMM E-Value=0.096) 46 2e-05
SB_46891| Best HMM Match : RVT_1 (HMM E-Value=1.6e-05) 46 2e-05
SB_41718| Best HMM Match : RVT_1 (HMM E-Value=1.4e-34) 46 2e-05
SB_32337| Best HMM Match : CaMBD (HMM E-Value=5.9) 46 2e-05
SB_19821| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11) 46 2e-05
SB_6922| Best HMM Match : RVT_1 (HMM E-Value=1.4e-34) 46 2e-05
SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 46 2e-05
SB_41944| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_33535| Best HMM Match : RVT_1 (HMM E-Value=1.4013e-45) 45 2e-05
SB_14815| Best HMM Match : RVT_1 (HMM E-Value=1.4) 45 2e-05
SB_47325| Best HMM Match : RVT_1 (HMM E-Value=2.2e-31) 45 2e-05
SB_37101| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_20409| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9) 45 3e-05
SB_21953| Best HMM Match : UME (HMM E-Value=6.1) 45 3e-05
SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18) 45 3e-05
SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_56454| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007) 44 4e-05
SB_36804| Best HMM Match : tRNA_int_endo (HMM E-Value=3.9) 44 4e-05
SB_32555| Best HMM Match : RVT_1 (HMM E-Value=2e-35) 44 6e-05
SB_49758| Best HMM Match : Sod_Fe_N (HMM E-Value=8.9) 44 6e-05
SB_6390| Best HMM Match : BCL_N (HMM E-Value=8.4) 44 6e-05
SB_22221| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_21046| Best HMM Match : DUF331 (HMM E-Value=3.2) 44 7e-05
SB_51049| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_47435| Best HMM Match : RVT_1 (HMM E-Value=7.8e-23) 43 1e-04
SB_45895| Best HMM Match : RVT_1 (HMM E-Value=0.00031) 43 1e-04
SB_27722| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 43 1e-04
SB_20474| Best HMM Match : DUF1505 (HMM E-Value=5.7) 43 1e-04
SB_20480| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 42 2e-04
SB_50765| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_51648| Best HMM Match : NAC (HMM E-Value=9.6) 42 2e-04
SB_48079| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_8257| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 40 7e-04
SB_59080| Best HMM Match : RVT_1 (HMM E-Value=1.2e-35) 40 9e-04
SB_16148| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_13918| Best HMM Match : RVT_1 (HMM E-Value=5.2e-07) 40 9e-04
SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085) 40 9e-04
SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_46731| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 38 0.003
SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 38 0.003
SB_15609| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_33707| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_15673| Best HMM Match : Arc_PepC_II (HMM E-Value=1.4) 38 0.004
SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 38 0.005
SB_56447| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_28319| Best HMM Match : zf-C2H2 (HMM E-Value=0.012) 37 0.006
SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 37 0.008
SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 37 0.008
SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032) 37 0.008
SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27) 36 0.011
SB_50753| Best HMM Match : zf-C2H2 (HMM E-Value=0.012) 36 0.011
SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 36 0.011
SB_36757| Best HMM Match : RVT_1 (HMM E-Value=4.1e-28) 36 0.015
SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4) 35 0.034
SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 34 0.045
SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 34 0.045
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.045
SB_16378| Best HMM Match : DCX (HMM E-Value=0.7) 34 0.045
SB_3856| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.045
SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5) 33 0.078
SB_57557| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_52980| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_20464| Best HMM Match : RVT_1 (HMM E-Value=0.016) 33 0.10
SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034) 33 0.10
SB_42667| Best HMM Match : Ribosomal_S9 (HMM E-Value=4.6) 33 0.14
SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0) 33 0.14
SB_29603| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_48077| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_19895| Best HMM Match : PHD (HMM E-Value=3.8e-08) 33 0.14
SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36) 32 0.18
SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.18
SB_5148| Best HMM Match : RVT_1 (HMM E-Value=1.7e-27) 32 0.18
SB_270| Best HMM Match : PHD (HMM E-Value=0.0037) 32 0.18
SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38) 32 0.24
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.24
SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25) 31 0.31
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9) 31 0.31
SB_31243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_50448| Best HMM Match : RVT_1 (HMM E-Value=3.7) 31 0.42
SB_15533| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_5801| Best HMM Match : UvdE (HMM E-Value=2.2) 31 0.42
SB_2424| Best HMM Match : RVT_1 (HMM E-Value=6.2e-18) 31 0.55
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 30 0.73
SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4) 30 0.73
SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4) 30 0.73
SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99) 30 0.73
SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08) 30 0.73
SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 30 0.96
SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011) 29 1.3
SB_7362| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5) 29 1.3
SB_46440| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_58923| Best HMM Match : RVT_1 (HMM E-Value=0.022) 29 1.7
SB_15469| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 29 1.7
SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_34968| Best HMM Match : Plasmid_killer (HMM E-Value=4.3) 29 2.2
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 29 2.2
SB_47016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_36272| Best HMM Match : NinE (HMM E-Value=1.8) 29 2.2
SB_28723| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_10015| Best HMM Match : DEAD (HMM E-Value=2.2e-34) 28 2.9
SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25) 28 2.9
SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33) 28 2.9
SB_10048| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_40707| Best HMM Match : RVT_1 (HMM E-Value=0.17) 28 3.9
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34) 28 3.9
SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) 28 3.9
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 28 3.9
SB_53869| Best HMM Match : ABC_membrane (HMM E-Value=0.34) 27 5.1
SB_50566| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_40446| Best HMM Match : RVT_1 (HMM E-Value=2.2e-16) 27 5.1
SB_23604| Best HMM Match : RVT_1 (HMM E-Value=4.6e-13) 27 5.1
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 27 5.1
SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) 27 5.1
SB_15503| Best HMM Match : DUF217 (HMM E-Value=5.3) 27 5.1
SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 27 5.1
SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02) 27 5.1
SB_38763| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_16738| Best HMM Match : DUF217 (HMM E-Value=7.8) 27 6.8
SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24) 27 8.9
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_47320| Best HMM Match : Ion_trans (HMM E-Value=2.7e-34) 27 8.9
>SB_41411| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 647
Score = 72.1 bits (169), Expect = 2e-13
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + GI K+ +L +ADD LL+ST+ I+ +L+
Sbjct: 465 MSGFMFLLVMDWILRRSVGKGENGIRWKFTSKLGDLDFADDIVLLSSTKHHIQEKTAKLD 524
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDE 355
A GL IN +KTKM+ R N Q I G E+ V+ + YLG+ + GG +
Sbjct: 525 GKARQAGLKINLEKTKML---RINAKQHGNIVINGKEIEDVSEFTYLGAKVCRQGGGMKD 581
Query: 356 IRRRCAVTRSSVERLTKIWRDRRITK 433
+R R + RS RL +IW ++I +
Sbjct: 582 LRNRLSKARSVYTRLKRIWNSKKIMR 607
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 71.7 bits (168), Expect = 2e-13
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ +L +ADD LL+ T+ +++ +
Sbjct: 766 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDDLDFADDLALLSHTQQQMQEKTNIV 825
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL INR K+K+ + +N VQ A E V+++ YLGS + N GG + +I
Sbjct: 826 ADNSARLGLNINRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDNQGGKDADI 884
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
R R R++ ++ IW I+
Sbjct: 885 RTRIGKARAAFHQIKNIWGSSEIS 908
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 71.7 bits (168), Expect = 2e-13
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ +L +ADD LL+ T+ +++ +
Sbjct: 122 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDDLDFADDLALLSHTQQQMQEKTNIV 181
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL INR K+K+ + +N VQ A E V+++ YLGS + N GG + +I
Sbjct: 182 ADNSARLGLNINRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDNQGGKDADI 240
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
R R R++ ++ IW I+
Sbjct: 241 RTRIGKARAAFHQIKNIWGSSEIS 264
>SB_28986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 71.3 bits (167), Expect = 3e-13
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + GI K+ +L +ADD LL+ST+ I+ +L+
Sbjct: 349 MSGFIFLLVMDWILRRSVGKGENGIQWKFTSKLDDLDFADDIALLSSTKHHIQEKTAKLD 408
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDE 355
A GL IN +KTKM+ R N Q I G E+ V+ + YLG+ + GG +
Sbjct: 409 GEARRAGLKINLEKTKML---RINAKQYGNIVINGKEIEDVSEFTYLGAKVCREGGGMKD 465
Query: 356 IRRRCAVTRSSVERLTKIWRDRRITK 433
+R R + RS RL +IW ++I +
Sbjct: 466 LRNRLSKARSVYTRLKRIWNSKKIMR 491
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 69.3 bits (162), Expect = 1e-12
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ + +ADD L+ T+ +I+ +
Sbjct: 86 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDDFDFADDLAFLSHTQQQIQEKTNFV 145
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL INR K+KM + ++ VQ A E V+++ YLGS + GG + +I
Sbjct: 146 ADNSARLGLNINRGKSKMFKTNASSETPITVQGEA-LEEVDTFTYLGSILDKQGGTDADI 204
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
R R R+++ +L IW I+
Sbjct: 205 RTRIGKARAALHQLKNIWGSSEIS 228
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 68.9 bits (161), Expect = 2e-12
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ +L +A+D LL+ T+ +++ +
Sbjct: 194 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDDLDFANDLALLSHTQQQMQEKTNIV 253
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL INR K+K+ + +N VQ A E V+++ YLGS + GG + +I
Sbjct: 254 ADNSARLGLNINRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDKQGGTDADI 312
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
R R R++ +L IW I+
Sbjct: 313 RTRIGKARAAFHQLKNIWGSSEIS 336
>SB_29934| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
Length = 290
Score = 67.7 bits (158), Expect = 4e-12
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
K+ +L +ADD LL+ST+ + +L+ A GL IN +KTKM+ R N Q
Sbjct: 23 KLDDLDFADDIALLSSTKHHCQEKTAKLDGEARREGLKINLEKTKML---RINAKQHGNI 79
Query: 275 HIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
I G E+ V+ + YLG+ + GG ++R R + RS RL +IW ++IT
Sbjct: 80 VINGKEIEDVSEFTYLGAKVCREGGGMKDLRNRLSKARSVYTRLKRIWNSKKIT 133
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 65.7 bits (153), Expect = 2e-11
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ L +ADD LL+ T+ +++ +
Sbjct: 320 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDYLDFADDLALLSHTQQQMQEKTNIV 379
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
A GL INR K+K+ + +N VQ A E V+++ YLGS + N GG + +I
Sbjct: 380 ADNAARLGLNINRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDNQGGTDADI 438
Query: 359 RRRCAVTRSS-VERLTKI 409
R R + SS + TKI
Sbjct: 439 RTRIELWGSSEISITTKI 456
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 188 ALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRR 367
A GL INR K+K+ + +N VQ A E V+++ YLGS + N GG + +IR R
Sbjct: 12 AARLGLNINRGKSKVFKTNASNETXITVQGEA-LEEVDTFTYLGSILDNQGGTDADIRTR 70
Query: 368 CAVTRSSVERLTKIWRDRRIT 430
++ +L IW I+
Sbjct: 71 IGKALAAFHQLKNIWGSSEIS 91
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 64.9 bits (151), Expect = 3e-11
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I NL +AD
Sbjct: 325 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRNLLFAD 384
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 385 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 443
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 444 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 487
>SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43)
Length = 458
Score = 63.7 bits (148), Expect = 6e-11
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 154 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 213
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 214 DAALVAHSESELQSLLHRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 272
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 273 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 316
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 63.3 bits (147), Expect = 8e-11
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 2245 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNQARLRAKTKVRKCTIRDLLFAD 2304
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 2305 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTVTINDFTLDVVP 2363
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 2364 QFTYLGST-TSANGCLDIELGKRIGKAVTTMTKLSSRVWENKKLT 2407
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 63.3 bits (147), Expect = 8e-11
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSP LF + ++IM+ + GI +++ +L +AD LL T+ +++ +
Sbjct: 300 LLSPFLFLLAIDWIMKTSTDQKRNGIQWTLWKQLDDLDFAD-LALLFHTQQQMQEKTNIV 358
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ GL INR K+KM + +N VQ E V+++ YLGS + GG + +I
Sbjct: 359 ADNSAKLGLNINRGKSKMFKTNASNETPITVQGET-LEEVDTFTYLGSILDKQGGTDADI 417
Query: 359 RRRCAVTRSSVERLTKIWRDRRIT 430
R R R++ +L IW I+
Sbjct: 418 RTRIGKARAAFHQLKNIWGSSEIS 441
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 63.3 bits (147), Expect = 8e-11
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 43 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRQCTIRDLLFAD 102
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 103 DAALVAQSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 161
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 162 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 205
>SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 370
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 17 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 76
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 77 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 135
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 136 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 179
>SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42)
Length = 590
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 365 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 424
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 425 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTLTINDFTLDVVP 483
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 484 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 527
>SB_25070| Best HMM Match : RVT_1 (HMM E-Value=1.4e-15)
Length = 385
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 120 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 179
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 180 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 238
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 239 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 282
>SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 447 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 506
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 507 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 565
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 566 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 609
>SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41)
Length = 889
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 721 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 780
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 781 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 839
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 840 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 883
>SB_3152| Best HMM Match : RVT_1 (HMM E-Value=5.4006e-42)
Length = 717
Score = 62.9 bits (146), Expect = 1e-10
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 509 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 568
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 569 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 627
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 628 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 671
>SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I +L +ADD L+A + E++ LL R DF LAI+ KTK+M + + I +
Sbjct: 455 IRDLLFADDAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTIN 513
Query: 278 IAGCEVVNSYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+VV + YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 514 DFTLDVVPQFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 565
>SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 290
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I +L +ADD L+A + E++ LL R DF LAI+ KTK+M + + I +
Sbjct: 38 IRDLLFADDAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTIN 96
Query: 278 IAGCEVVNSYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+VV + YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 97 DFTLDVVPQFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 148
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I +L +ADD L+A + E++ LL R DF LAI+ KTK+M + + I +
Sbjct: 21 IRDLLFADDAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTIN 79
Query: 278 IAGCEVVNSYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+VV + YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 80 DFTLDVVPQFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 131
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I +L +ADD L+A + E++ LL R DF LAI+ KTK+M + + I +
Sbjct: 38 IRDLLFADDAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTIN 96
Query: 278 IAGCEVVNSYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+VV + YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 97 DFTLDVVPQFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 148
>SB_27484| Best HMM Match : RVT_1 (HMM E-Value=0.035)
Length = 322
Score = 61.3 bits (142), Expect = 3e-10
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 83 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 142
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ +TK+M + + I + +VV
Sbjct: 143 DAALVAHSESELQSLLDRFSNACADFSLAISLKETKVMHLG-SEIAPTFTINDFTLDVVP 201
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 202 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 245
>SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06)
Length = 530
Score = 59.7 bits (138), Expect = 1e-09
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 157 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 216
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL DF LAI+ KTK+M + + I + +VV
Sbjct: 217 DAALVAHSESELQSLLDCFSNACADFSLAISLKKTKVMHLG-SEIAPTLTINDFTLDVVP 275
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 276 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 319
>SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 59.7 bits (138), Expect = 1e-09
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 37 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 96
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL DF LAI+ KTK+M + + I + +VV
Sbjct: 97 DAALVAHSESELQSLLDCFSNACADFSLAISLKKTKVMHLG-SEIAPTLTINDFTLDVVP 155
Query: 302 SYVYLGSTITNAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+ YLGST T+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 156 QFTYLGST-TSANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 199
>SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43)
Length = 661
Score = 58.4 bits (135), Expect = 2e-09
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 319 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 378
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 379 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 437
Query: 302 SYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
+ YLGST T+A GC D + T + + +++W ++++T
Sbjct: 438 QFTYLGST-TSANGCLD-VXXXXVTTMTKLS--SRVWENKKLT 476
>SB_13612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 56.0 bits (129), Expect = 1e-08
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E I++ G +S + YADD +L+ + ++ L LE
Sbjct: 53 MISPTLFNFYLSDLPEKLNEKHRNDINLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 112
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
GL+IN DKTK+MI + + G E V SY YLG
Sbjct: 113 EYCKASGLSINLDKTKVMIFNNTGKTMNNYRIFYGTYKIENVKSYKYLG 161
>SB_36682| Best HMM Match : RVT_1 (HMM E-Value=0.0067)
Length = 308
Score = 55.2 bits (127), Expect = 2e-08
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 87 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRQCTIRDLLFAD 146
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 147 DAALVAQSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 205
Query: 302 SYVYLGSTITNAGGCED-EIRRR 367
+ YLGST T+A GC D E+ +R
Sbjct: 206 QFTYLGST-TSANGCLDVELGKR 227
>SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 55.2 bits (127), Expect = 2e-08
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+L+P+LFN++ ++ + D R I + +ADD L+A + ++ ++ +
Sbjct: 457 VLAPVLFNLFFTQVLLPAVRD-----QTMERLILDALFADDCALMAHQENHLQTIVDKFS 511
Query: 182 TTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEV--VNSYVYLGSTITNAGGCED 352
+ FGL I+ KT++++ +I Q I G ++ V+S+VYLGSTI+N +
Sbjct: 512 EASKLFGLTISLSKTEVLLQPAPDSIPQQPCITIDGTQLKNVDSFVYLGSTISNDNTLDK 571
Query: 353 EIRRRCAVTRSSVERL-TKIWRDRRI 427
EI R ++ +L TK+ + + I
Sbjct: 572 EIAARIQKASHALGKLRTKVLQHQDI 597
>SB_43040| Best HMM Match : L_lactis_RepB_C (HMM E-Value=3.4)
Length = 267
Score = 54.8 bits (126), Expect = 3e-08
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
K+ +L +ADD LL+ST+ I+ +L+ A GL IN +KTKM+ R N Q
Sbjct: 23 KLDDLDFADDIALLSSTKHHIQEKTAKLDGEARRAGLKINLEKTKML---RINAKQHGNI 79
Query: 275 HIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRS 385
I G E+ V+ + YLG+ + GG ++R R + R+
Sbjct: 80 VINGKEIEDVSEFTYLGAKVFREGGGMKDLRNRLSEART 118
>SB_41699| Best HMM Match : RVT_1 (HMM E-Value=1.90002e-41)
Length = 352
Score = 54.8 bits (126), Expect = 3e-08
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 210 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 269
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 270 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 328
Query: 302 SYVYLGSTITNAGGCED-EIRRR 367
+ YLGST T+A GC D E+ +R
Sbjct: 329 QFTYLGST-TSANGCLDVELGKR 350
>SB_31122| Best HMM Match : RVT_1 (HMM E-Value=0.0033)
Length = 324
Score = 54.8 bits (126), Expect = 3e-08
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 182 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 241
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVN 301
D L+A + E++ LL R DF LAI+ KTK+M + + I + +VV
Sbjct: 242 DAALVAHSESELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVP 300
Query: 302 SYVYLGSTITNAGGCED-EIRRR 367
+ YLGST T+A GC D E+ +R
Sbjct: 301 QFTYLGST-TSANGCLDVELGKR 322
>SB_32967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-H 277
L +ADD L A+T E++ + + +FGL I+ KT++M+ N +PE+ +
Sbjct: 107 LLFADDCALNANTGLEMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYIN 166
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 167 SQRLNPVEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 218
>SB_57364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-H 277
L +ADD L A+T E++ + + +FGL I+ KT++M+ N +PE+ +
Sbjct: 14 LLFADDCALNANTGLEMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYIN 73
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 74 SQRLNPVEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 125
>SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-H 277
L +ADD L A+T E++ + + +FGL I+ KT++M+ N +PE+ +
Sbjct: 48 LLFADDCALNANTGLEMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYIN 107
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 108 SQRLNPVEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 159
>SB_24501| Best HMM Match : RVT_1 (HMM E-Value=4.2e-37)
Length = 565
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-H 277
L +ADD L A+T E++ + + +FGL I+ KT++M+ N +PE+ +
Sbjct: 253 LLFADDCALNANTGLEMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYIN 312
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 313 SQRLNPVEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 364
>SB_56299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 54.0 bits (124), Expect = 5e-08
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 7 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 66
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
L+IN DKTK+MI + + G E V SY YLG
Sbjct: 67 EYCKASELSINLDKTKVMIFNNTGKTMNNYRIFYGTYKIENVKSYKYLG 115
>SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40)
Length = 414
Score = 53.6 bits (123), Expect = 7e-08
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 160 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 219
Query: 182 TTALDFGLAINRDKTKMMIVDRA--NINQPEVQH-IAGCEVVNSYVYLG 319
L+IN DKTK+MI + IN + + E V SY YLG
Sbjct: 220 EYCKASELSINLDKTKVMIFNNTGKTINNYRIFYGTYKIENVKSYKYLG 268
>SB_51188| Best HMM Match : RVT_1 (HMM E-Value=4.5e-24)
Length = 505
Score = 53.2 bits (122), Expect = 9e-08
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 119 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 177
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG---STITNAGG 343
+ + L +N KTK+MI + Q + E V SY YLG S + N
Sbjct: 178 IYSEENSLKVNTSKTKVMIFNNIGKVMNNYQFLLNREQLENVKSYKYLGLVFSAVGNFNL 237
Query: 344 CEDEIRR 364
++E+++
Sbjct: 238 AKEELKK 244
>SB_11573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 53.2 bits (122), Expect = 9e-08
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
K+ +L +ADD LL+ST+ I+ +L+ A GL IN +KTKM+ R N Q
Sbjct: 23 KLDDLDFADDKALLSSTKHHIQEKTAKLDGEARRAGLKINLEKTKML---RINAKQHGNI 79
Query: 275 HIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTR 382
I G E+ V + YLG+ + GG ++R R + R
Sbjct: 80 VINGKEIEDVIEFTYLGAKVCREGGGMKDLRNRLSKAR 117
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 53.2 bits (122), Expect = 9e-08
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 468 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 526
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG---STITNAGG 343
+ + L +N KTK+MI + Q + E V SY YLG S + N
Sbjct: 527 IYSEENSLKVNTSKTKVMIFNNIGKVMNNYQFLLNREQLENVKSYKYLGLVFSAVGNFNL 586
Query: 344 CEDEIRR 364
++E+++
Sbjct: 587 AKEELKK 593
>SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E I++ G +S + YADD +L+ + ++ L LE
Sbjct: 137 MISPTLFNFYLSDLPEKLNEKHRNDINLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 196
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
L+IN DKTK+MI + + G E V SY YLG
Sbjct: 197 KYCKASELSINLDKTKVMIFNNTGKTMNNYRIFYGTYKIENVKSYKYLG 245
>SB_4509| Best HMM Match : Brix (HMM E-Value=4.4)
Length = 288
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD + + + ++ L LE
Sbjct: 1 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVIQSKSAKSLQEYLNSLE 60
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
L+IN DKTK+MI + + G E V SY YLG
Sbjct: 61 KYCKASELSINLDKTKVMIFNNTGKTMNNYRIFYGTYKIENVKSYKYLG 109
>SB_31729| Best HMM Match : RVT_1 (HMM E-Value=0.023)
Length = 423
Score = 52.4 bits (120), Expect = 2e-07
Identities = 31/100 (31%), Positives = 51/100 (51%)
Frame = +2
Query: 131 LLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYV 310
LL+ T+ +++ + + GL INR KTK+ + +N VQ A E V+++
Sbjct: 229 LLSHTQQQMQEKANIVADNSARLGLNINRGKTKVFKTNASNETPITVQGEA-LEEVDTFT 287
Query: 311 YLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWRDRRIT 430
YLGS + GG + +IR R R++ +L IW I+
Sbjct: 288 YLGSILDKQGGTDADIRTRIGKARAAFHQLKNIWGSSEIS 327
>SB_25600| Best HMM Match : RVT_1 (HMM E-Value=0.0074)
Length = 337
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 86 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLSSLE 145
Query: 182 TTALDFGLAINRDKTKMMIVD--RANINQPEVQH-IAGCEVVNSYVYLG 319
L+IN +KTK+MI + R +N + + E V SY YLG
Sbjct: 146 EYCKASELSINLEKTKVMIFNNTRKTMNNYRIFYGTYKIENVKSYKYLG 194
>SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24)
Length = 338
Score = 52.0 bits (119), Expect = 2e-07
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIV--LEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRR 175
+LS LFN+Y + + L+ +G+ + +++L YAD+ LLA + L
Sbjct: 112 VLSTTLFNLYLHDLSDSLRELQPQREGLVINSIPVNHLLYADELVLLAKEESRLHTYLNC 171
Query: 176 LETTALDFGLAINRDKTKMMIVDRA--NINQPEVQHIA-GCEVVNSYVYLGSTITNAG 340
+E G+ +N DKTK++I + + ++N +++ E V +Y YLG T ++ G
Sbjct: 172 MEDFVQANGMKLNLDKTKVVIFNNSGRSLNNYCTKYLGQNLENVTTYKYLGLTFSSIG 229
>SB_29550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 52.0 bits (119), Expect = 2e-07
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ + +D G+S+ R + + YAD
Sbjct: 180 VLAPTLFSLYLSAMLEVAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 239
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ RL + A F L IN KT+ + V R + Q P H+
Sbjct: 240 DSALVAHDVESMQRLVDRLSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 299
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 300 LVQNKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 348
>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
Length = 906
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-H 277
L +ADD L A+ E++ + + +FGL I+ KT++M+ N +PE+ +
Sbjct: 558 LLFADDCALNANKGLEMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYIN 617
Query: 278 IAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 618 SQRLNPVEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 669
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 1485 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 1543
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG---STITNAGG 343
+ + L +N KTK+MI + Q + E V SY YLG S + N
Sbjct: 1544 IYSEENSLKVNTLKTKVMIFNNIGKVMNNYQFLLNREQLENVKSYKYLGLVFSAVGNFNL 1603
Query: 344 CEDEIRR 364
++E+++
Sbjct: 1604 AKEELKK 1610
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 51.6 bits (118), Expect = 3e-07
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 1205 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 1263
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
+ + L +N KTK+MI + Q + E V SY YLG
Sbjct: 1264 IYSEENSLKVNTSKTKVMIFNNIGKVMNNYQFLLNREQLENVKSYKYLG 1312
>SB_22389| Best HMM Match : RVT_1 (HMM E-Value=1.6e-37)
Length = 458
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 241 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 299
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG---STITNAGG 343
+ + L +N KTK+MI + Q + E V SY YLG S + N
Sbjct: 300 IYSEENSLKVNTLKTKVMIFNNIGKVMNNYQFLLNREQLENVKSYKYLGLVFSAVGNFNL 359
Query: 344 CEDEIRR 364
++E+++
Sbjct: 360 AKEELKK 366
>SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 855
Score = 51.2 bits (117), Expect = 4e-07
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 539 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 598
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ ++YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 599 IINGQKLNAVDKFIYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 652
>SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36)
Length = 1195
Score = 51.2 bits (117), Expect = 4e-07
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISV----GG----------------RKISNLRYAD 121
+L+P+LFN++ ++ + D D G+ + GG R I + +AD
Sbjct: 800 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLGGSLFDLRRLTAKTKTMERLILDALFAD 859
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEV- 295
D L+A + ++ ++ + + FGL I+ KT++++ +I Q I G ++
Sbjct: 860 DCALMAHQENHLQTIVDKFSEASKLFGLTISLSKTEVLLQPAPDSIPQQPCITIDGTQLK 919
Query: 296 -VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 920 NVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 965
>SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 455
Score = 50.8 bits (116), Expect = 5e-07
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 139 INDLLFADDCALNATSQADLQHSVDLFSSACKNFGLKINTKKTEAMHQPAPGKPYTEPNI 198
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 199 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 252
>SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5)
Length = 294
Score = 50.8 bits (116), Expect = 5e-07
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 40 INDLLFADDCALNATSQADLQHSVDLFSSACKNFGLKINTKKTEAMHQPAPGKPYTEPNI 99
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 100 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 153
>SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 50.8 bits (116), Expect = 5e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 75 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 134
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 135 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 194
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 195 LVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 243
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 50.8 bits (116), Expect = 5e-07
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLR-YADDTTLLASTRDEIEVLLRRL 178
I SP+LF + ++IMR D +GI + S+L +ADD L+S D ++ RL
Sbjct: 151 IHSPILFLVAIDWIMRQTTSDKTRGIQL--TLFSHLEDFADDLAALSSRSDHVQEKTDRL 208
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
E + G IN K + + Q +V E V + LGS I+ G + +I
Sbjct: 209 EQFSSQTGRHINTTKKNPLPITI----QGKV-----LESVEKFTSLGSLISKDNGAKKDI 259
Query: 359 RRRCAVTRSSVERLTKIWRDRR 424
R R + RL IW+ ++
Sbjct: 260 LSRLGKARGTFARLNPIWKSKQ 281
>SB_7036| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 268
Score = 50.8 bits (116), Expect = 5e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 71 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 130
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 131 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 190
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 191 LVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 239
>SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36)
Length = 1092
Score = 50.8 bits (116), Expect = 5e-07
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 776 INDLLFADDCALNATSQADLQHSVDLFSSACKNFGLKINTKKTEAMHQPAPGKPYTEPNI 835
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 836 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 889
>SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 50.8 bits (116), Expect = 5e-07
Identities = 35/137 (25%), Positives = 63/137 (45%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 53 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 112
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIR 361
L+IN DKTK+MI + + G + + ++ + ++ C E+
Sbjct: 113 EYCKASELSINLDKTKVMIFNNTGKTMNNYRIFYGTKFL-KWLLGVNRYCSSNACRAELG 171
Query: 362 RRCAVTRSSVERLTKIW 412
R T++ R K+W
Sbjct: 172 RFPLRTKAKC-RAIKLW 187
>SB_50090| Best HMM Match : SPC22 (HMM E-Value=2.8)
Length = 268
Score = 50.8 bits (116), Expect = 5e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 71 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 130
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 131 DSVLVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 190
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 191 LVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 239
>SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 1582
Score = 50.8 bits (116), Expect = 5e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 1298 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 1357
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 1358 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 1417
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 1418 LVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 1466
>SB_58492| Best HMM Match : DUF1196 (HMM E-Value=5)
Length = 283
Score = 50.0 bits (114), Expect = 8e-07
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 39 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTESNI 98
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 99 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 152
>SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)
Length = 726
Score = 50.0 bits (114), Expect = 8e-07
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YAD L + T ++ LL RL
Sbjct: 533 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADGLVLFSETSSGLQDLLNRLS 591
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG---STITNAGG 343
+ + L +N KTK+M+ + Q + E V SY YLG S + N
Sbjct: 592 IYSEENSLKVNTSKTKVMVFNNIGKVMNNYQFLLNREQLENVKSYKYLGLVFSAVGNFNL 651
Query: 344 CEDEIRR 364
++E+++
Sbjct: 652 AKEELKK 658
>SB_55051| Best HMM Match : RVT_1 (HMM E-Value=0.014)
Length = 372
Score = 50.0 bits (114), Expect = 8e-07
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 139 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 198
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 199 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 252
>SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 50.0 bits (114), Expect = 8e-07
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PE 268
+ + YADD+ L+A + ++ L+ R T A F L IN KT+ + V R + Q P
Sbjct: 40 VREMLYADDSALVAHDVESMQRLVDRFSTAAEQFSLKINIKKTECLFQPVKRQTLTQFPG 99
Query: 269 VQHIAGCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
H+ +V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 100 EIHVRNETLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 156
>SB_24941| Best HMM Match : DPRP (HMM E-Value=1)
Length = 354
Score = 50.0 bits (114), Expect = 8e-07
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PE 268
+ + YADD+ L+A + ++ L+ R T A F L IN KT+ + V R + Q P
Sbjct: 40 VREMLYADDSALVAHDVESMQRLVDRFSTAAEQFSLKINIKKTECLFQPVKRQTLTQFPG 99
Query: 269 VQHIAGCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
H+ +V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 100 EIHVRNETLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 156
>SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1395
Score = 50.0 bits (114), Expect = 8e-07
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 816 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 875
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 876 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 929
>SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 414
Score = 50.0 bits (114), Expect = 8e-07
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 98 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 157
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 158 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 211
>SB_29299| Best HMM Match : RVT_1 (HMM E-Value=0.00029)
Length = 298
Score = 48.8 bits (111), Expect = 2e-06
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRL 178
+LSPLLF I +++ E+ GI K +L +ADD LL+ L
Sbjct: 167 LLSPLLFLIVLDWMTTQAYEENKTGIQFSLMTKPEDLEFADDIVLLSQKIAHARNKFEAL 226
Query: 179 ETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEI 358
+ A GL + KTK M + + E V S+ YLGS + GG +++
Sbjct: 227 QKEAAK-GLKVKNIKTKKMRISTTKNAGAIMCKDQPLERVESFTYLGSIVNTTGGSGEDV 285
Query: 359 RRRC 370
RC
Sbjct: 286 EARC 289
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 48.8 bits (111), Expect = 2e-06
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 3030 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAMTKTMERLILDALFAD 3089
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEV- 295
D L+A + ++ ++ + + FGL I+ KT++++ +I Q I G ++
Sbjct: 3090 DCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSIPQQPCITIDGTQLK 3149
Query: 296 -VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 3150 NVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 3195
>SB_46702| Best HMM Match : LETM1 (HMM E-Value=5.5)
Length = 306
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PE 268
+ + YADD+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P
Sbjct: 40 VREMLYADDSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPG 99
Query: 269 VQHIAGCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
H+ +V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 100 EIHVRNKTLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 156
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
I++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 681 INDLLFADDCALNATSQADLQHSVDLFSSACKNFGLKINTKKTEAMHQPAPGKPYTEPNI 740
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +D++ R A+ ++ RL K +W R I
Sbjct: 741 IINGQKLNAVDKFTYLGSTLSRNVVLDDQVTNRLAIASAAFGRLRKNVWERRGI 794
>SB_3959| Best HMM Match : RVT_1 (HMM E-Value=6.4e-40)
Length = 380
Score = 48.8 bits (111), Expect = 2e-06
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 208 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 267
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEV- 295
D L+A + ++ ++ + + FGL I+ KT++++ +I Q I G ++
Sbjct: 268 DCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSIPQQPCITIDGTQLK 327
Query: 296 -VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 328 NVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 373
>SB_10659| Best HMM Match : PAPA-1 (HMM E-Value=0.75)
Length = 498
Score = 48.4 bits (110), Expect = 3e-06
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PE 268
+ + YADD+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P
Sbjct: 353 VREMLYADDSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPG 412
Query: 269 VQHIAGCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
H+ +V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 413 EIHVRNETLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 469
>SB_4898| Best HMM Match : CaMBD (HMM E-Value=1.2)
Length = 259
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPE 268
R I + +ADD L+A + ++ ++ + + FGL I+ KT++++ +I Q
Sbjct: 31 RLILDALFADDCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSIPQQP 90
Query: 269 VQHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
I G ++ V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 91 CITIDGTQLKNVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 146
>SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10)
Length = 416
Score = 48.4 bits (110), Expect = 3e-06
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 233 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 292
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 293 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 352
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRR 367
+V + +VYLGSTI++ ++EI R
Sbjct: 353 LVQTKDFVYLGSTISDNARIDNEITFR 379
>SB_4423| Best HMM Match : 7tm_1 (HMM E-Value=5.5e-08)
Length = 1167
Score = 48.4 bits (110), Expect = 3e-06
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
++SP LFN Y + + + + + R IS L YADD +++ T ++ L +L
Sbjct: 61 MISPTLFNFYLSSLSEELNTVSNCNDVELNSRPISCLLYADDLVIVSKTATGLQKYLDKL 120
Query: 179 ETTALDFGLAINRDKTKMMIVD--RANINQPEVQH-IAGCEVVNSYVYLG---STITNAG 340
+ L +N +KTK+MI + R +N ++ + ++V SY YLG ST N
Sbjct: 121 SEFCDEAKLTVNLEKTKIMIFNNSRKTMNNYLFKYRNSKVDIVKSYKYLGVHFSTFGNFS 180
Query: 341 GCEDEIRR 364
+ EI++
Sbjct: 181 LAKQEIKK 188
>SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_777| Best HMM Match : DUF1126 (HMM E-Value=5.1)
Length = 173
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_58494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 328
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8)
Length = 266
Score = 48.0 bits (109), Expect = 3e-06
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 39 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 98
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEVV 298
D L+A + ++ ++ + + FGL I+ KT+++ +I Q I G ++
Sbjct: 99 DCALMAHQENHLQTIVDKFSEASKLFGLTISLSKTEVLFQPAPDSIPQQPCITIDGTQLK 158
Query: 299 N--SYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
N S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 159 NLDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 204
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_24134| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 268
Score = 48.0 bits (109), Expect = 3e-06
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 71 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 130
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D L+A + ++ L+ R + A F L IN KT+ + V R Q P H+
Sbjct: 131 DNALVAHDVESMQRLVDRFSSAAEQFRLKINIKKTECLFQPVKRKTSTQFPGEIHVRNET 190
Query: 293 VVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 191 LVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 239
>SB_8964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_56583| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 234
Score = 47.6 bits (108), Expect = 4e-06
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIA 283
YADD+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 3 YADDSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVR 62
Query: 284 GCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
+V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 63 NETLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 114
>SB_52531| Best HMM Match : RVT_1 (HMM E-Value=1e-08)
Length = 309
Score = 47.6 bits (108), Expect = 4e-06
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 116 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 175
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQPEVQHIAGCEV 295
D L+A + ++ ++ + + FGL I+ KT++++ + QP + I G ++
Sbjct: 176 DCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSTPQQPCIT-IDGTQL 234
Query: 296 --VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 235 KNVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 281
>SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 629
Score = 47.6 bits (108), Expect = 4e-06
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 304 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 363
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQPEVQHIAGCEV 295
D L+A + ++ ++ + + FGL I+ KT++++ + QP + I G ++
Sbjct: 364 DCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSTPQQPCIT-IDGTQL 422
Query: 296 --VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 423 KNVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 469
>SB_23180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 188 ALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRR 367
A GL INR K+K+ + +N VQ A E V+++ YLGS + N GG + +IR R
Sbjct: 38 AARLGLNINRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDNQGGTDADIRTR 96
Query: 368 CAVTRSSVERLTKIWRDRRIT 430
++ +L IW I+
Sbjct: 97 IGKALAAFHQLKNIWGSSEIS 117
>SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 382
Score = 47.6 bits (108), Expect = 4e-06
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 68 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 127
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKIWR 415
I + +N+ ++YLGST++ +DE+ R A+ ++ RL ++ R
Sbjct: 128 IINGQKLNAVDKFIYLGSTLSRNVVLDDEVTNRLAIASAAFGRLQRLKR 176
>SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 356
Score = 47.6 bits (108), Expect = 4e-06
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 40 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 99
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A ++ RL K +W+ R I
Sbjct: 100 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLARASAAFGRLRKNVWKRRGI 153
>SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 869
Score = 47.6 bits (108), Expect = 4e-06
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 564 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 623
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQPEVQHIAGCEV 295
D L+A + ++ ++ + + FGL I+ KT++++ + QP + I G ++
Sbjct: 624 DCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSTPQQPCIT-IDGTQL 682
Query: 296 --VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 683 KNVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLRTKVLQHQDI 729
>SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35)
Length = 963
Score = 47.2 bits (107), Expect = 6e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPE 268
R I + +ADD L+A + ++ ++ + + FGL I+ KT++++ +I Q
Sbjct: 682 RLILDALFADDCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSIPQQP 741
Query: 269 VQHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRR 367
I G ++ V+S+VYLGSTI+N + EI R
Sbjct: 742 CITIDGTQLKNVDSFVYLGSTISNDNTLDKEIAAR 776
>SB_13854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 47.2 bits (107), Expect = 6e-06
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 29 YTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGL 205
Y +I+R + + GI K+ +L +ADD LL+ST+ I+ +L+ A GL
Sbjct: 66 YWSWILRRSVGKGENGIRWKFTSKLDDLDFADDIALLSSTKHHIQEKTAKLDGEARGAGL 125
Query: 206 AINRDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVT 379
IN +KTKM+ R N Q I G E+ V+ + YL S+ ++ RRC +T
Sbjct: 126 KINLEKTKML---RINAKQHGNTVINGKEIEDVSEFTYLQSS--------TKLYRRCVIT 174
Query: 380 RS 385
S
Sbjct: 175 DS 176
>SB_18811| Best HMM Match : RVT_1 (HMM E-Value=0.075)
Length = 203
Score = 47.2 bits (107), Expect = 6e-06
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + GI K+ +L +A+D LL+ST+ I+ +L+
Sbjct: 92 MSGFMFLLVMDWILRRSVGKGENGIRWKFTSKLDDLDFANDIALLSSTKHHIQEKTAKLD 151
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTI 328
A GL IN +KTKM+ R N Q I G E+ V+ + YLG+ +
Sbjct: 152 GEARRAGLKINLEKTKML---RINAKQHGNIVINGKEIEDVSEFTYLGAKV 199
>SB_40625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 46.8 bits (106), Expect = 8e-06
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +2
Query: 44 MRIVLEDWDKGISVGGRK---ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAIN 214
M +++ DW SVG + + +L +ADD LL+ST+ I+ RL+ A GL N
Sbjct: 51 MFLLVMDWILRRSVGKGENGILDDLDFADDIALLSSTKHHIQEKTARLDGEARRAGLKKN 110
Query: 215 RDKTKMMIVDRANINQPEVQHIAGCEV--VNSYVYLGSTITNAG 340
+KTKM+ R N Q I G E+ V+ +YLG+ + G
Sbjct: 111 LEKTKML---RINAKQHGNIVINGKEIEDVSEIIYLGAKVCREG 151
>SB_40223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 46.8 bits (106), Expect = 8e-06
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 208 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 267
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPEVQHIAGCEV- 295
D L+A + ++ ++ + + FGL I+ KT+++ +I Q I G ++
Sbjct: 268 DCALMAHQENHLQTIVDKFSEASKLFGLTISLSKTEVLFQPAPDSIPQQPCITIDGTQLK 327
Query: 296 -VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVER-LTKIWRDRRI 427
V+S+VYLGSTI+N EI R ++ + LTK+ + + I
Sbjct: 328 NVDSFVYLGSTISNDNTLYKEIAARIQKASHALGKLLTKVLQHQDI 373
>SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 46.8 bits (106), Expect = 8e-06
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Frame = +2
Query: 155 IEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITN 334
I V+L R DF LAI+ KTK+M + + I + +VV + YLGST T+
Sbjct: 4 ILVILDRFSNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-TS 61
Query: 335 AGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 ANGCLDVELGKRIGKAVTTMSKLSSRVWENKKLT 95
>SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 46.8 bits (106), Expect = 8e-06
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTIT 331
E++ LL R DF LAI+ KTK+M + + I + +VV + YLGST T
Sbjct: 4 ELQSLLDRFLNACADFSLAISLKKTKVMHLG-SEIAPTFTINDFTLDVVPQFTYLGST-T 61
Query: 332 NAGGCED-EIRRRCAVTRSSVERL-TKIWRDRRIT 430
+A GC D E+ +R +++ +L +++W ++++T
Sbjct: 62 SANGCLDVELGKRIGKAVTTMTKLSSRVWENKKLT 96
>SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18)
Length = 418
Score = 46.8 bits (106), Expect = 8e-06
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++S LFN Y + + E + I + +S + YADD +L+ + ++ L L+
Sbjct: 186 MISTTLFNFYLSDLPEKLNEKYRNDIDLNSVPLSCILYADDLVILSKSAKGLQEYLNSLK 245
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG---CEVVNSYVYLG 319
L+IN DKTK+MI + + G E V SY YLG
Sbjct: 246 EYCKASELSINLDKTKVMIFNNTGKTMNNYRIFYGTYKIENVKSYKYLG 294
>SB_25362| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 185
Score = 46.8 bits (106), Expect = 8e-06
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PE 268
+ + YADD+ L+A + ++ L+ R + A F L IN KT+ + V R + + P
Sbjct: 40 VREMLYADDSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTRFPG 99
Query: 269 VQHIAGCEVVNS--YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
H+ +V + +VYLGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 100 EIHVRNETLVQTKDFVYLGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 156
>SB_48616| Best HMM Match : RVT_1 (HMM E-Value=2.8e-26)
Length = 327
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
++SP LFN Y + + + + + R IS L YADD +++ T ++ L +L
Sbjct: 122 MISPTLFNFYLSSLSEELNTVRNCNDVELNSRPISCLLYADDLVIVSKTVTGLQKYLDKL 181
Query: 179 ETTALDFGLAINRDKTKMMIVDRA--NINQPEVQH-IAGCEVVNSYVYLG---STITNAG 340
+ L +N +KTK+MI + + +N ++ + ++V SY YLG ST N
Sbjct: 182 SEFCDEAKLTVNLEKTKIMIFNNSGKTMNNYLFKYRNSKVDIVKSYKYLGVHFSTFGNFS 241
Query: 341 GCEDEIRR 364
+ EI++
Sbjct: 242 LAKQEIKK 249
>SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 46.0 bits (104), Expect = 1e-05
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Frame = +2
Query: 8 SPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
SP LFN Y + + + + + R IS L YADD +++ T ++ L +L
Sbjct: 1050 SPTLFNFYLSSLSEELNTVRNCNDVELNSRPISCLLYADDLVIVSKTATGLQKYLDKLSE 1109
Query: 185 TALDFGLAINRDKTKMMIVDRA--NINQPEVQH-IAGCEVVNSYVYLG---STITNAGGC 346
+ L +N +KTK+MI + + +N ++ + ++V SY YLG ST N
Sbjct: 1110 FCDEAKLTVNLEKTKIMIFNNSGKTMNNYLFKYRNSKVDIVKSYKYLGVHFSTFGNFSLA 1169
Query: 347 EDEIRR 364
+ EI++
Sbjct: 1170 KQEIKK 1175
>SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A++ +++ + + +FGL IN KT+ M E
Sbjct: 40 VNDLLFADDCALNATSLADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKLYTEPNI 99
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
I + +N+ + YLGST++ +DE+ R A ++ RL K +W+ R I
Sbjct: 100 IINGQKLNAVDKFTYLGSTLSRNVVLDDEVTNRLARASAAFGRLRKNVWKRRGI 153
>SB_54448| Best HMM Match : RVT_1 (HMM E-Value=0.096)
Length = 343
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 145 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 204
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 205 T-VKGQRLQDVENFTYLGSTLSRNANTDAEINNRIAKASSAFGRLRKSVWERRGISQ 260
>SB_46891| Best HMM Match : RVT_1 (HMM E-Value=1.6e-05)
Length = 235
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 160 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNNLE 219
Query: 182 TTALDFGLAINRDKTK 229
L+IN DKTK
Sbjct: 220 EYCKASELSINLDKTK 235
>SB_41718| Best HMM Match : RVT_1 (HMM E-Value=1.4e-34)
Length = 470
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 272 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 331
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 332 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 387
>SB_32337| Best HMM Match : CaMBD (HMM E-Value=5.9)
Length = 289
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 77 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 136
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 137 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 192
>SB_19821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 207 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 266
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 267 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 322
>SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11)
Length = 959
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 702 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPXPGKPYQEPNI 761
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 762 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 817
>SB_6922| Best HMM Match : RVT_1 (HMM E-Value=1.4e-34)
Length = 425
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 213 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 272
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 273 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 328
>SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 328
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 7 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 66
Query: 272 QHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
+ G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 67 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 122
>SB_41944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 60 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 119
Query: 182 TTALDFGLAINRDKTK 229
L+IN DKTK
Sbjct: 120 EYCKASELSINLDKTK 135
>SB_33535| Best HMM Match : RVT_1 (HMM E-Value=1.4013e-45)
Length = 469
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
++SP LFN Y + + + + + R IS L YADD +++ T ++ L +L
Sbjct: 345 MISPTLFNFYLSSLSEELNTVRNCNDVELNSRPISCLLYADDLVIVSKTATGLQKYLDKL 404
Query: 179 ETTALDFGLAINRDKTKMMIVDRA--NINQPEVQH-IAGCEVVNSYVYLGSTITNAG 340
+ L +N +KTK+MI + + +N ++ + ++V SY YLG + G
Sbjct: 405 SEFCDEAKLTVNLEKTKIMIFNNSGKTMNNYLFKYRNSKVDIVKSYKYLGVHFSTFG 461
>SB_14815| Best HMM Match : RVT_1 (HMM E-Value=1.4)
Length = 331
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 17 LFNIYTEYIMRIVLEDWDKGISVGG-RKISNLRYADDTTLLASTRDEIEVLLRRLETTAL 193
LF + ++IMR + GI + +L +ADD L+++ +++ +L TA
Sbjct: 152 LFLLAIDWIMRETTSQGNPGIRWKFYTQQEDLDFADDIALISTNHSQMQKKTDKLSETAQ 211
Query: 194 DFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG 340
GL I++ KT+++ V+ N ++Q+ + N + YLG+ ++ G
Sbjct: 212 KVGLNISQSKTRVLKVNCKNPEPIKLQNGQDIKETNDFTYLGACVSTDG 260
>SB_47325| Best HMM Match : RVT_1 (HMM E-Value=2.2e-31)
Length = 300
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++SP LFN Y + + E + I + G +S + YADD +L+ + ++ L LE
Sbjct: 160 MISPTLFNFYLSDLPEKLNEKYRNDIDLNGVPLSCILYADDLVILSKSAKGLQEYLNSLE 219
Query: 182 TTALDFGLAINRDKTK 229
L+IN DKTK
Sbjct: 220 EYCKASELSINLDKTK 235
>SB_37101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 45.2 bits (102), Expect = 2e-05
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + GI K+ +L +ADD LL+ST+ I+ RL+
Sbjct: 8 MSGFMFLLVMDWILRRSVGKGENGIRWKFTSKLDDLDFADDIALLSSTKHHIQEKTARLD 67
Query: 182 TTALDFGLAINRDKTKMMIVD 244
A GL IN +KTKM+ ++
Sbjct: 68 GEARRAGLKINLEKTKMLRIN 88
>SB_20409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 45.2 bits (102), Expect = 2e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNI+T I D K++ L YADD +L+ + +E L++L+
Sbjct: 4 LSPTLFNIFTNDIPETFSSSCDPVKLDNTSKLNCLLYADDLVILSDSVTGLENCLQKLKM 63
Query: 185 TALDFGLAINRDKTKMMIVDRANI 256
+A + L +N K+K+++ A I
Sbjct: 64 SADKWKLTVNMKKSKVLVFGPATI 87
>SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)
Length = 910
Score = 44.8 bits (101), Expect = 3e-05
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN+Y + + I++ G+ +S L YADD + + + ++ L +++
Sbjct: 30 MLSPTLFNLYAHDLPEQLDTCNIDDININGKPLSCLLYADDLVIFSKSEKGLQNYLDKVQ 89
Query: 182 TTALDFGLAINRDKTKMMIVDR--ANINQ-PEVQHIAGCEVVNSYVYLGSTITNAG 340
L +N KTK++I IN P + E V SY YLG ++ G
Sbjct: 90 YFCKQTDLKVNIKKTKILIFSNNGKTINNIPFYINHVRLENVKSYKYLGLHLSAFG 145
>SB_21953| Best HMM Match : UME (HMM E-Value=6.1)
Length = 304
Score = 44.8 bits (101), Expect = 3e-05
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN+Y + + I++ G+ +S L YADD + + + ++ L +++
Sbjct: 30 MLSPTLFNLYAHDLPEQLDTCNIDDININGKPLSCLLYADDLVIFSKSEKGLQNYLDKVQ 89
Query: 182 TTALDFGLAINRDKTKMMIVDR--ANINQ-PEVQHIAGCEVVNSYVYLGSTITNAG 340
L +N KTK++I IN P + E V SY YLG ++ G
Sbjct: 90 YFCKQTDLKVNIKKTKILIFSNNGKTINNIPFYINHVRLENVKSYKYLGLHLSAFG 145
>SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18)
Length = 404
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++++R + + GI K+ +L +ADD LL+ST+ I+ RL+
Sbjct: 303 MSGFMFLLVMDWVLRRSVGKGENGIRWKFTSKLDDLDFADDIALLSSTKHHIQEKTARLD 362
Query: 182 TTALDFGLAINRDKTKMMIVD 244
A GL IN +KTKM+ ++
Sbjct: 363 GEARRAGLKINLEKTKMLRIN 383
>SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 44.8 bits (101), Expect = 3e-05
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGR---KISNLR-----------------YAD 121
+L+P+LFN++ ++ + D D G+ + R + +LR +AD
Sbjct: 265 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDLRRLTAKTKTMERLILDALFAD 324
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN-INQPEVQHIAGCEV- 295
L+A + ++ ++ + + FGL I+ KT+++ + I Q I G ++
Sbjct: 325 YCALMAHQENHLQTIVDKFSEASKLFGLTISLSKTEVLFQPAPDSIPQQPCITIDGTQLK 384
Query: 296 -VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 385 NVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLCTKVLQHQDI 430
>SB_56454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 44.4 bits (100), Expect = 4e-05
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 152 EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANIN--QPEVQ-HIAGCEVVNSYVYLGS 322
E++ + + +FGL I+ KT++M+ N +PE+ + V + YLGS
Sbjct: 273 EMQESVNKFSDACNNFGLTISTKKTEVMLQPAPNTPYMEPEIYINSQRLNPVEKFTYLGS 332
Query: 323 TITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
T++ +DE+ R A +S RL+K +W R I+
Sbjct: 333 TLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 369
>SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007)
Length = 280
Score = 44.4 bits (100), Expect = 4e-05
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP L N+Y + + I+ G+ +S L YADD + + ++ + + + R
Sbjct: 134 MLSPTLLNLYVHDLSEQLDTCSTDDINTNGKPLSCLLYADDFVIFSKSKKDSKTISTRSN 193
Query: 182 TTALDFGLAINRDKTKMMIVD---RANINQPEVQHIAGCEVVNSYVYLG 319
A GL +N KTK++I + + + P + E SY YLG
Sbjct: 194 IFASKTGLKVNIKKTKILIFNNNGKTTNDIPFYTNHVRLENFKSYKYLG 242
>SB_36804| Best HMM Match : tRNA_int_endo (HMM E-Value=3.9)
Length = 229
Score = 44.4 bits (100), Expect = 4e-05
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN-INQPE 268
R I + +AD L+A + ++ ++ + + FGL I+ KT+++ + I Q
Sbjct: 3 RLILDALFADYCALMAHQENHLQTIVDKFSEASKLFGLTISLSKTEVLFQPAPDSIPQQP 62
Query: 269 VQHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRI 427
I G ++ V+S+VYLGSTI+N + EI R ++ +L TK+ + + I
Sbjct: 63 CITIDGTQLKNVDSFVYLGSTISNDNTLDKEIAARIQKASHALGKLCTKVLQHQDI 118
>SB_32555| Best HMM Match : RVT_1 (HMM E-Value=2e-35)
Length = 895
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-NINQPE 268
R I + +ADD L+A + ++ ++ + + FGL I+ KT++++ +I Q
Sbjct: 668 RLILDALFADDCALMAHQENHLQTIVDKFSEASKLFGLKISLSKTEVLLQPAPDSIPQQP 727
Query: 269 VQHIAGCEV--VNSYVYLGSTITN 334
I G ++ V+S+VYLGSTI+N
Sbjct: 728 CITIDGTQLKNVDSFVYLGSTISN 751
>SB_49758| Best HMM Match : Sod_Fe_N (HMM E-Value=8.9)
Length = 146
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
K+ +L +ADD LL+ST+ I+ +L+ A GL IN +KTKM+ R N Q
Sbjct: 23 KLDDLDFADDIALLSSTKHHIQEKTAKLDGEARRAGLKINLEKTKML---RINAKQHGNI 79
Query: 275 HIAGCEV--VNSYVYLGST 325
I G E+ V+ + YL S+
Sbjct: 80 VINGKEIEDVSEFTYLQSS 98
>SB_6390| Best HMM Match : BCL_N (HMM E-Value=8.4)
Length = 194
Score = 44.0 bits (99), Expect = 6e-05
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEVQHI 280
L +ADD L A +++ + + +FGL I+ KT++M +P + +
Sbjct: 26 LLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNIT-V 84
Query: 281 AGCEV--VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
G + V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 85 KGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 138
>SB_22221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 43.6 bits (98), Expect = 7e-05
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LS LF + E + V ED + KGI V ++I + +ADD T+ + + LL ++
Sbjct: 151 LSAFLFILVLEAVATSVREDINIKGIKVDCKEIKTVIFADDLTIFIRDQSSYQFLLHKVA 210
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEV 271
GL +N DKT+++ + I + E+
Sbjct: 211 MFRAFSGLRVNDDKTEVLGLGPIKITKEEL 240
>SB_21046| Best HMM Match : DUF331 (HMM E-Value=3.2)
Length = 245
Score = 43.6 bits (98), Expect = 7e-05
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA--NINQPEVQHI 280
+ YADD L+A + + ++ L +L+ +D+ L + DKTK+M+ + ++N +
Sbjct: 14 IMYADDLVLIAKSAKDFQMYLDKLDKYCVDWNLTVYLDKTKIMVFNNCAKSMNNYRFNYQ 73
Query: 281 AG-CEVVNSYVYLG---STITNAGGCEDEIRR 364
+ V SY YLG S I N ++EI++
Sbjct: 74 GNLLKNVTSYKYLGIVFSAIGNFNVAKEEIKK 105
>SB_51049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 212 NRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSV 391
+R K+K+ + +N VQ A E V+++ YLGS + N GG + +IR R R++
Sbjct: 19 HRGKSKVFKTNASNETPITVQGEA-LEEVDTFTYLGSILDNQGGTDADIRTRIGKARAAF 77
Query: 392 ERLTKIWRDRRIT 430
+L IW I+
Sbjct: 78 HQLKNIWGSSEIS 90
>SB_47435| Best HMM Match : RVT_1 (HMM E-Value=7.8e-23)
Length = 364
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH 277
+++L +ADD L A+++ +++ + + +FGL IN KT+ M E
Sbjct: 260 VNDLLFADDCALNATSQADLQHSVDLFSSACNNFGLKINTKKTEAMHQPAPGKPYTEPNI 319
Query: 278 IAGCEVVNS---YVYLGSTITNAGGCEDEIRRRCAVTRSSVERL 400
I + +N+ ++YLGST++ +DE+ R A ++ RL
Sbjct: 320 IINGQKLNAVDKFIYLGSTLSRNVVLDDEVTNRLARASAAFGRL 363
>SB_45895| Best HMM Match : RVT_1 (HMM E-Value=0.00031)
Length = 313
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 239 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 297
Query: 182 TTALDFGLAINRDKTK 229
+ + L +N KTK
Sbjct: 298 IYSEENSLKVNTSKTK 313
>SB_27722| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 315
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+LSP LFN++ + + + I +G K++ L YADD L + T ++ LL RL
Sbjct: 241 MLSPTLFNLFLSDLPDTLAKSSSAHI-LGNTKLNCLLYADDLVLFSETSSGLQDLLNRLS 299
Query: 182 TTALDFGLAINRDKTK 229
+ + L +N KTK
Sbjct: 300 IYSEENSLKVNTSKTK 315
>SB_20474| Best HMM Match : DUF1505 (HMM E-Value=5.7)
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +2
Query: 77 ISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRA-- 250
+ + R IS L YADD +++ T ++ L +L + L +N +KTK+MI + +
Sbjct: 16 VELNSRPISCLLYADDLVIVSKTATGLQKYLDKLSEFCDEAKLTVNLEKTKIMIFNNSGK 75
Query: 251 NINQPEVQH-IAGCEVVNSYVYLG---STITNAGGCEDEIRR 364
+N ++ + ++V SY YLG ST N + EI++
Sbjct: 76 TMNNYLFKYRNSKVDIVKSYKYLGVHFSTFGNFSLAKQEIKK 117
>SB_20480| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 332
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 189 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 248
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCE 292
D+ L+A + ++ L+ R + A F L IN KT+ + V R + Q P H+
Sbjct: 249 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNET 308
Query: 293 VVNS--YVYLGSTITNAG 340
+V + +VYLG+ +++ G
Sbjct: 309 LVQTKDFVYLGNHMSSVG 326
>SB_50765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I++L +ADD L ++ + +FGL I+ KT++M +P
Sbjct: 94 INDLLFADDCALNPVPEADMRHSINLFSDACFNFGLTISTKKTEVMHQPAPGKLYVEPTT 153
Query: 272 QHIAGCEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
+ + V+ + YLGST++ +DE+ R A ++ RL K +W R IT
Sbjct: 154 INEQRLKSVDKFNYLGSTLSRNVVIDDEVNARLAKGSAAFGRLYKNVWNRRGIT 207
>SB_51648| Best HMM Match : NAC (HMM E-Value=9.6)
Length = 179
Score = 41.9 bits (94), Expect = 2e-04
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 59 EDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI 238
E + I + G +S + YADD L+ + ++ L LE L+IN DKTK+MI
Sbjct: 72 EKYRNDIDLNGVPLSCILYADDLVTLSKSAKGLQEYLNSLEEYCKASELSINLDKTKVMI 131
Query: 239 VDRANINQPEVQHIAG---CEVVNSYVYLG 319
+ + G E V SY YLG
Sbjct: 132 FNNTGKTMNNYRIFYGTYKTENVKSYKYLG 161
>SB_48079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + GI K+ +L +AD+ LL ST+ I+ +L+
Sbjct: 46 MSGFMFLLVMDWILRRSVGKGENGIRWKFTSKLDDLDFADNIALLCSTKHHIQEKTAKLD 105
Query: 182 TTALDFGLAINRDKTKMMIVD 244
A GL IN +KTKM+ ++
Sbjct: 106 GEARRAGLKINLEKTKMLRIN 126
>SB_8257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 TTLLASTRDEIEVLLRRLETTAL---DFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
T ++ + R + E T L GL I++ KT+++ V+ N ++Q+ +
Sbjct: 45 TKIICNDRPRNSTAINSKEGTTLLRIYLGLNISQSKTRVLKVNCKNPEPIKLQNGQDIKE 104
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK 406
N + YLG+ ++ GG + +I R + T+++ +L K
Sbjct: 105 TNDFTYLGACVSTDGGADKDIDTRISKTKAAFRKLKK 141
>SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 1443
Score = 40.3 bits (90), Expect = 7e-04
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 194 DFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNS---YVYLGSTITNAGGCEDEIRR 364
+FGL IN KT+ M E I + +N+ ++YLGST++ +DE+
Sbjct: 1159 NFGLKINTKKTEAMHQPAPGKPYTEPNIIINGQKLNAVDKFIYLGSTLSRNVVLDDEVTN 1218
Query: 365 RCAVTRSSVERLTK-IWRDRRI 427
R A+ ++ RL K +W+ R I
Sbjct: 1219 RLAIASAAFGRLRKNVWKRRGI 1240
>SB_59080| Best HMM Match : RVT_1 (HMM E-Value=1.2e-35)
Length = 318
Score = 39.9 bits (89), Expect = 9e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 213 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 272
Query: 272 QHIAG--CEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL 400
+ G + V ++ YLGST++ + EI R A S+ RL
Sbjct: 273 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRL 316
>SB_16148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 39.9 bits (89), Expect = 9e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 98 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 157
Query: 272 QHIAG--CEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL 400
+ G + V ++ YLGST++ + EI R A S+ RL
Sbjct: 158 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRL 201
>SB_13918| Best HMM Match : RVT_1 (HMM E-Value=5.2e-07)
Length = 278
Score = 39.9 bits (89), Expect = 9e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRAN--INQPEV 271
I +L +ADD L A +++ + + +FGL I+ KT++M +P +
Sbjct: 173 IRDLLFADDCALNAVNEHDMQQEMDAFSSACDNFGLTISIKKTEVMYQPAPGKPYQEPNI 232
Query: 272 QHIAG--CEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERL 400
+ G + V ++ YLGST++ + EI R A S+ RL
Sbjct: 233 T-VKGQRLQDVENFTYLGSTLSRNANIDAEINNRIAKASSAFGRL 276
>SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085)
Length = 576
Score = 39.9 bits (89), Expect = 9e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +2
Query: 173 RLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNS---YVYLGSTITNAGG 343
++ + +FGL IN KT+ M E I + +N+ + YLGST++
Sbjct: 296 KMMSACKNFGLKINTKKTEAMHQPAPGKPYTEPNIIINGQKLNAVDKFTYLGSTLSRNVV 355
Query: 344 CEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
+DE+ R A+ ++ RL K IW+ R I
Sbjct: 356 LDDEVTNRLAIASAAFGRLRKNIWKRRGI 384
>SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = +2
Query: 98 ISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM--IVDRANINQPEV 271
+ ++ +ADD L AS+ E++ + FGL I+ KT++M + ++P +
Sbjct: 1282 VHDMLFADDCALNASSEHEMQHSMDHFSFACDAFGLTISIKKTEVMYQLAPHKAYSEPTI 1341
Query: 272 QHIAG--CEVVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK 406
+ G + V+++ +LGST++ + + E+ R A ++ RL K
Sbjct: 1342 T-VKGEKLKAVDTFTFLGSTLSRSVRIDAEVDGRIAKASTAFGRLRK 1387
>SB_46731| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
Length = 519
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVG-GRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+S +F + ++I+R + + + GI K+ +L +ADD LL+ T+ I+ RL+
Sbjct: 425 MSGFMFLLVMDWILRWSVGNGENGIRWKFTSKLDDLDFADDIALLSLTKRHIQEKTARLD 484
Query: 182 TTALDFGLAINRDKTKMMIVD 244
A IN +KTKM+ ++
Sbjct: 485 GEARRAEFKINLEKTKMLRIN 505
>SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 519
Score = 38.3 bits (85), Expect = 0.003
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP LFNI+ E + + ++ L YADD L +++ ++ L L+
Sbjct: 333 ILSPTLFNIFLHDFALSQNEVTIDATRINDKPLNCLLYADDLVLFSTSEKGLQRKLDILD 392
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEV-QHIAG--CEVVNSYVYLGSTITNAG 340
+ + L I+ +KTK++I ++ + G E+V YLG T++ G
Sbjct: 393 SFCRENDLEISTEKTKLIIFNKNGKKLSRYGLTVKGQSIEIVTVNKYLGLTLSANG 448
>SB_15609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYI-MRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LSP LF + E + + I +D +G +G I YADD T+ L+ LE
Sbjct: 14 LSPYLFILALEILAINIRHKDDIRGFDIGDEHIKCTLYADDMTVFVKDVASYNSLMNLLE 73
Query: 182 TTALDFGLAINRDKTKMM 235
++ GL +N+DK + +
Sbjct: 74 QFSVCSGLKVNKDKLEAL 91
>SB_33707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
++S LFN Y + + E + I + +S + YADD +L+ + ++ L L+
Sbjct: 186 MISTTLFNFYLSDLPEKLNEKYRNDIDLNSVPLSCILYADDLVILSKSAKGLQEYLNSLK 245
Query: 182 TTALDFGLAINRDKTK 229
L+IN DKTK
Sbjct: 246 EYCKASELSINLDKTK 261
>SB_15673| Best HMM Match : Arc_PepC_II (HMM E-Value=1.4)
Length = 342
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYI-MRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LSP LF + E + + I +D +G +G I YADD T+ L+ LE
Sbjct: 14 LSPYLFILTFEILAINIRHKDDIRGFDIGDEHIKCTLYADDMTVFVKDVASYNSLMNLLE 73
Query: 182 TTALDFGLAINRDKTKMM 235
++ GL +N+DK + +
Sbjct: 74 QFSVCSGLKVNKDKLEAL 91
>SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 37.5 bits (83), Expect = 0.005
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
ILSP LFNI+ E + + ++ L YADD L +++ ++ L L
Sbjct: 364 ILSPTLFNIFLHDFALSQNEVTTDATRINDKPLNCLLYADDLVLFSTSEKGLQRKLDILN 423
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEV-QHIAG--CEVVNSYVYLGSTITNAG 340
+ L I+ +KTK++I ++ + G E+V YLG T++ G
Sbjct: 424 CFCRENDLEISTEKTKLIIFNKNGKKLSRYGLTVKGQSIEIVTVNKYLGLTLSANG 479
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP +FN ++ + + D G+ GG ++ L YADD LLA TR + ++ E
Sbjct: 1350 LSPFIFNAVIDWALAEL--DPLIGVKFGGIMVNALAYADDVVLLAETRAGLSKIVSAFER 1407
Query: 185 TALDFGLAIN 214
GL I+
Sbjct: 1408 NLALGGLTIS 1417
>SB_56447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNI+ I I D K++ L YADD +L+ + +E L++L+
Sbjct: 7 LSPTLFNIFINDIPEIFSSSCDPVKLDNTSKLNCLLYADDLVILSDSATGLENCLKKLKM 66
Query: 185 TALDFGLAIN 214
A + L +N
Sbjct: 67 YADKWKLTVN 76
>SB_28319| Best HMM Match : zf-C2H2 (HMM E-Value=0.012)
Length = 179
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNI+ I I D K++ YAD +L+ + +E L +L+
Sbjct: 31 LSPTLFNIFINDIPEIFSSSCDPVKLDNTSKLNCFLYADYLVILSDSATGLENCLHKLKM 90
Query: 185 TALDFGLAINRDKTKMMI 238
A + L +N K+K+++
Sbjct: 91 YADKWKLTVNMKKSKVLV 108
>SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 303
Score = 36.7 bits (81), Expect = 0.008
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 194 DFGLAINRDKTKMMIVDRAN--INQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDEIR 361
+FGL I+ KT++M +P + + G + V ++ YLGST++ + EI
Sbjct: 14 NFGLTISIKKTEVMYQPAPGKPYQEPNIT-VKGQRLQDVENFTYLGSTLSRNANIDAEIN 72
Query: 362 RRCAVTRSSVERLTK-IWRDRRITK 433
R A S+ RL K +W R I++
Sbjct: 73 NRIAKASSAFGRLRKSVWERRGISQ 97
>SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 299
Score = 36.7 bits (81), Expect = 0.008
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 194 DFGLAINRDKTKMMIVDRAN--INQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDEIR 361
+FGL I+ KT++M +P + + G + V ++ YLGST++ + EI
Sbjct: 10 NFGLTISIKKTEVMYQPAPGKPYQEPNIT-VKGQRLQDVENFTYLGSTLSRNANIDAEIN 68
Query: 362 RRCAVTRSSVERLTK-IWRDRRITK 433
R A S+ RL K +W R I++
Sbjct: 69 NRIAKASSAFGRLRKSVWERRGISQ 93
>SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032)
Length = 426
Score = 36.7 bits (81), Expect = 0.008
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+L+P LF++Y ++ I +D G+S+ R ++L + + R +V++R +
Sbjct: 139 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADL---FNVAHFKAKRKTCQVIVREM- 194
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQ-PEVQHIAGCEVVNS--YVYLGSTITNAGGCED 352
A D L + + K R + Q P H+ +V + +VYLGSTI++ ++
Sbjct: 195 LYADDSALVAHDVEMK-----RQTLTQFPGEIHVRNETLVQTKDFVYLGSTISDNARIDN 249
Query: 353 EIRRRCAVTRSSVERL-TKIWRDRRIT 430
EI R ++ +L ++W + ++
Sbjct: 250 EITFRKGKASAAYAKLRERLWDNHHVS 276
>SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27)
Length = 611
Score = 36.3 bits (80), Expect = 0.011
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG-- 286
YADD +L+ + ++ L E GL+IN +KTK+MI + + G
Sbjct: 5 YADDLVILSKSAKGLQEYLNSPEEYCKASGLSINLNKTKVMIFNNTGKTMNNYRIFYGTY 64
Query: 287 -CEVVNSYVYLG 319
E V SY YLG
Sbjct: 65 KIENVKSYKYLG 76
>SB_50753| Best HMM Match : zf-C2H2 (HMM E-Value=0.012)
Length = 401
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 197 FGLAINRDKTKMMIVDRAN-INQPEVQHIAGCEV--VNSYVYLGSTITNAGGCEDEIRRR 367
FGL I+ KT++++ + I Q I G ++ V+S+VYLGSTI+N + EI R
Sbjct: 121 FGLTISLSKTEVLLQPAPDSIPQQPCITIDGTQLKDVDSFVYLGSTISNDNTLDKEIAAR 180
Query: 368 CAVTRSSVERL-TKIWRDRRI 427
++ +L TK+ + + I
Sbjct: 181 IQKASHALGKLRTKVLQHQDI 201
>SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 255
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = +2
Query: 149 DEIEVLLRRLETTALDFGLAINRDKTKMMI--VDRANINQ-PEVQHIAGCEVVNS--YVY 313
+ ++ L+ R + A F L IN KT+ + V R + Q P H+ +V + +VY
Sbjct: 6 ESMQRLVDRFSSAAEQFSLKINIKKTECLFQPVKRQTLTQFPGEIHVRNETLVQTKDFVY 65
Query: 314 LGSTITNAGGCEDEIRRRCAVTRSSVERL-TKIWRDRRIT 430
LGSTI++ ++EI R ++ +L ++W + ++
Sbjct: 66 LGSTISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVS 105
>SB_36757| Best HMM Match : RVT_1 (HMM E-Value=4.1e-28)
Length = 381
Score = 35.9 bits (79), Expect = 0.015
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LFNI+ ++R D+GI + R I +L +AD
Sbjct: 280 VLAPTLFNIFFSVLLRHAFGSADEGILLRTRSDGKLFNPARLRAKTKVRKCTIRDLLFAD 339
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAIN 214
D L+A + E++ LL R DF LAI+
Sbjct: 340 DAALVAHSESELQSLLDRFSNACADFSLAIS 370
>SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
V+ ++YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 25 VDKFIYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 69
>SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4)
Length = 205
Score = 34.7 bits (76), Expect = 0.034
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +2
Query: 119 DDTTLLASTRD---EIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGC 289
DD LL+ST+D + + +L+ A GL IN +KTKM+ R N Q I G
Sbjct: 26 DDIALLSSTKDREKKTKEKTAKLDGEARRAGLKINLEKTKML---RINAKQHGNIVINGK 82
Query: 290 EV--VNSYVYLGSTITNAGG 343
E+ V+ + YLG+ + G
Sbjct: 83 EIEDVSEFTYLGAKVCREVG 102
>SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 34.3 bits (75), Expect = 0.045
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
V+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 25 VDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 69
>SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 34.3 bits (75), Expect = 0.045
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
V+ + YLGST++ +DE+ R A+ ++ RL K +W+ R I
Sbjct: 25 VDKFTYLGSTLSRNVVLDDEVTNRLAIASAAFGRLRKNVWKRRGI 69
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 34.3 bits (75), Expect = 0.045
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLED---WDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLR 172
IL PLL+ YT I +I+ + +S + D L+A T+ +E +
Sbjct: 770 ILGPLLYLAYTSPIAQIIARHGILYHLYADDSQLYVSFRGNSQDELLMAKTK--VECCVH 827
Query: 173 RLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG 340
+ + GL +N DK+++++ P ++H+ +VVN + S N G
Sbjct: 828 EINAWMVHNGLKLNHDKSELILFSSKFCPAPYLEHV---KVVNEIIKPASAACNLG 880
>SB_16378| Best HMM Match : DCX (HMM E-Value=0.7)
Length = 754
Score = 34.3 bits (75), Expect = 0.045
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRIT 430
V + YLGST++ +DE+ R A +S RL+K +W R I+
Sbjct: 138 VEKFTYLGSTLSRVIHIDDEVNARIAKASASFGRLSKTVWNRRGIS 183
>SB_3856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 34.3 bits (75), Expect = 0.045
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRK--------------------ISNLRYAD 121
+L+P LF++Y ++ I +D G+S+ R + + YAD
Sbjct: 178 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADLFNVAHFKAKRKTCQVIVREMLYAD 237
Query: 122 DTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMM 235
D+ L+A + ++ L+ R + A F L IN KT+ +
Sbjct: 238 DSALVAHDVESMQRLVDRFSSAAEQFSLKINIKKTECL 275
>SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5)
Length = 208
Score = 33.5 bits (73), Expect = 0.078
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRITK 433
V ++ YLGST++ + EI R A S+ RL K +W R I++
Sbjct: 25 VENFTYLGSTLSRNANIDAEINNRIAKASSAFGRLRKSVWERRGISQ 71
>SB_57557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 33.1 bits (72), Expect = 0.10
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTL---------LASTRDE 154
+L P+L+ IYT + G + I YADDT + + S R +
Sbjct: 35 VLGPILYLIYTTPL----------GAILRRHGIGYHMYADDTQIYLSFKSAGEVTSERTK 84
Query: 155 IEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQH--IAGCEVVNS 304
+E L +++ L L +N DKT+++++ + QP + +AG V S
Sbjct: 85 MEAFLNDIDSWILANNLKLNNDKTELLVIHSKHRPQPSLHEVSVAGTSVTTS 136
>SB_52980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 33.1 bits (72), Expect = 0.10
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 11 PLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETT 187
P LF + E + +V + KG+ +G +I +ADDTTL + +E LL L
Sbjct: 430 PYLFILVLEVLAIMVRSSPEVKGLKIGKSEIKMTMFADDTTLFLKDMNSLEKLLELLRIF 489
Query: 188 ALDFGLAINRDKTK 229
L N K++
Sbjct: 490 QSYSSLKTNLTKSE 503
>SB_20464| Best HMM Match : RVT_1 (HMM E-Value=0.016)
Length = 357
Score = 33.1 bits (72), Expect = 0.10
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVL 166
+SP LF + E + +V + KG+ +G +I +ADDTTL + +E++
Sbjct: 297 VSPYLFILVLEVLAIMVRSSPEVKGLKIGKSEIKMTMFADDTTLFLKDMNSLEIV 351
>SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034)
Length = 272
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 VNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTK-IWRDRRI 427
V+ ++YLGST++ +DE+ R A ++ RL K +W+ R I
Sbjct: 25 VDKFIYLGSTLSRNVVLDDEVTNRLARASAAFGRLRKNVWKRRGI 69
>SB_42667| Best HMM Match : Ribosomal_S9 (HMM E-Value=4.6)
Length = 179
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 28 EVVDSFCYLGDTICAGGGCEAAIITR 53
>SB_35162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 77 ISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI 238
I++ G+ +S L YADD + + + ++ L +++ L +N KTK++I
Sbjct: 78 ININGKPLSCLLYADDLVIFSKSEKGLQNYLDKVQHFCKQTDLKVNIKKTKILI 131
>SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0)
Length = 1025
Score = 32.7 bits (71), Expect = 0.14
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
LS ++F + E ++ + D + KGI+V +I YADD T+ E L
Sbjct: 476 LSGIIFAVAIELLVCAIQHDPNIKGINVNKNEIKYSIYADDLTVFLKDACSGEKFFELLN 535
Query: 182 TTALDFGLAINRDKTKMMIVDR 247
GL IN+ KT + + R
Sbjct: 536 KFKRVSGLEINKSKTDALWLGR 557
>SB_29603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
LSP LFNI+ I I D K++ L YADD + + + +E L++L+
Sbjct: 31 LSPTLFNIFINDIPEIFSSSCDPVKLDNTSKLNCLLYADDLVVQSDSATGLENCLQKLKF 90
Query: 185 TALDF 199
L F
Sbjct: 91 QKLKF 95
>SB_48077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 393 EVVDSFCYLGDTICAGGGCEAAIITR 418
>SB_19895| Best HMM Match : PHD (HMM E-Value=3.8e-08)
Length = 335
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 196 EVVDSFCYLGDTICAGGGCEAAIITR 221
>SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36)
Length = 1346
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 1316 EVVDSFCYLGDTICAGGGCEVAIITR 1341
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG 286
L YADD + + + D + L + GL +N KTK +++ ++N
Sbjct: 1191 LLYADDLVISSDSLDTLLAKLGMWKQGLESKGLRVNMSKTK-ILMSGPDLNSLRDSGKFP 1249
Query: 287 CEVVNSYVYLGSTITNAGGCEDEIRRRCA 373
C V V GS GC + ++C+
Sbjct: 1250 CAVCRKGV--GSNSIFCSGCSLWVHKKCS 1276
>SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 852 EVVDSFCYLGDTICAGGGCEVAIITR 877
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAG 286
L YADD + + + D + L + GL +N KTK +++ ++N
Sbjct: 727 LLYADDLVISSDSLDTLLAKLGMWKQGLESKGLRVNMSKTK-ILMSGPDLNSLRDSGKFP 785
Query: 287 CEVVNSYVYLGSTITNAGGCEDEIRRRCA 373
C V V GS GC + ++C+
Sbjct: 786 CAVCRKGV--GSNSIFCSGCSLWVHKKCS 812
>SB_5148| Best HMM Match : RVT_1 (HMM E-Value=1.7e-27)
Length = 286
Score = 32.3 bits (70), Expect = 0.18
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLED---WDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLR 172
+L PLL+ YT I +I+ + +S + D L+A T+ +E +
Sbjct: 161 VLGPLLYLAYTSPIAQIIARHGILYHLYADDSQLYVSFRGNSQDELLMAKTK--VECCVH 218
Query: 173 RLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG 340
+ + GL +N DK+++++ P ++H+ +V++ + S N G
Sbjct: 219 EINAWMVHNGLKLNHDKSELILFSSKFCPAPSLEHV---KVIDEIIKPASAARNLG 271
>SB_270| Best HMM Match : PHD (HMM E-Value=0.0037)
Length = 251
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+S+ YLG TI GGCE I R
Sbjct: 154 EVVDSFCYLGDTICAGGGCEVAIITR 179
>SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38)
Length = 622
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCE 349
EVV+S+ YLG TI GGCE
Sbjct: 457 EVVDSFCYLGDTICAGGGCE 476
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 31.9 bits (69), Expect = 0.24
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 PLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
P LF + E + +V + KG+ +G +I +ADDTTL + +E L R+
Sbjct: 392 PYLFILVLEVLAIMVRSSPEVKGLKIGKSEIKMTMFADDTTLFLKDMNSLEKLASRV 448
>SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25)
Length = 467
Score = 31.5 bits (68), Expect = 0.31
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLED---WDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLR 172
+L PLL+ YT I +I+ + +S + D L A T+ +E +
Sbjct: 157 VLGPLLYLAYTSPIAQIIARHGILYHLYADDSQLYVSFRGNSQDELLKAKTK--VECCVH 214
Query: 173 RLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG---- 340
+ + GL +N DK+++++ P ++H+ +VV+ + S N G
Sbjct: 215 EINAWMVHNGLKLNHDKSELILFSSKFCPAPSLEHV---KVVDEIIKPASAARNLGVILD 271
Query: 341 ---GCEDEIRRRCAVTRSSVERLTKI 409
ED ++ C R + KI
Sbjct: 272 KYLSFEDHLKTVCKSARFHPRNIGKI 297
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 31.5 bits (68), Expect = 0.31
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = +2
Query: 101 SNLRYADDTTLLASTR--DEIEVLLRR----LETTALDFGLAINRDKTKMMIV 241
S + YADDTT +AS + ++E L+ + A + +A+N +KTK+MIV
Sbjct: 502 SAMMYADDTTQIASGKRYSDVENTLQNGLASINIWARENQMALNNEKTKVMIV 554
>SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 566
Score = 31.5 bits (68), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 23 NIYTEYIMRIVLEDWDKGISVG-GRKIS---NLRYADDTTLLASTRDEIEVLLRRLE 181
++YTEYI + E K +S+G R ++ L YA T + ST +I LL +LE
Sbjct: 257 SLYTEYIKHAIAEQVKKPVSLGFPRSLTLAQKLLYAVPATPVESTASDITPLLTQLE 313
>SB_31243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV L + + T LA + D +E + L
Sbjct: 4 LGPLLFVLYTSKLFEIVQAHLPDAHCFADDTQLYLSFDPNSETDLADSLDAMERCINNLR 63
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L IN DKT+ +++
Sbjct: 64 TWMYQDKLKINDDKTEFLVI 83
>SB_50448| Best HMM Match : RVT_1 (HMM E-Value=3.7)
Length = 390
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV L + + T LA + D +E + L
Sbjct: 77 LGPLLFVLYTSKLFEIVQAHLPDAHCFADDTQLYLSFDPNSETDLADSLDAMERCINNLR 136
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L IN DKT+ +++
Sbjct: 137 TWMYQDKLKINDDKTEFLVI 156
>SB_15533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV L + + T LA + D +E + L
Sbjct: 632 LGPLLFVLYTSKLFEIVQAHLPDAHCFADDTQLYLSFDPNSETDLADSLDAMERCINNLR 691
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L IN DKT+ +++
Sbjct: 692 TWMYQDKLKINDDKTEFLVI 711
>SB_5801| Best HMM Match : UvdE (HMM E-Value=2.2)
Length = 255
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV L + + T LA + D +E + L
Sbjct: 45 LGPLLFVLYTSKLFEIVQAHLPDAHCFADDTQLYLSFDPNSDTDLADSLDAMERCINNLR 104
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L IN DKT+ +++
Sbjct: 105 TWMYQDKLKINDDKTEFLVI 124
>SB_2424| Best HMM Match : RVT_1 (HMM E-Value=6.2e-18)
Length = 657
Score = 30.7 bits (66), Expect = 0.55
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV L + + T LA + D +E + L
Sbjct: 344 LRPLLFVLYTSKLFEIVQAHLPDAHCFADDTQLYLSFDPNSETDLADSLDAMERCINNLR 403
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L IN DKT+ +++
Sbjct: 404 TWMYQDKLKINDDKTEFLVI 423
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 30.3 bits (65), Expect = 0.73
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 302 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI----CSRPKLR 357
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 358 KLAGKDLTVS 367
>SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 228
Score = 30.3 bits (65), Expect = 0.73
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 53 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI----CSKPKLR 108
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 109 KLAGKDLTVS 118
>SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 323
Score = 30.3 bits (65), Expect = 0.73
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 79 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI----CSKPKLR 134
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 135 KLAGKDLTVS 144
>SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99)
Length = 309
Score = 30.3 bits (65), Expect = 0.73
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 100 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI----CSKPKLR 155
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 156 KLAGKDLTVS 165
>SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08)
Length = 652
Score = 30.3 bits (65), Expect = 0.73
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 290 EVVNSYVYLGSTITNAGGCEDEIRRR 367
EVV+ + YLG TI GGCE I R
Sbjct: 513 EVVDFFCYLGDTICAGGGCEAAIITR 538
>SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 29.9 bits (64), Expect = 0.96
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +2
Query: 116 ADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
+ D L+A T+ +E + + + GL +N DK+++++ P ++H+ +V
Sbjct: 397 SQDELLMAKTK--VECCVHEINAWMVYNGLKLNHDKSELILFSSKFCPAPSLEHV---KV 451
Query: 296 VNSYVYLGSTITNAG-------GCEDEIRRRCAVTRSSVERLTKI 409
V+ + S N G ED ++ C R + + KI
Sbjct: 452 VDEIIKPASAAWNLGVILDKCLSFEDHLKTVCKSARFHLRNIGKI 496
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 29.9 bits (64), Expect = 0.96
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ R +P+ +
Sbjct: 716 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLICR----KPKSR 771
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 772 KLAGKDLTVS 781
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 29.9 bits (64), Expect = 0.96
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ R +P+ +
Sbjct: 498 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLICR----KPKSR 553
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 554 KLAGKDLTVS 563
>SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)
Length = 634
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMI 238
L YADD + + + + ++ L +T GL +N KTK+M+
Sbjct: 313 LLYADDLVIASDSLENLQQKLMLWKTGMESKGLRVNMKKTKVMV 356
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 293 VVNSYVYLGSTITNAGGCEDEIRRRCAVTRSSVERLTKI 409
VV+S+ YLG I+ GGCE R V L I
Sbjct: 439 VVDSFCYLGDNISAGGGCEAATITRVRVAWGKFRELLPI 477
>SB_7362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 116 ADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEV 295
+ D L+A T+ +E + + + GL +N DK+++++ P ++H+ +V
Sbjct: 414 SQDELLMAKTK--VECCVHEINAWMVHNGLKLNHDKSELILFSSKFCPAPSLEHV---KV 468
Query: 296 VNSYVYLGSTITNAG 340
V+ + S N G
Sbjct: 469 VDEIIKPASAARNLG 483
>SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5)
Length = 277
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 100 YADDTTQVASGSSVSEVESILTEELKKVNGWADENKMVLNQSKTKSMLI----CSKPKLR 155
Query: 275 HIAG 286
+AG
Sbjct: 156 KLAG 159
>SB_46440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +2
Query: 107 LRYADDTTLLASTRDEIEVL------LRRLETTALDFGLAINRDKTKMMIV 241
+ YADDTT +AS + +V L + A + +A+N +KTK+MIV
Sbjct: 1 MMYADDTTQIASGKSLSDVQNTLQNELAFINIWARENQMALNNEKTKVMIV 51
>SB_58923| Best HMM Match : RVT_1 (HMM E-Value=0.022)
Length = 270
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEV------LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
YADDTT +AS EV L+++ A + + +N+ KTK M++ ++P+++
Sbjct: 113 YADDTTQVASGSSVSEVGSILTEELKKVNGWANENKMVLNQSKTKSMLI----CSKPKLR 168
Query: 275 HIAGCEVVNS 304
+AG ++ S
Sbjct: 169 KLAGKDLTVS 178
>SB_15469| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 709
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWD-KGISVGGRKISNLRYADDTT 130
+SP LF + E + ++ E + KG+ +G ++ YADDTT
Sbjct: 645 ISPYLFILVLEVMATMIRECKEIKGLQIGNQEKKLALYADDTT 687
>SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGIS-VGGRKISNLRYADDTTLLASTRDEIEVLLRRL 178
I+SPLLF + ++IMR D +GI ++ +L +A D +L+S + + +RL
Sbjct: 136 IISPLLFLLAIDWIMRNTTADKPRGIQWTLTSQLEDLDFAYDIAVLSSI---VSICKKRL 192
Query: 179 -ETTAL 193
+ TAL
Sbjct: 193 TDCTAL 198
>SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 1.7
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTR--DEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S R ++ +L R
Sbjct: 482 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MIYADDTQLYVSIRPSEDRSSVLSR 531
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 532 LEVCVKDILIWCTSNGLACNPDKTEIV 558
>SB_34968| Best HMM Match : Plasmid_killer (HMM E-Value=4.3)
Length = 387
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 95 KISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDR 247
KI++L Y DD + A++ ++ +L+ D GL N K ++ V R
Sbjct: 106 KITSLLYIDDLKVYAASEAKLNRVLKMTREAMSDIGLEWNPKKCNVLHVKR 156
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 28.7 bits (61), Expect = 2.2
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYA-DDTTLLASTRDEIEVLLRRLE 181
L PLLFN+Y ++ ++ + S L ++ T+ + + + +
Sbjct: 337 LGPLLFNVYVSSLLEVIDKHLPMAHSYADDFQLYLSFSPSGTSSQEKAMESTQNCIADVR 396
Query: 182 TTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAGGCEDE 355
A L +N KT+ MI+ Q +IAG V + + + + N G DE
Sbjct: 397 LWARKNSLMLNDKKTEFMII--GTRQQLLKVNIAGISVGDDVIMKSTPVRNLGSWFDE 452
>SB_47016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 92 RKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKM 232
R I L + D TLL R E +LR LET GL N+DK M
Sbjct: 18 RYIVGLPWKQDKTLLPDNRPLAEQMLRSLET-----GLLKNQDKADM 59
>SB_36272| Best HMM Match : NinE (HMM E-Value=1.8)
Length = 393
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 71 KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLET 184
KGI + ++ +YADD T + + L+R LET
Sbjct: 225 KGIKIHENEVKISQYADDATCFLKDAESAQHLMRLLET 262
>SB_28723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 861
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF+IY + ++ + L + AD + R +E +R +
Sbjct: 666 LGPLLFSIYASKLFEVIKFHLPHAHAYADDTQPYLSFKADSSVGETEARCAMERCIRAVR 725
Query: 182 TTALDFGLAINRDKTKMMIV 241
+ + L IN DKT+ M++
Sbjct: 726 SWMVADKLKINEDKTEFMLI 745
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 176 LETTALDFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITN 334
+E ++ + + +N DK+K + ++ ++ P VVNS LG TI+N
Sbjct: 398 VEDSSREHKMQLNPDKSKKLTIELTHVFAPLTIEGKELPVVNSAKILGLTISN 450
>SB_10015| Best HMM Match : DEAD (HMM E-Value=2.2e-34)
Length = 629
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 140 STRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDRANI 256
S ++EI+VLLR L TTA + G + + T+ V NI
Sbjct: 64 SAKNEIKVLLRELLTTAAEIGGLNSPEATEAASVSLFNI 102
>SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25)
Length = 1486
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDW-DKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
L PLLF +YT + IV D ++ + T LA + D +E + L
Sbjct: 694 LGPLLFVLYTSKLFEIVQAHLPDAQCCADDTQLYLSFDPNSETDLADSLDAMERCINNLR 753
Query: 182 TTALDFGLAINRDKTKMMIV 241
T L N DKT+ +++
Sbjct: 754 TWMYQDKLKNNYDKTEFLVI 773
>SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33)
Length = 405
Score = 28.3 bits (60), Expect = 2.9
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDE--------- 154
+L P+L+++YT + ++ + ++ YADDT L S +
Sbjct: 287 VLGPMLYSLYTAPLANVIKQ----------HSVNFHFYADDTQLYLSFDPKHDSELKRAK 336
Query: 155 --IEVLLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQHIA-GCEVVNS 304
IE LR++ + L +N DKT++++++ + +P + IA EV++S
Sbjct: 337 CCIESCLRKITSWMTTNKLQLNSDKTELLVLNARHRLRPPLYSIAVNNEVISS 389
>SB_10048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 194 DFGLAINRDKTKMMIVDRANINQPEVQHIAGCEVVNSYVYLGSTITNAG 340
DFG +N+D++ + +V+ N+ +++ G + + +Y GS N G
Sbjct: 494 DFGFFLNQDESSVSLVE--NVYAEYARYLQGLGLRKAALYFGSKAGNKG 540
>SB_40707| Best HMM Match : RVT_1 (HMM E-Value=0.17)
Length = 208
Score = 27.9 bits (59), Expect = 3.9
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLE 181
+L+P+LFN++ ++ + D D G+ + R +L D L A T+ ++L L
Sbjct: 116 VLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSL--FDLRRLTAKTKTMERLILDAL- 172
Query: 182 TTALDFGLAINRDKTKMMIVDR 247
A D L +++ IVD+
Sbjct: 173 -FADDCALMAHQENHLQTIVDK 193
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIV 241
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++
Sbjct: 100 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI 148
>SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34)
Length = 899
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 LSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRY-ADDTTLLASTRDEIEVLLRRLE 181
L PLLF+IY + ++ + L + AD + R +E +R +
Sbjct: 430 LGPLLFSIYASKLFEVIKSHLPHAHAYADDTQLYLSFKADSSVGETEARCAMERCIRAVR 489
Query: 182 TTALDFGLAINRDKTKMMIV 241
+ + L IN DKT+ +++
Sbjct: 490 SWMVADKLKINEDKTEFVLI 509
>SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)
Length = 605
Score = 27.9 bits (59), Expect = 3.9
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAS---TRDEIEVLLR 172
+L PLLF+++ I ED + +G + YADDT L S ++D VL
Sbjct: 414 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSKDRSSVL-S 462
Query: 173 RLETTALDF-------GLAINRDKTKMM 235
RLE D GLA N DKT+++
Sbjct: 463 RLEVCVKDILIWCTSNGLACNSDKTEIV 490
>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIEVL----LRRLETTALDFGLAINRDKTKMMIV 241
YADDTT +A S+ E+E + L+++ A + + +N+ KTK M++
Sbjct: 679 YADDTTQVASGSSVSEVESILTEELKKVNGWANENKMVLNQSKTKSMLI 727
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIE-VLLRRLETTALDFGLAINRDKTKMMIVD 244
YADDTT +A S+ E+E +L L+ LD+G AI TK +D
Sbjct: 265 YADDTTQVASGSSVSEVESILTEELKKPILDYG-AIVWGSTKKQHID 310
>SB_53869| Best HMM Match : ABC_membrane (HMM E-Value=0.34)
Length = 403
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Frame = +2
Query: 113 YADDTTLLASTR--DEIEVLLRRLETTALDF-------GLAINRDKTKMM 235
YADDT L S R ++ +L RLE D GLA N DKT+++
Sbjct: 3 YADDTQLYVSIRPSEDRSSVLSRLEVCVKDILIWCTSNGLACNPDKTEIV 52
>SB_50566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNL 109
+L+P LF++Y ++ I +D G+S+ R ++L
Sbjct: 89 VLAPTLFSLYLSAMLEIAFKDCVDGVSIQTRHNADL 124
>SB_40446| Best HMM Match : RVT_1 (HMM E-Value=2.2e-16)
Length = 260
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 113 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSEDRSSVLSR 162
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 163 LEVCVKDILIWCTSNGLACNPDKTEIV 189
>SB_23604| Best HMM Match : RVT_1 (HMM E-Value=4.6e-13)
Length = 438
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 142 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSEDRSSVLSR 191
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 192 LEVCVKDILIWCTSNGLACNPDKTEIV 218
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 348 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSEDRSSVLSR 397
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 398 LEVCVKDILIWCTSNGLACNPDKTEIV 424
>SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I +V G+ V + YADDT L S ++ +L R
Sbjct: 233 VLGPLLFSLFFAPIEDVVRAH---GLGV-------MMYADDTQLYVSICPSEDRSSVLSR 282
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 283 LEVCVKDILIWCTSNGLACNPDKTEIV 309
>SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)
Length = 520
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 50 IVLEDWDKGISVGGRKISNLRYADDTTLLAST 145
+ ++ +G S G R ++ +AD TT+LA+T
Sbjct: 181 LTTQETSRGSSTGRRSLAAAMHADPTTILANT 212
>SB_15503| Best HMM Match : DUF217 (HMM E-Value=5.3)
Length = 196
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIE-VLLRRLETTALDFGLAINRDKTKMMIVD 244
YADDTT +A S+ E+E +L L+ LD+G+ + K I D
Sbjct: 71 YADDTTQVASGSSVSEVESILTEELKKPILDYGVFVWGSTKKQHIDD 117
>SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 630
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 322 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSEDRSSVLSR 371
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 372 LEVCVKDILIWCTSNGLACNPDKTEIV 398
>SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02)
Length = 385
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 92 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MMYADDTQLYVSICPSEDRSSVLSR 141
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 142 LEVCVKDILIWCTSNGLACNPDKTEIV 168
>SB_38763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +2
Query: 71 KGISVGGRKISNLRYADDTTLLASTRDEIEVLLRRLETTALDFGLAINRDKTKMMIVDR 247
K I+V +I YADD T+ E L L GL IN+ KT + + R
Sbjct: 17 KEITVNKNEIKYSIYADDLTVFLKDACSGEKLFELLNKFKRVSGLEINKSKTDALWLGR 75
>SB_16738| Best HMM Match : DUF217 (HMM E-Value=7.8)
Length = 261
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 113 YADDTTLLA--STRDEIE-VLLRRLETTALDFGLAINRDKTKMMIVD 244
YADDTT +A S+ E+E +L L+ LD+G AI TK +D
Sbjct: 205 YADDTTQVASGSSVSEVESILTEELKKPILDYG-AIVWGSTKKHHID 250
>SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +2
Query: 113 YADDTTLLASTRDEIEVLLRRLETT-------ALDFGLAINRDKTKMMIV 241
YADDTT+ ST ++++ + L T LD ++N KT M++
Sbjct: 795 YADDTTITFSTENDMDAIQESLNTDLACVRDWLLDNKHSLNVSKTNYMLI 844
>SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24)
Length = 568
Score = 26.6 bits (56), Expect = 8.9
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 ILSPLLFNIYTEYIMRIVLEDWDKGISVGGRKISNLRYADDTTLLAST--RDEIEVLLRR 175
+L PLLF+++ I ED + +G + YADDT L S ++ +L R
Sbjct: 482 VLGPLLFSLFFAPI-----EDVVRAHGLGA-----MIYADDTQLYVSICPSEDRSSVLSR 531
Query: 176 LETTALDF-------GLAINRDKTKMM 235
LE D GLA N DKT+++
Sbjct: 532 LEVCVKDILIWCTSNGLACNPDKTEIV 558
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 402 VSLSTEDLVTAQRLRISSSQPPALVIVEPR 313
V L +L TA + R++ +PP +V+P+
Sbjct: 84 VKLEINELFTATKRRVTRLRPPESAVVDPK 113
>SB_47320| Best HMM Match : Ion_trans (HMM E-Value=2.7e-34)
Length = 946
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 164 LLRRLETTALDFGLAINRDKTKMMIVDRANINQPEVQ 274
LLR +E +G+ + D+T + I D+ + N PE++
Sbjct: 631 LLRPIEGILDSYGMDVTLDETTLAIGDKDDGNSPELK 667
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,341,342
Number of Sequences: 59808
Number of extensions: 254347
Number of successful extensions: 968
Number of sequences better than 10.0: 244
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -