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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1041
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   256   5e-67
UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   230   3e-59
UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   183   4e-45
UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   178   1e-43
UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   170   2e-41
UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   169   5e-41
UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   168   1e-40
UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   167   3e-40
UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   164   2e-39
UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   162   6e-39
UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   162   8e-39
UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   161   1e-38
UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   161   1e-38
UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   161   1e-38
UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   161   1e-38
UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   161   2e-38
UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   160   3e-38
UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   159   5e-38
UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   154   2e-36
UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   153   3e-36
UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   152   8e-36
UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   151   1e-35
UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   151   1e-35
UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   149   6e-35
UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   148   1e-34
UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   146   3e-34
UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   145   1e-33
UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4; Dika...   145   1e-33
UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   144   1e-33
UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   144   2e-33
UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   142   5e-33
UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   142   9e-33
UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   141   1e-32
UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   140   2e-32
UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   140   3e-32
UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   136   6e-31
UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   136   6e-31
UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   135   8e-31
UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   134   2e-30
UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   133   3e-30
UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   133   4e-30
UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   131   2e-29
UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2...   131   2e-29
UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   130   4e-29
UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H; ...   128   2e-28
UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H; ...   127   2e-28
UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1...   125   1e-27
UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   124   3e-27
UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   124   3e-27
UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   121   1e-26
UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   120   2e-26
UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   120   2e-26
UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   120   4e-26
UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   119   5e-26
UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H; ...   119   7e-26
UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H; ...   119   7e-26
UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H; ...   118   1e-25
UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   117   2e-25
UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   117   2e-25
UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   117   3e-25
UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   115   1e-24
UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H; ...   114   2e-24
UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi (c...   114   2e-24
UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H; ...   114   2e-24
UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   114   2e-24
UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H; ...   113   3e-24
UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n...   113   5e-24
UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2...   112   6e-24
UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1...   111   1e-23
UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H; ...   111   2e-23
UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H; ...   110   3e-23
UniRef50_Q8WAI8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   107   2e-22
UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H; ...   107   2e-22
UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   107   3e-22
UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   106   4e-22
UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H; ...   105   1e-21
UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase, s...   104   2e-21
UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H; ...   104   2e-21
UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/...   104   2e-21
UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2...   104   2e-21
UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   103   3e-21
UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H; ...   103   3e-21
UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   102   7e-21
UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   1e-20
UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2...   101   1e-20
UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   2e-20
UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase, s...   101   2e-20
UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2; cell...   101   2e-20
UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1...   101   2e-20
UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H; ...   100   3e-20
UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H; ...   100   3e-20
UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    99   5e-20
UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2...    99   5e-20
UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   100   6e-20
UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    98   1e-19
UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    98   2e-19
UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H; ...    97   2e-19
UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2...    97   4e-19
UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    95   2e-18
UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Re...    94   2e-18
UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1 ...    94   2e-18
UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase, s...    94   3e-18
UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain 4...    94   3e-18
UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    94   3e-18
UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    94   3e-18
UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba...    93   4e-18
UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    93   4e-18
UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    93   4e-18
UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit ...    92   9e-18
UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H; ...    92   1e-17
UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    91   2e-17
UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    91   2e-17
UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2...    91   3e-17
UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H; ...    90   4e-17
UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH dehydro...    90   5e-17
UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H; ...    89   7e-17
UniRef50_A7KJL0 Cluster: NADH dehydrogenase subunit 1; n=12; Dys...    89   1e-16
UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H; ...    89   1e-16
UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    88   2e-16
UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    87   3e-16
UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1; ...    87   4e-16
UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    86   8e-16
UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H (F(...    86   8e-16
UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    83   6e-15
UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H; ...    82   1e-14
UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1; Blas...    81   2e-14
UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n...    80   4e-14
UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4; Ther...    79   1e-13
UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H (F(...    78   2e-13
UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H; ...    75   2e-12
UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    74   4e-12
UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;...    73   8e-12
UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    73   8e-12
UniRef50_O79095 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    72   1e-11
UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    69   1e-10
UniRef50_A0RY69 Cluster: NADH-ubiquinone oxidoreductase, subunit...    66   7e-10
UniRef50_Q34148 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    66   9e-10
UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG249...    64   3e-09
UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase, s...    54   5e-09
UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba...    63   7e-09
UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5; ...    62   1e-08
UniRef50_A3H7X8 Cluster: Respiratory-chain NADH dehydrogenase, s...    62   2e-08
UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;...    60   5e-08
UniRef50_A1RZ42 Cluster: Respiratory-chain NADH dehydrogenase, s...    60   6e-08
UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n...    59   8e-08
UniRef50_Q2WGD5 Cluster: NADH dehydrogenase subunit 1; n=1; Sela...    58   2e-07
UniRef50_A3DMA3 Cluster: Respiratory-chain NADH dehydrogenase, s...    57   4e-07
UniRef50_A1AUU5 Cluster: Respiratory-chain NADH dehydrogenase, s...    56   1e-06
UniRef50_A3DJU0 Cluster: Respiratory-chain NADH dehydrogenase, s...    55   2e-06
UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    54   3e-06
UniRef50_Q94YW8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    54   3e-06
UniRef50_A3MXU6 Cluster: Respiratory-chain NADH dehydrogenase, s...    54   3e-06
UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;...    53   5e-06
UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase, s...    52   9e-06
UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    52   1e-05
UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase, s...    52   1e-05
UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=...    52   2e-05
UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa...    51   2e-05
UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4; Sulf...    50   4e-05
UniRef50_Q8ZWX0 Cluster: NADH-ubiquinone oxidoreductase subunit;...    48   2e-04
UniRef50_A1RWL7 Cluster: Respiratory-chain NADH dehydrogenase, s...    48   2e-04
UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    48   2e-04
UniRef50_Q9YC30 Cluster: NuoH homolog; n=1; Aeropyrum pernix|Rep...    47   3e-04
UniRef50_A4XJP3 Cluster: Respiratory-chain NADH dehydrogenase, s...    45   0.002
UniRef50_Q8RDB7 Cluster: NADH:ubiquinone oxidoreductase subunit ...    44   0.002
UniRef50_P77937 Cluster: CooK; n=8; Bacteria|Rep: CooK - Rhodosp...    44   0.003
UniRef50_A5FW44 Cluster: Formate hydrogenlyase subunit 4-like pr...    44   0.004
UniRef50_Q0W3I4 Cluster: Ech hydrogenase, subunit B; n=1; uncult...    42   0.010
UniRef50_Q8TY38 Cluster: Membrane protein related to formate hyd...    42   0.017
UniRef50_Q7WT81 Cluster: EchB; n=3; Desulfovibrio|Rep: EchB - De...    41   0.023
UniRef50_A0UXN8 Cluster: Respiratory-chain NADH dehydrogenase, s...    40   0.040
UniRef50_A6DB52 Cluster: HYDROGENASE-4 COMPONENT C; n=3; Epsilon...    40   0.070
UniRef50_Q8THY9 Cluster: Hydrogenase-3 subunit; n=7; cellular or...    39   0.12 
UniRef50_Q3JDU8 Cluster: Respiratory-chain NADH dehydrogenase, s...    38   0.16 
UniRef50_Q0FXV6 Cluster: NuoH2 NADH chain H; n=1; Fulvimarina pe...    38   0.16 
UniRef50_UPI00015BC866 Cluster: UPI00015BC866 related cluster; n...    38   0.21 
UniRef50_A3Q532 Cluster: Respiratory-chain NADH dehydrogenase, s...    38   0.28 
UniRef50_Q57940 Cluster: Putative NADH-ubiquinone oxidoreductase...    37   0.37 
UniRef50_Q1AZS1 Cluster: Respiratory-chain NADH dehydrogenase, s...    36   0.65 
UniRef50_A5G4V9 Cluster: Respiratory-chain NADH dehydrogenase, s...    36   0.86 
UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2; ...    36   1.1  
UniRef50_Q37142 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    33   4.6  
UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    33   8.0  

>UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=44; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Apoda limacodes
          Length = 310

 Score =  256 bits (626), Expect = 5e-67
 Identities = 128/201 (63%), Positives = 141/201 (70%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ILGVLIGVAFLTLLERKVLGYIQ+RKGPNK+G IG+LQPFSDAIKLFTKE+TYPNFSNY 
Sbjct: 17  ILGVLIGVAFLTLLERKVLGYIQLRKGPNKLGIIGMLQPFSDAIKLFTKEQTYPNFSNYL 76

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YYFSPV  F+        +PY +NL+ FNLG+LFF C TSLGVY+V+IAGWSSNSNYAL
Sbjct: 77  SYYFSPVISFMLSLMIWMLMPYYFNLLSFNLGMLFFFCCTSLGVYMVMIAGWSSNSNYAL 136

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LGGLR+VAQTISYEV                    F  YQ+                   
Sbjct: 137 LGGLRAVAQTISYEVSLALIMMSCIIFIMDFNLLKFMDYQKLCWFMFIMIPLGLCWLSSS 196

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNRTPFDFAEGE ELVSG
Sbjct: 197 MAETNRTPFDFAEGESELVSG 217



 Score = 37.9 bits (84), Expect = 0.21
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFNIEY  GGFA IFLAEY
Sbjct: 217 GFNIEYSSGGFALIFLAEY 235


>UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1786; cellular organisms|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Drosophila melanogaster (Fruit
           fly)
          Length = 312

 Score =  230 bits (562), Expect = 3e-59
 Identities = 119/215 (55%), Positives = 133/215 (61%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ VL+ VAFLTLLERKVLGYIQIRKGPNKVG +G+ QPF DAIKLFTKE+TYP  SNY 
Sbjct: 14  IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYL 73

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YY SP+F           +P+   L  FNLG LFFLC TSLGVY V++AGWSSNSNYAL
Sbjct: 74  SYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYAL 133

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LGGLR+VAQTISYEV                   +F+ YQ                    
Sbjct: 134 LGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSIS 193

Query: 542 XAETNRTPFDFAEGERELVSGI*Y*I*KRGICLYF 646
            AETNR PFDFAEGE ELVSG        G+ L F
Sbjct: 194 LAETNRNPFDFAEGESELVSGFNVEYSSGGLALIF 228



 Score = 34.3 bits (75), Expect = 2.6
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  GG A IF+AEY
Sbjct: 214 GFNVEYSSGGLALIFMAEY 232


>UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=40; Deltocephalinae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Flexamia delongi
          Length = 310

 Score =  183 bits (445), Expect = 4e-45
 Identities = 95/201 (47%), Positives = 116/201 (57%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL+ V F TLLERKVL YIQ RKGPNK+G +GLLQPFSD +KLF KE+ +P  SN  
Sbjct: 10  LLFVLVSVGFFTLLERKVLSYIQCRKGPNKLGVLGLLQPFSDGMKLFMKEQFFPMNSNSM 69

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y   PVF  I         PY  N +   LG LFFLC +SLG+Y ++I GWSSNS Y++
Sbjct: 70  IYMVCPVFSMIQSLFIWVIFPYYVNCLEMGLGFLFFLCCSSLGIYGLMICGWSSNSVYSM 129

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +RS++Q ISYEV                    +Y +Q                    
Sbjct: 130 LGCIRSISQAISYEVSLSLILLCFFLLVDSYSFISYYNFQFSLWLIMLSLPIFFRWLSCC 189

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE+NRTPFDF+EGE ELVSG
Sbjct: 190 MAESNRTPFDFSEGESELVSG 210



 Score = 33.9 bits (74), Expect = 3.5
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  GGFA +F++EY
Sbjct: 210 GFNVEYGGGGFALLFISEY 228


>UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=8; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Glycaspis brimblecombei
          Length = 306

 Score =  178 bits (433), Expect = 1e-43
 Identities = 92/197 (46%), Positives = 114/197 (57%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           LI VAFLTLLERK+LGY+Q+RKGP+ VG  G+ QPFSDA+KLF+KE       N+F ++ 
Sbjct: 16  LISVAFLTLLERKLLGYVQLRKGPDSVGLWGVFQPFSDALKLFSKEYIIVQKINFFPFWL 75

Query: 194 SPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 373
           SPVF            PY Y L  + L +LF  C+ SL VY ++I+GWSSNS+YA LG +
Sbjct: 76  SPVFSLFVSLAVWFTFPYFYILCSWKLSVLFMFCVLSLNVYSIMISGWSSNSSYATLGCI 135

Query: 374 RSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAET 553
           RSVAQ++SYEV                    F+  QE                    AE 
Sbjct: 136 RSVAQSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCFTVPMFFMMFVSMLAEL 195

Query: 554 NRTPFDFAEGERELVSG 604
           NRTPFDF+EGE ELVSG
Sbjct: 196 NRTPFDFSEGESELVSG 212


>UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=12; Araneae|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Heptathela hangzhouensis
          Length = 304

 Score =  170 bits (414), Expect = 2e-41
 Identities = 88/201 (43%), Positives = 110/201 (54%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ VL+GVAF TL+ERKVLGYIQ RKGPNKVG +G+ QPFSDA+KLF KE  +   SN  
Sbjct: 8   LIMVLVGVAFFTLMERKVLGYIQCRKGPNKVGVLGIFQPFSDAVKLFGKEFYFLETSNMI 67

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +Y  PV            +PY   ++    GILFF   + +G++ +++ GW SNS ++L
Sbjct: 68  YFYLGPVLMIPLSLLLWILLPYSDGVLDLKYGILFFFICSGMGIFSLMLVGWGSNSKFSL 127

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG  R VAQ ISYEV                      +YQE                   
Sbjct: 128 LGSYRGVAQMISYEVSFMFIILGLLMISNSYLLIDILIYQEILWFFLGNLILLTMWLIVC 187

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NRTPFDFAEGE ELVSG
Sbjct: 188 MAELNRTPFDFAEGESELVSG 208



 Score = 33.5 bits (73), Expect = 4.6
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+E+  GGFA IF++EY
Sbjct: 208 GFNVEFMGGGFAIIFMSEY 226


>UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=7; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Thrips imaginis (Plague thrips)
          Length = 306

 Score =  169 bits (411), Expect = 5e-41
 Identities = 89/201 (44%), Positives = 115/201 (57%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL  L+ VAF+TL+ERK+LGY+QIR GPNKVG  G+LQP +DA+KL++KE  +P  SN  
Sbjct: 13  ILFSLVSVAFITLMERKILGYMQIRMGPNKVGLTGILQPMADAVKLYSKEINWPTQSNSM 72

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            ++ SP             +PY+   I   L +L FL +  LGVY ++I+GWSSNSNY+L
Sbjct: 73  PFFISPCLSLTLALTLCLIMPYLKPWINMKLSLLMFLAILGLGVYPILISGWSSNSNYSL 132

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G +R++AQTISYEV                  Y     Q+                   
Sbjct: 133 IGSMRALAQTISYEVSLVFILLSSLFISSSLSFYSLVETQK-LFYFFLFIVPFYMWLFST 191

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NRTPFDFAEGE ELVSG
Sbjct: 192 VAELNRTPFDFAEGESELVSG 212


>UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=112; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Lumbricus terrestris (Common earthworm)
          Length = 308

 Score =  168 bits (408), Expect = 1e-40
 Identities = 89/197 (45%), Positives = 108/197 (54%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           L+ +AF TL+ERK LGY  +RKGPNKVG +GL QPF+DAIKLF KE+  PN SN   + F
Sbjct: 17  LLAMAFYTLMERKFLGYFHLRKGPNKVGLMGLPQPFADAIKLFVKEQAKPNPSNQTPFLF 76

Query: 194 SPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 373
           +P    +         P+ +        +L+FLC++S+ VY   +AGWSSNS YALLG L
Sbjct: 77  APTMGLVLALLMWVIYPHSHQSFFIQFSVLYFLCVSSMNVYTTFLAGWSSNSKYALLGAL 136

Query: 374 RSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAET 553
           R VAQTISYEV                     + Y                      AET
Sbjct: 137 RGVAQTISYEVSMSLILLSSLIILSTMDFTKMFSYS---WILFMFIPLAVVWFITNLAET 193

Query: 554 NRTPFDFAEGERELVSG 604
           NRTPFDFAEGE ELVSG
Sbjct: 194 NRTPFDFAEGESELVSG 210



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  G FA IF+AEY
Sbjct: 210 GFNVEYSAGLFALIFMAEY 228


>UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3058; root|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Homo sapiens (Human)
          Length = 318

 Score =  167 bits (405), Expect = 3e-40
 Identities = 92/201 (45%), Positives = 111/201 (55%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ +LI +AFL L ERK+LGY+Q+RKGPN VG  GLLQPF+DA+KLFTKE   P  S   
Sbjct: 10  IVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTIT 69

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y  +P             +P    L+  NLG+LF L  +SL VY ++ +GW+SNSNYAL
Sbjct: 70  LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYAL 129

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G LR+VAQTISYEV                        QE                   
Sbjct: 130 IGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFIST 189

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNRTPFD AEGE ELVSG
Sbjct: 190 LAETNRTPFDLAEGESELVSG 210


>UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=7; Chelicerata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ornithodoros moubata (Soft tick)
          Length = 324

 Score =  164 bits (398), Expect = 2e-39
 Identities = 85/201 (42%), Positives = 108/201 (53%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL+ VAF TLLERKVLGYI +RKGPN VG IG+ QPF+DA+KLF KE  +  F N +
Sbjct: 9   LLMVLVSVAFFTLLERKVLGYIHLRKGPNSVGIIGMFQPFADAVKLFCKEMNFMKFMNIY 68

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y +  V   I          +  N +    G+++FLC++SLGVY+++  GW+SNS Y L
Sbjct: 69  MYMWISVISLILMMMGWILYYWGKNQVEIEYGLIYFLCVSSLGVYVILGGGWASNSKYGL 128

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG  R +AQ ISYEV                       +QE                   
Sbjct: 129 LGSFRGLAQVISYEVGMSFVLMGIIYFSGSYNIMVVSEFQEKFWMVWGMTGLFFLWMISS 188

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NR+PFD  EGE ELVSG
Sbjct: 189 FAEVNRSPFDLCEGESELVSG 209


>UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Crustacea|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Vargula hilgendorfii (Sea firefly) (Cypridina
           hilgendorfii)
          Length = 318

 Score =  162 bits (394), Expect = 6e-39
 Identities = 92/216 (42%), Positives = 115/216 (53%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           +GVL+GVAF TLLERK+LGY  +RKGPNKVG+IG+LQPF+DA+KLFTKE   P  S+   
Sbjct: 26  VGVLMGVAFFTLLERKILGYAGMRKGPNKVGYIGILQPFADAVKLFTKEDVVPMKSSVML 85

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           Y  SPV             PY +  + F+ G L+  C   +GVY + ++GWSSNS YA++
Sbjct: 86  YMISPVLALFMPLCMWCVFPYWFVGVEFSWGWLYVFCGLGMGVYSLFLSGWSSNSKYAVM 145

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G LR+VAQ ISYEV                  Y   L+                      
Sbjct: 146 GSLRAVAQMISYEV---VLAMVVMLFVFFLGSYDMGLWGYTSLLGVGLLPLLWIWMTVML 202

Query: 545 AETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFFG 652
            E+ R+PFD AEGE ELVSG        G  L F G
Sbjct: 203 GESQRSPFDLAEGESELVSGFNTEYSGVGFALLFMG 238


>UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Paraspadella gotoi|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paraspadella gotoi
          Length = 297

 Score =  162 bits (393), Expect = 8e-39
 Identities = 89/201 (44%), Positives = 111/201 (55%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ +LIGVAF TL+ERK+L  IQ+R GPNK  ++GLL PF+DA+KL TKE   P  SN  
Sbjct: 17  IIIILIGVAFFTLMERKILSLIQLRVGPNKPSYMGLLVPFADALKLITKENNIPQGSNKL 76

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y   P+F  +         P   + +    G+LFFLCL+SLGVY ++  GWSSNS Y+L
Sbjct: 77  LYLLLPLFTLMIPLNMWVLNPSNMSSLTTKSGLLFFLCLSSLGVYAIMFLGWSSNSKYSL 136

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G +RSVAQTISYEV                    + L                      
Sbjct: 137 MGAIRSVAQTISYEVTMAIIIIHHVIIN------MYMLKNLGVTPTNFFIIIMVMMMISM 190

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE+NR PFDFAEGE ELVSG
Sbjct: 191 LAESNRAPFDFAEGESELVSG 211


>UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=24; Formica|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Formica truncorum
          Length = 293

 Score =  161 bits (392), Expect = 1e-38
 Identities = 87/194 (44%), Positives = 104/194 (53%)
 Frame = +2

Query: 23  VAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 202
           VAFLTLLERK+LGY+Q+RKGPNKV  IG+ QPFSDAIKLF KE  Y   SNY  +Y  PV
Sbjct: 1   VAFLTLLERKILGYVQMRKGPNKVMIIGMFQPFSDAIKLFNKELFYVYKSNYNLFYLCPV 60

Query: 203 FRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 382
             F          PYI N+   N  +L  + L S+  Y +I  GWSSNS Y+++G +RSV
Sbjct: 61  LMFSVMLMSWMLFPYITNIYFLNYSMLLLILLMSISGYTMIFMGWSSNSIYSMMGSMRSV 120

Query: 383 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 562
           +Q +SYEV                    F  YQ                     AE NR+
Sbjct: 121 SQMLSYEVSFIFIIFILMIMSESYSFLDFMNYQIYVWYLFIFYPLFLMYFISVLAELNRS 180

Query: 563 PFDFAEGERELVSG 604
           P DF EGE ELVSG
Sbjct: 181 PMDFIEGESELVSG 194



 Score = 35.5 bits (78), Expect = 1.1
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFNIEY  GGF  IFLAEY
Sbjct: 194 GFNIEYFSGGFTLIFLAEY 212


>UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=51; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Diuraphis noxia (Russian wheat aphid)
          Length = 315

 Score =  161 bits (392), Expect = 1e-38
 Identities = 85/200 (42%), Positives = 107/200 (53%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L V + VAF TLLERKVLGYIQ+RKGPNK    G LQP  D +KLF KE  YP+  N+F 
Sbjct: 19  LMVFMSVAFFTLLERKVLGYIQLRKGPNKFFLKGALQPMGDGLKLFFKEVNYPSNMNFFI 78

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           +  SP+   +         PYI        G+++  C +SL VYI ++  WSSNSNY++L
Sbjct: 79  FMISPMLGLLISIFFWFIYPYIGMNYIMGFGLIYMFCCSSLMVYIFLMVSWSSNSNYSVL 138

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G +R ++Q ISYEV                    FY+YQ                     
Sbjct: 139 GMIRFISQMISYEVSMMIIIMNLMFLINSFNLNDFYIYQMNSKFFFFLFLIFILLLISFM 198

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE NR+PFDF+EGE ELVSG
Sbjct: 199 AEMNRSPFDFSEGESELVSG 218


>UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=284; Coelomata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 324

 Score =  161 bits (392), Expect = 1e-38
 Identities = 88/198 (44%), Positives = 111/198 (56%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VLI VAFLTL+ERKVLGY+Q+RKGPN +G  GLLQ  +D +KLF KE   P+ ++   + 
Sbjct: 19  VLIAVAFLTLVERKVLGYMQLRKGPNVMGPRGLLQSVADGVKLFIKEPIRPSMASPILFL 78

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +PV   I        +P  Y ++  NLGILF + ++SL VY ++ +GW+SNS YAL+G 
Sbjct: 79  TAPVLALILAMMLWAPMPMPYPVLDLNLGILFIMAISSLAVYSILGSGWASNSKYALIGA 138

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           LR+VAQTISYEV                    F   QE                    AE
Sbjct: 139 LRAVAQTISYEVSLGLILLSAVIFSGGYTLQTFNTTQEDTWLLLPLWPLAIMWFISTLAE 198

Query: 551 TNRTPFDFAEGERELVSG 604
           TNR PFD  EGE ELVSG
Sbjct: 199 TNRAPFDLTEGESELVSG 216



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  G FA  FLAEY
Sbjct: 216 GFNVEYAAGPFALFFLAEY 234


>UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=144; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Cyanidium caldarium
          Length = 344

 Score =  161 bits (392), Expect = 1e-38
 Identities = 89/219 (40%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ ++I +A+LTL+ERK++G IQ RKGPN VG  GLLQP +D +KL  KE + PN +N F
Sbjct: 31  IIPLIIAIAYLTLIERKIIGSIQKRKGPNIVGIFGLLQPIADGLKLLLKETSLPNSANIF 90

Query: 182 CYYFSPVFRFIXXXXXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +  +P+  F         +P+  I      N+GIL+ L ++SLGVY +II+GW+SNS Y
Sbjct: 91  IFIIAPILTFFLALCAWAIMPFNEINFYSNLNIGILYLLAISSLGVYGIIISGWASNSKY 150

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           A LGGLRS AQ ISYEV                      L Q+                 
Sbjct: 151 AFLGGLRSAAQIISYEVSIGLIIINVLLCSGTLNLKEIVLAQQNIWYIFPLFPLFLMFFI 210

Query: 536 XXXAETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFFG 652
              AETNR+PFD  E E ELV+G        G  L+F G
Sbjct: 211 SSLAETNRSPFDLPEAEAELVAGYNVEYSAMGFALFFLG 249


>UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=365; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 325

 Score =  161 bits (390), Expect = 2e-38
 Identities = 87/219 (39%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL +L+GVAFL L ERKV+ ++Q RKGP+ VG  GLLQP +D +KL  KE   P+ +N+F
Sbjct: 13  ILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFF 72

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +  +PV  F+        +P+ Y ++    N+G+L+   ++SLGVY +IIAGWSSNS Y
Sbjct: 73  LFRMAPVATFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKY 132

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           A LG LRS AQ +SYEV                      + Q+                 
Sbjct: 133 AFLGALRSAAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFI 192

Query: 536 XXXAETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFFG 652
              AETNR PFD  E E ELV+G        G  L+F G
Sbjct: 193 SCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLG 231


>UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=17; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Rhipicephalus sanguineus (Brown dog tick)
          Length = 313

 Score =  160 bits (388), Expect = 3e-38
 Identities = 85/201 (42%), Positives = 105/201 (52%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL VL+ +AF TL+ERK LGY  IRKGPNK G +GLLQP SDA+KLF+KE     + N F
Sbjct: 12  ILMVLLSIAFFTLMERKFLGYCHIRKGPNKTGAMGLLQPISDALKLFSKEMNKMFYMNKF 71

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
               SP+   +          +  N +  N+ I+FFLC++SL  Y ++ +GWSSNS Y+L
Sbjct: 72  IQIISPLIMILMMMMMWMIFYFSNNALNLNMSIIFFLCISSLASYAILFSGWSSNSKYSL 131

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G  R  AQ ISYEV                    F   QE                   
Sbjct: 132 IGSYRGFAQVISYEVSMAMILISLAIIPQSYNFISFLKIQETFPLIFSFLPIFIIWIITV 191

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NR PFD AEGE ELVSG
Sbjct: 192 LAELNRVPFDLAEGESELVSG 212


>UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=14; Aleyrodidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Aleurodicus dispersus
          Length = 318

 Score =  159 bits (386), Expect = 5e-38
 Identities = 78/201 (38%), Positives = 109/201 (54%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++   + +AF TL+ERK+L Y+Q RKGPNK   +G+LQPFSDAIKLF+KE      SNY 
Sbjct: 11  LISTFLSIAFFTLMERKILSYMQNRKGPNKTLIMGILQPFSDAIKLFSKEMNLNFKSNYI 70

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YY  P+   I         P+ +N       IL  + + S+ + I+++  WSSNSNYA+
Sbjct: 71  IYYMFPLLNIICSLMMWMIYPFYWNFNFNKFNILMLMSMMSINMIIIMLISWSSNSNYAM 130

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G +RS+AQ ISYE+                   + ++ Q+                   
Sbjct: 131 IGLMRSIAQMISYEINLMIIIMTIVNLTEQLNFNYMFIMQKYMMFYLYLMFLFYIWIITI 190

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNRTPFDF+EGE EL+SG
Sbjct: 191 LAETNRTPFDFSEGESELISG 211



 Score = 34.3 bits (75), Expect = 2.6
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFNIEY    FAFIFLAEY
Sbjct: 211 GFNIEYSSFSFAFIFLAEY 229


>UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Xenos vesparum
          Length = 318

 Score =  154 bits (373), Expect = 2e-36
 Identities = 83/198 (41%), Positives = 103/198 (52%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ VAF+ L ERK+LGYI IRK  NKVGFIGL+QP  D IKL  KE +    SN   + 
Sbjct: 25  MLLSVAFIVLYERKILGYIHIRKSVNKVGFIGLIQPLGDGIKLLFKESSLLEKSNILLFL 84

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +P+  F         +PY  N+  FNL ILFFL L S+ V  +I+ GWSSNS+Y+ L  
Sbjct: 85  MAPLMNFFLVMLMYMVLPYSGNMDWFNLSILFFLVLLSMNVLSIILIGWSSNSSYSFLSA 144

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           LR V Q ISYE+                      + Q+                    AE
Sbjct: 145 LRMVVQMISYEISLMFLLLSIMVSVESFSVLNLEMVQKYLWLVSCYMLLSVMIFVIFLAE 204

Query: 551 TNRTPFDFAEGERELVSG 604
           +NR PFDF EGE ELVSG
Sbjct: 205 SNRVPFDFIEGESELVSG 222



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFNIEY  G FA IF+AEY
Sbjct: 222 GFNIEYGSGYFALIFVAEY 240


>UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Lepeophtheirus salmonis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Lepeophtheirus salmonis (salmon
           louse)
          Length = 295

 Score =  153 bits (372), Expect = 3e-36
 Identities = 86/198 (43%), Positives = 107/198 (54%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL+ VAF+TLLERK++GY Q RKGPNKV F+G+LQPFSDAIKLF KE    +F NY  Y+
Sbjct: 6   VLVNVAFITLLERKIIGYSQARKGPNKVSFLGILQPFSDAIKLFVKEVGSFSFVNYSVYW 65

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            SPV             P   +   +++  L  L   S+ VY + ++GWSSN  Y+ +GG
Sbjct: 66  ISPVVGLSVALLIWNVYPLEMSFGSWSISWLGLLAGMSVSVYPLFLSGWSSNCVYSHIGG 125

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R VAQ ISYEV                      L+ E                    AE
Sbjct: 126 VRGVAQVISYEVVFTILVFSLMSLSGSLTLVGSMLFSEYFYVYMLSPLLVYLWFLTGLAE 185

Query: 551 TNRTPFDFAEGERELVSG 604
           TNRTPFDF+EGE ELVSG
Sbjct: 186 TNRTPFDFSEGESELVSG 203


>UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Inversidens japanensis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Inversidens japanensis
          Length = 292

 Score =  152 bits (368), Expect = 8e-36
 Identities = 79/201 (39%), Positives = 109/201 (54%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++  L+G+AFLTLLERK LGY+Q+RKGPNK+G  GL QP +DA+KL TK  + P   N  
Sbjct: 5   VVVALVGMAFLTLLERKSLGYMQLRKGPNKLGLTGLPQPLADAMKLLTKTTSTPTICNPI 64

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
               +P+             P  +++   +LG+L F+C+++  VY +++ GWS+NS +AL
Sbjct: 65  AMSVAPLLALALSALLWHLYPTTHSVSHKSLGLLLFICISATAVYSIMVGGWSTNSKFAL 124

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +R++AQTISYE+                    F                        
Sbjct: 125 LGAMRAMAQTISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLIIPMTLVWLTIM 184

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR PFDFAEGE ELVSG
Sbjct: 185 LAETNRAPFDFAEGESELVSG 205


>UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Unionidae|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Lamprotula rochechouarti
          Length = 206

 Score =  151 bits (366), Expect = 1e-35
 Identities = 73/132 (55%), Positives = 88/132 (66%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+GVAF TLLERK LGY QIRKGPNKVG IG+ QP +DA+KLF KE   P  SNY  + 
Sbjct: 16  ILLGVAFFTLLERKALGYFQIRKGPNKVGMIGIPQPLADALKLFVKEWVMPTSSNYLPFI 75

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +P    I         P         LG+L FLC++SL VY  ++AGWSSNS YALLG 
Sbjct: 76  MTPTIMLILALSLWQLYPSFMLTSQMILGMLLFLCISSLAVYTTLMAGWSSNSKYALLGA 135

Query: 371 LRSVAQTISYEV 406
           +R++AQTISYEV
Sbjct: 136 IRAMAQTISYEV 147


>UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=5; Endopterygota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Apis mellifera ligustica (Common honeybee)
          Length = 305

 Score =  151 bits (366), Expect = 1e-35
 Identities = 83/198 (41%), Positives = 102/198 (51%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VLI VAFLTLLERK+LGYIQ RKGPNK+   G+ QPFSDA+KL +KE  + N+SN F Y 
Sbjct: 14  VLISVAFLTLLERKILGYIQDRKGPNKIMLFGMFQPFSDALKLLSKEWFFFNYSNLFIY- 72

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            SP+  F          P+   +      ILF L +  L VY V+  GW SN NYA+LG 
Sbjct: 73  -SPMLMFFLSLVMWILYPWFGFMYYIEFSILFMLLVLGLSVYPVLFVGWISNCNYAILGS 131

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R V+  IS+E+                    F+ +Q                      E
Sbjct: 132 MRLVSTMISFEINLFFLVFSLMMMVESFSFNEFFFFQNNIKFAILLYPLYLMMFTSMLIE 191

Query: 551 TNRTPFDFAEGERELVSG 604
            NRTPFD  EGE ELVSG
Sbjct: 192 LNRTPFDLIEGESELVSG 209


>UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=20; Sigmurethra|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Albinaria coerulea (Land snail)
          Length = 299

 Score =  149 bits (361), Expect = 6e-35
 Identities = 85/200 (42%), Positives = 106/200 (53%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L +L+ VAF TLLERKVL  +QIRKGPNKVG  G++QP +DA+KLF KE   P  SN F 
Sbjct: 11  LCILLSVAFYTLLERKVLSSMQIRKGPNKVGLYGIIQPIADALKLFLKEFFIPVNSNSFM 70

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           +   P+             P ++     +  ++ F+ LT   VY++I AGWSSNS Y+ L
Sbjct: 71  FMILPLLGLTLSLMLWAVFPSMWMFNFHSYLLMLFVALTGTFVYVIIFAGWSSNSKYSFL 130

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           GG+R+ AQTISYEV                  Y +Y                        
Sbjct: 131 GGMRAAAQTISYEV---SMLLLLFFAVLMYRTYSWYEAGLSSPIGIIIFIIMFIWFASCL 187

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFDFAEGE ELVSG
Sbjct: 188 AETNRAPFDFAEGESELVSG 207



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFNIEY  G FA +FLAEY
Sbjct: 207 GFNIEYYGGMFALLFLAEY 225


>UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=675; Arachnida|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Pardosa hyperborea
          Length = 306

 Score =  148 bits (359), Expect = 1e-34
 Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 1/201 (0%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L +LI VAF TLLERK+L YIQIRKGPNKVG +G+LQPFSDAIKLF K        N+  
Sbjct: 12  LSILISVAFYTLLERKILSYIQIRKGPNKVGMMGILQPFSDAIKLFNKNLLPLESMNFTL 71

Query: 185 YYFSPVFRFIXXXXXXXXIPY-IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            + +P             + Y    LI     +L F  L+S+ VY +++ GWS+NS Y  
Sbjct: 72  SFMTPFMSLFISLCMISILMYNDSTLIDIKHSLLMFFILSSMSVYFILLIGWSTNSKYCH 131

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +RSVAQ ISYEV                        Q                    
Sbjct: 132 LGSIRSVAQMISYEVPFFMMILFLVLLSQSYSFTQMEETQYLLYYFWGNMLLFMMWLSSC 191

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR+PFDFAEGE ELVSG
Sbjct: 192 LAETNRSPFDFAEGESELVSG 212


>UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Heterodoxus macropus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Heterodoxus macropus (wallaby
           louse)
          Length = 297

 Score =  146 bits (355), Expect = 3e-34
 Identities = 80/201 (39%), Positives = 108/201 (53%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ +L+ VAF TLLERK+LGYI  RKGPNKV   G+LQP  DA+KL TK+ +   +SN F
Sbjct: 11  VIMMLLTVAFFTLLERKILGYIHFRKGPNKVLLKGVLQPIVDAMKLITKDDSPIIYSNIF 70

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YY SP+F FI        +P  + +  +    L    L  +GVY + ++GWSSNS YA 
Sbjct: 71  LYYISPMFSFIMSMIIWMILPLQFIIFNWVNSFLILFMLLGMGVYSMFLSGWSSNSKYAY 130

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG LR+V+Q+ISYE+                  Y+   +                     
Sbjct: 131 LGSLRAVSQSISYEILMSMLFIALMMTTKGMSIYYILKFD---PLVFFLFPFFIAYLFIG 187

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NR+PFD +EGE ELV+G
Sbjct: 188 LAELNRSPFDLSEGESELVAG 208


>UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=15; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Tigriopus japonicus
          Length = 306

 Score =  145 bits (351), Expect = 1e-33
 Identities = 80/198 (40%), Positives = 105/198 (53%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ VAF+TL ERK+LG  Q+RKGPNKV   G+LQP +DA+KLF KE   P  SN+F + 
Sbjct: 15  LLVNVAFVTLFERKILGCAQLRKGPNKVSLGGVLQPLADAVKLFFKETVVPCESNFFMFI 74

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +P   F+        +    +       ++F LC+  +GVY + IAGWSSNS YAL+G 
Sbjct: 75  SAPASGFMVFSLCSSALHASSDSGYVEYVMVFVLCVLGMGVYPLFIAGWSSNSKYALIGS 134

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           LR +AQ+ISYE+                       +                      AE
Sbjct: 135 LRGIAQSISYEISLSLIVLSMMLLWQSFSIESAADFLPSPGLTVFLFPLLSLWLISCLAE 194

Query: 551 TNRTPFDFAEGERELVSG 604
           +NRTPFDFAEGE ELVSG
Sbjct: 195 SNRTPFDFAEGESELVSG 212


>UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4;
           Dikarya|Rep: NADH dehydrogenase subunit 1 - Pleurotus
           ostreatus (Oyster mushroom) (White-rot fungus)
          Length = 346

 Score =  145 bits (351), Expect = 1e-33
 Identities = 84/203 (41%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL+ VAF+T++ERK L   Q R GPN VG+ GLLQPF+DA+KL  KE   P+ SN  
Sbjct: 32  VLPVLLSVAFMTIIERKQLAAHQRRVGPNIVGYYGLLQPFADALKLILKETIIPSQSNKV 91

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            ++ +P+   I        IP+   L    F+LGIL+ L L+SLGVY V++AGWS+NS Y
Sbjct: 92  LFFLAPISTLIFSLLGWGIIPFGQGLALSDFSLGILYTLALSSLGVYGVLLAGWSANSKY 151

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           A LG LRS A  ISYE+                        Q+                 
Sbjct: 152 AFLGSLRSTAAMISYELILSSAILIIILLTGSLNYNTIIEIQQSVWFIIPLLPVFIFYFI 211

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AET+RTPFD  E E ELV+G
Sbjct: 212 AILAETSRTPFDLQEAESELVAG 234


>UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Pectinidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Pecten maximus (King scallop) (Pilgrim's clam)
          Length = 354

 Score =  144 bits (350), Expect = 1e-33
 Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL+ VA+LTL ERKVL   Q+RKGP  VG++G++QPF+D IKLF+KE   P+ SN   ++
Sbjct: 53  VLLSVAYLTLFERKVLAASQVRKGPEMVGWLGIMQPFADGIKLFSKEYFTPSNSNPALFF 112

Query: 191 FSPVFRFIXXXXXXXXIPYIYNL-ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 367
             P F  +         P I+   + F  G L+ L + S+GVY V++ GWSSNS YA+ G
Sbjct: 113 LGPCFMLLHSFILWGCSPGIWGCGVYFFWGGLYVLSVLSVGVYGVVLCGWSSNSRYAMFG 172

Query: 368 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 547
            +R++AQ ISYEV                      L Q                     A
Sbjct: 173 AVRALAQVISYEVMLVFLYLCPFFVVGSLDLESVSLSQVSGCNGGVLFLVLPWWVFCVLA 232

Query: 548 ETNRTPFDFAEGERELVSG 604
           E+NR PFDF EGE ELVSG
Sbjct: 233 ESNRAPFDFVEGESELVSG 251



 Score = 36.3 bits (80), Expect = 0.65
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  GGFA IF+AEY
Sbjct: 251 GFNVEYGSGGFAMIFIAEY 269


>UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Mytilus|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Mytilus edulis (Blue mussel)
          Length = 305

 Score =  144 bits (348), Expect = 2e-33
 Identities = 78/201 (38%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           +GVL+ V F TLLERK+L  I IRKGP+KV ++G+LQPFSDA KL  KE   P  +N   
Sbjct: 14  VGVLLAVGFYTLLERKILAIIMIRKGPSKVSYMGILQPFSDAGKLLCKEFIVPTRANVGP 73

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           +  +P              PY    + +  G++ F+ +TS+ VY V+++GW+SNS Y+LL
Sbjct: 74  FILAPALMLAISLLGWLLYPYKSAEVFYVFGVILFMVITSVSVYGVMMSGWASNSKYSLL 133

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXX 541
           G +R++AQ+ISYE+                      ++Q+                    
Sbjct: 134 GAVRAMAQSISYEIPMGFIFFCVVLCSGVFMFQEISVFQQSLFFFFLPLCVVMLVWMLCM 193

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR PFDF EGE ELVSG
Sbjct: 194 LAETNRAPFDFVEGESELVSG 214



 Score = 33.5 bits (73), Expect = 4.6
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           G+N+EY  GGFA +F+AEY
Sbjct: 214 GYNVEYSGGGFAVMFIAEY 232


>UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=117; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Acanthamoeba castellanii (Amoeba)
          Length = 369

 Score =  142 bits (345), Expect = 5e-33
 Identities = 82/203 (40%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL V++ VAFLTL ERKVL  IQ RKGPN  GF+G+LQP +DA+KL  KE   P  ++  
Sbjct: 16  ILNVILTVAFLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPVPQNASSV 75

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            ++  P+   I        IP+    +    N+GIL+   ++SL    +I+AGWSSNS Y
Sbjct: 76  LFFGGPLILLILSLSAWFVIPFNNETVVSDINIGILYVFMVSSLNTLNIIVAGWSSNSRY 135

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           A LG LRS+AQ I+YEV                        Q+                 
Sbjct: 136 AFLGALRSIAQVIAYEVVIGIIIINIIVLSGSLNFLKIVWAQKDLWYAFVLWAQFFLFFI 195

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AETNR PFD AE E ELVSG
Sbjct: 196 AMLAETNRHPFDLAEAESELVSG 218


>UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1 -
           Smittium culisetae (Gut fungus)
          Length = 323

 Score =  142 bits (343), Expect = 9e-33
 Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I  VL  +AFLTL ERKV+G +Q R GPNKVG  G+LQP +D IKL  KE   P  SN  
Sbjct: 12  IFPVLFAIAFLTLTERKVMGSMQRRVGPNKVGIFGILQPIADGIKLLLKETIIPYQSNKL 71

Query: 182 CYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
               +P+  F         IP+   Y +    LGI++ L ++S+GV  +I+AGWS NS Y
Sbjct: 72  LLILAPLLIFTINLIGWAPIPFSKGYQISDMELGIIYILAISSIGVVGIILAGWSGNSKY 131

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           +L+G LR+ AQ +SYE+                      L+Q+                 
Sbjct: 132 SLMGCLRTTAQLVSYELLLGLTILTVILIINNFNINNIILFQQSIYFFIPLLPLFIIIFI 191

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AETNR PFD  E E ELVSG
Sbjct: 192 SAIAETNRPPFDLVESESELVSG 214


>UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=10; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Ustilago maydis (Smut fungus)
          Length = 331

 Score =  141 bits (342), Expect = 1e-32
 Identities = 80/203 (39%), Positives = 109/203 (53%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ +L+ VAF+T++ERKV+G +Q R GPN VG+  LLQPF+DA+KL  KE+  P+ +   
Sbjct: 15  LVPILLSVAFMTVIERKVMGSMQRRIGPNVVGYYALLQPFADALKLVIKEQVIPSQATKS 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            ++ +P+   I        IP    L    F+LGIL+ L L+S+GVY ++ AGWS+NS Y
Sbjct: 75  LFFLAPMVTLIFSLLGWGVIPLGPGLALSDFSLGILYSLALSSIGVYGILFAGWSANSKY 134

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           A LG LRS AQ ISYE+                        Q+                 
Sbjct: 135 AFLGSLRSTAQMISYELIYSAAVLAVILLCGTFNITEIIESQQSVWYIMPLLPIFILFFV 194

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AETNRTPFD  E E ELV+G
Sbjct: 195 SALAETNRTPFDLPEAESELVAG 217


>UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=120; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Branchellion sp. Borneo
          Length = 205

 Score =  140 bits (340), Expect = 2e-32
 Identities = 76/194 (39%), Positives = 99/194 (51%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L  L+ +AF TLLERK+LGY Q+RKGPNKV  +G+ QP +DA KLF KE+  P  SN  
Sbjct: 13  MLMALLAMAFYTLLERKLLGYFQLRKGPNKVSIMGIPQPLADAAKLFLKEQHTPMTSNKL 72

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +  SP+             P++         IL+ LC++++ VY   ++GWSSNS Y+L
Sbjct: 73  SFIMSPILGLFLTLMLWGSYPHLNPSFWIQFSILYILCVSAMNVYATFVSGWSSNSKYSL 132

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG LR VAQTISYE+                      L                      
Sbjct: 133 LGALRGVAQTISYEISMSLILLSVLLMTMNMDMNKINL-NSMSPLFMSLILITILWFITN 191

Query: 542 XAETNRTPFDFAEG 583
            AETNR+PFDFAEG
Sbjct: 192 LAETNRSPFDFAEG 205


>UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Paratomella rubra|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paratomella rubra
          Length = 313

 Score =  140 bits (339), Expect = 3e-32
 Identities = 81/201 (40%), Positives = 103/201 (51%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ +L+ VAF TLLERK+L Y Q+RKGPN VG  G LQP +D +KLF KE   P  S  F
Sbjct: 16  VVPILLSVAFFTLLERKLLSYSQLRKGPNVVGS-GFLQPIADGLKLFIKEVVVPLSSQNF 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YY SP+F F           +      +N    FFL ++S  V+  + +GWSSNS +A+
Sbjct: 75  LYYLSPLFVFFLSLFLWSIFFFSKLFFVYN-SFFFFLSVSSXSVFFFLSSGWSSNSFFAI 133

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +R+ AQ ISYEV                  YF   +                     
Sbjct: 134 LGSIRAAAQMISYEVVMSFILVFFFLLXKTNSFYFIMDFSLYFENLLFFFFFFFFWMVVI 193

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR+PFD  EGE ELVSG
Sbjct: 194 LAETNRSPFDLTEGESELVSG 214



 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 603 GFNIEYRRGGFAFIFLAEY 659
           GFN+EY  G FAF FLAEY
Sbjct: 214 GFNVEYSAGPFAFFFLAEY 232


>UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Campanulotes bidentatus compar|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Campanulotes bidentatus compar
           (small pigeon louse)
          Length = 299

 Score =  136 bits (328), Expect = 6e-31
 Identities = 81/201 (40%), Positives = 103/201 (51%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL+ VAF +L ERK++G +Q RKGPNKVG  G+LQPF+DA+KL +K    P+    F
Sbjct: 15  LLMVLLSVAFFSLYERKLMGLVQGRKGPNKVGVGGVLQPFADAMKLISKNEYAPSKVIKF 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y  SP+  F          P I+N    NL I+F L L S+ VY  I++GW S+S YA 
Sbjct: 75  IYAVSPMISFFISLVFWIMYPVIWNFFSLNLSIVFLLVLFSVSVYGFILSGWFSSSKYAN 134

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +G  R++AQ+ISYEV                        QE                   
Sbjct: 135 IGCARALAQSISYEVGLTLSIIFFCLFFSCISLSEILEVQE-FFFFFPFSFLFVFMWSIF 193

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR PFD AEGE EL  G
Sbjct: 194 FAETNRPPFDLAEGESELKKG 214


>UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Flustrellidra hispida|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Flustrellidra hispida
          Length = 283

 Score =  136 bits (328), Expect = 6e-31
 Identities = 85/200 (42%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V +GV F TLLERK L Y+Q RKGPNK G  G++QP SDAIKLFTKE+T   +++   + 
Sbjct: 10  VALGVGFYTLLERKTLSYMQSRKGPNKPGLSGMVQPLSDAIKLFTKEKTNMFYTSTL-FA 68

Query: 191 FSPVFRFIXXXXXXXXIPYIYNL--ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
             PV  F+          Y  NL  +   LG +  +CL+SL VY +  +GW+SNS YAL+
Sbjct: 69  LVPVL-FMSLIFTTWWF-YFCNLTSVYICLGAILLICLSSLSVYGIFFSGWTSNSKYALM 126

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G +R +AQTISYEV                  Y                           
Sbjct: 127 GSMRGLAQTISYEV-----CMSILILIAILSLYTADFASMTLPVGLHNPLLLAMWTICIP 181

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNRTPFD AEGE ELVSG
Sbjct: 182 AETNRTPFDHAEGESELVSG 201


>UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Heteroconchia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Hiatella arctica
          Length = 314

 Score =  135 bits (327), Expect = 8e-31
 Identities = 74/201 (36%), Positives = 103/201 (51%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +LG LI VAF  ++ERK LG+ Q+R+GPNK    G+ Q  +D +KL  K   +P  S  +
Sbjct: 19  LLGGLISVAFFIVVERKGLGHFQLRQGPNKPSIKGIAQALADGVKLMLKGCFFPGNSEKY 78

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            ++  P   F          P  ++ I +   + +++CL +LGVY V I GWSSNS+YAL
Sbjct: 79  LFFLGPFLMFSFSYGFWLIFPCYHSSIFYESSMAYYMCLVALGVYGVFICGWSSNSSYAL 138

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +R++AQ+ISYEV                    F + +                    
Sbjct: 139 LGAMRALAQSISYEVVLGTLILCPCLYSGGLSVNSFLMTK--GLYGGLSVEIFFLWMAVL 196

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AETNR PFDF EGE ELV+G
Sbjct: 197 LAETNRAPFDFVEGESELVAG 217


>UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Venerupis (Ruditapes) philippinarum|Rep:
           NADH-ubiquinone oxidoreductase chain 1 - Venerupis
           (Ruditapes) philippinarum
          Length = 309

 Score =  134 bits (324), Expect = 2e-30
 Identities = 75/200 (37%), Positives = 102/200 (51%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L +L+ VAF  + ERK LG +Q+R+GPNKVG  GL+Q  +D +KLFTKE   P F++   
Sbjct: 8   LVMLMSVAFFIVTERKGLGMLQLRQGPNKVGLKGLVQFLADGVKLFTKEMIMPLFASEGL 67

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           Y   P+  F          P +++ +   LG+LFFLC++S  VY V + GWS +S Y  L
Sbjct: 68  YTVGPLICFFCAYSLWVLFPMMFSSLKITLGLLFFLCVSSAAVYGVFMVGWSCDSRYGFL 127

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G +R++AQ++SYEV                                              
Sbjct: 128 GAMRAIAQSVSYEV--FLSTCLFCPLILTGSYDLIESRCSPFSSVFIGFEVLVLWVICIL 185

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFDF EGE ELV+G
Sbjct: 186 AETNRPPFDFVEGESELVAG 205


>UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=60; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Neurospora crassa
          Length = 371

 Score =  133 bits (322), Expect = 3e-30
 Identities = 78/199 (39%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           L+ VA++T+ ERK +  +Q R GPN VG++GLLQ F+DA+KL  KE      +N   ++ 
Sbjct: 21  LLAVAYVTVAERKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEYVALTQANMTLFFL 80

Query: 194 SPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 367
            PV   I        IPY  +L+    NLGIL+ L ++SL  Y +++AGWS+NS YA LG
Sbjct: 81  GPVITLIFSLLGYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILLAGWSANSKYAFLG 140

Query: 368 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 547
            LRS AQ ISYE+                        Q                     A
Sbjct: 141 SLRSAAQLISYELVLSSAILLVIMLTGSFNLGVNTESQRAVLFVLPLLPIFIIFFIGSIA 200

Query: 548 ETNRTPFDFAEGERELVSG 604
           ETNR PFD AE E ELVSG
Sbjct: 201 ETNRAPFDLAEAESELVSG 219


>UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Leptotrombidium|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Leptotrombidium pallidum
          Length = 293

 Score =  133 bits (321), Expect = 4e-30
 Identities = 77/201 (38%), Positives = 102/201 (50%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL +L+ V F TL+E ++LG I +R GP +VG IG+ QP SD +KLF K   +P  SN  
Sbjct: 9   ILPILLAVMFFTLMEVQMLGKIHLRLGPTRVGMIGIFQPLSDFLKLFNKSFWFPQKSNLS 68

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y+ SP+                + L      IL F CL+SL V+ ++++GW+S+S Y+L
Sbjct: 69  IYFISPLLCLFVGFIVWHGYGTKFPLTNIKWSILSFFCLSSLLVFYLLMSGWASSSTYSL 128

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG  RS AQTISYEV                    + L +E                   
Sbjct: 129 LGSYRSAAQTISYEV--CLIFIIFSSIFFVKTFSIWELSEETPMLSLIHPILLLIWIFSC 186

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE+NRTPFD  EGE ELVSG
Sbjct: 187 LAESNRTPFDLTEGESELVSG 207


>UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=9; Urochordata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ciona savignyi (Pacific transparent sea
           squirt)
          Length = 344

 Score =  131 bits (316), Expect = 2e-29
 Identities = 81/201 (40%), Positives = 97/201 (48%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL +L+ VA L LLERKVLG  QIRKGPN VG  GL+Q   D  KL  K+         F
Sbjct: 12  ILFLLLMVALLVLLERKVLGLAQIRKGPNIVGIYGLMQTILDGGKLILKKLMVLFNIRKF 71

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +  SP+  F+        IP  + L     GIL  L ++SL VY  + AGW SN+ Y+L
Sbjct: 72  FFLLSPILGFVLSLMNWFFIPTPFILFHSEYGILLTLVISSLLVYTTLWAGWGSNNIYSL 131

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +GG+R VAQ ISYEV                   FF  +Q                    
Sbjct: 132 IGGIRGVAQMISYEVVLGFFIMLLLLLMGSYNWEFFLYFQSSYVFWGGMFMFMVSWIGMM 191

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NR PFD  EGE ELVSG
Sbjct: 192 LAELNRAPFDLIEGESELVSG 212


>UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=6; cellular organisms|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Nitrosospira multiformis (strain ATCC
           25196 / NCIMB 11849)
          Length = 366

 Score =  131 bits (316), Expect = 2e-29
 Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGL------LQPFSDAIKLFTKERTYP 163
           +L +++ VA+LT  ERK++GY+Q+R GPN+V F G+       QP +DA+K   KE   P
Sbjct: 34  VLPLMLAVAYLTFAERKIIGYMQLRVGPNRVTFFGIPWLGGWAQPIADAVKAVMKEIIIP 93

Query: 164 NFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGW 337
           + +N   +  +P+  F         IP+  +++    N G+L+ L +TS+GVY +IIAGW
Sbjct: 94  SGANKVLFVLAPILTFAPALAAWAVIPFSPDVVLADINAGLLYILAMTSMGVYGIIIAGW 153

Query: 338 SSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXX 505
           +SNS YA LG +RS AQ +SYE+                        Q+           
Sbjct: 154 ASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSQSLNLGDIVKGQQGASMLNWYLIP 213

Query: 506 XXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                        AETNR PFD AEGE E+V+G
Sbjct: 214 LFPMFLVYFISGVAETNRAPFDVAEGESEIVAG 246


>UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Chytridiomycota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Spizellomyces punctatus
          Length = 301

 Score =  130 bits (313), Expect = 4e-29
 Identities = 74/204 (36%), Positives = 100/204 (49%), Gaps = 3/204 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L V++ VA +TL ER ++G +Q R GPNKVG++GLLQPF+D IKL  KE   P  S+++
Sbjct: 8   VLCVVLSVALMTLAERNIMGAMQRRIGPNKVGYLGLLQPFADGIKLILKETVLPLESSHW 67

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNL---GILFFLCLTSLGVYIVIIAGWSSNSN 352
            +  +P   F         +P  Y +    L   GIL  + ++ L +Y VI +GW++NS 
Sbjct: 68  LFLGAPFVTFYLALLNWLVLPLDYGVALSELLGGGILILIAISELSIYGVIYSGWAANSK 127

Query: 353 YALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXX 532
           Y  LG LRS AQ ISY V                        Q+                
Sbjct: 128 YPFLGSLRSTAQMISYSVSLSLILLTVIFTLGTVNLLDILAAQQPVSLFYPLLPMAILFM 187

Query: 533 XXXXAETNRTPFDFAEGERELVSG 604
               AETNR PFD  E E ELV+G
Sbjct: 188 ISAVAETNRAPFDLPEAESELVAG 211


>UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H;
           n=313; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Nitrosomonas europaea
          Length = 366

 Score =  128 bits (308), Expect = 2e-28
 Identities = 77/213 (36%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFI------GLLQPFSDAIKLFTKERTYP 163
           ++ +L+ VA+LT  ERK++ Y+Q+R GPN+V F       G  QP +DA+K   KE   P
Sbjct: 34  VIPLLLAVAYLTFAERKIIAYMQVRVGPNRVTFFDIPWLRGWGQPIADAVKAIMKEIIIP 93

Query: 164 NFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGW 337
             +N F +  +PV            +P+   L+    N G+L+ L +TSLGVY VIIAGW
Sbjct: 94  TGANKFLFLLAPVLAIGPALAAWAVVPFSPELVLADINAGLLYILAMTSLGVYGVIIAGW 153

Query: 338 SSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXX 505
           +SNS YA LG +RS AQ +SYE+                        Q+           
Sbjct: 154 ASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSSSLNLGDIVAGQQGGSFLNWYLIP 213

Query: 506 XXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                        AETNR PFD AEGE E+V+G
Sbjct: 214 LFPMFLVYFISGVAETNRAPFDVAEGESEIVAG 246


>UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Sphingobacteriales genera incertae sedis|Rep:
           NADH-quinone oxidoreductase subunit H - Salinibacter
           ruber (strain DSM 13855)
          Length = 345

 Score =  127 bits (307), Expect = 2e-28
 Identities = 75/208 (36%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I  +L+  + L   ER+V  +IQ R GPN+VG +GLLQPF+D +K   KE   P  SN F
Sbjct: 16  INAMLLSASLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDVQPAQSNKF 75

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +  +PV   +        IP+   ++    N+G++  L LTS+ VY V +AGWSSNS +
Sbjct: 76  IHSMAPVVMVVIAMTTASLIPFAEGVVVADLNVGVIMLLALTSISVYGVTLAGWSSNSKF 135

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-----XXXXXXXXXXXX 520
           +LLGGLRS AQ +SYE+                       +Q                  
Sbjct: 136 SLLGGLRSAAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWNAVRNPIGC 195

Query: 521 XXXXXXXXAETNRTPFDFAEGERELVSG 604
                   AETNR PFD  E E ELV+G
Sbjct: 196 LIFIVTAFAETNRAPFDLPEAEEELVAG 223


>UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=7; cellular organisms|Rep: NADH-quinone oxidoreductase
           subunit H 1 - Acidobacteria bacterium (strain Ellin345)
          Length = 426

 Score =  125 bits (301), Expect = 1e-27
 Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2   ILGVL-IGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           I GV  + V  +T LERKVL ++QIR GP +VG  GLLQP +DA+KL  KE   P+ ++ 
Sbjct: 31  IFGVASVAVMLMTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLIKEDIVPDGADK 90

Query: 179 FCYYFSPVFRFIXXXXXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 352
           F ++ +PV   +        IP+   + +   N+G+LF + ++SLGV  V++AGWSSNS 
Sbjct: 91  FLFWMAPVTVMMTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLGVLAVVMAGWSSNSK 150

Query: 353 YALLGGLRSVAQTISYEV 406
           YAL+GGLRS AQ +SYEV
Sbjct: 151 YALMGGLRSAAQMVSYEV 168


>UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Pedinomonas minor|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Pedinomonas minor
          Length = 310

 Score =  124 bits (298), Expect = 3e-27
 Identities = 75/201 (37%), Positives = 96/201 (47%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ VL+ VAFL L+ERKV+ YIQ R+GP  VGF G LQ  +D +KL  K           
Sbjct: 19  LVSVLLSVAFLVLIERKVIAYIQRRRGPVFVGFWGALQSIADGLKLILKTNLSVFGIEKS 78

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YY SP   F         IP  + L   ++ + F L L S+GVY +++AG SS+S +A 
Sbjct: 79  IYYASPFISFFISLLSWVFIPLGFLLQDSDISLFFILALNSIGVYGILLAGLSSSSRWAF 138

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LGGLRS AQ ISYE+                       +QE                   
Sbjct: 139 LGGLRSAAQIISYELSLNICIFSIILCVGGLSIIKVVSFQENILLVFPLLPFILISFIIS 198

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NR PFD  E E ELV+G
Sbjct: 199 LAEINRAPFDLPEAEAELVAG 219


>UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=22; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ascaris suum (Pig roundworm) (Ascaris
           lumbricoides)
          Length = 290

 Score =  124 bits (298), Expect = 3e-27
 Identities = 70/198 (35%), Positives = 96/198 (48%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V+  +AF+TL ER +LG  Q R GPNKV F+G LQ   D +KL  KE+  P  S+   + 
Sbjct: 15  VIQSIAFVTLYERHLLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFI 74

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
             P   FI        +P+ Y+ + F   ILFFLCL    VY  +++G  S S Y ++G 
Sbjct: 75  LVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLCLIGFSVYTTLVSGMVSKSKYGMVGA 134

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R+ +Q++SYE+                  + F+                        AE
Sbjct: 135 IRASSQSVSYEIAFSLYLLAIVMHINMFCFFSFF--------NLSLFIVYLPFLFMVLAE 186

Query: 551 TNRTPFDFAEGERELVSG 604
            NR PFDFAEGE ELVSG
Sbjct: 187 LNRAPFDFAEGESELVSG 204


>UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Armillifer armillatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Armillifer armillatus
          Length = 305

 Score =  121 bits (292), Expect = 1e-26
 Identities = 74/201 (36%), Positives = 102/201 (50%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++GV+ G+AF+TL+ERK+L  +Q R+GPNKVG  G LQPFSDA+KL +K        +  
Sbjct: 13  VMGVM-GLAFVTLVERKILSLVQWREGPNKVGG-GYLQPFSDALKLVSKGWVVLGEGDLG 70

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y                  P  + +      +L F+ + S+ VY ++++GW SNS Y L
Sbjct: 71  GYVMGAWLFIFLMMLLWGMYPTFWGVYSLEWTLLCFILVLSVSVYGLLVSGWMSNSKYGL 130

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LGG+RSVAQT+SYEV                  Y   +  E                   
Sbjct: 131 LGGVRSVAQTVSYEV---SLVLVVMYWVLYMGGYGLEVTMEGVWLVFLNILMFVIMGVVC 187

Query: 542 XAETNRTPFDFAEGERELVSG 604
            +E NR+PFDF+EGE ELVSG
Sbjct: 188 ISELNRSPFDFSEGESELVSG 208


>UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Crassostrea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Crassostrea gigas (Pacific oyster)
           (Crassostrea angulata)
          Length = 340

 Score =  120 bits (290), Expect = 2e-26
 Identities = 70/200 (35%), Positives = 94/200 (47%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           LGVL+ VA+ TL+ERK L  + IR GP+K+ F GL QP SD +KLFTKE   P+ S    
Sbjct: 43  LGVLVSVAYFTLMERKCLSSLGIRLGPDKISFAGLAQPISDGMKLFTKEFVAPSNSAKLG 102

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           ++  P    +         P           ILFFL ++S+  ++ I++GW+S+S YA +
Sbjct: 103 FFLIPCVAMLLCFLGWQIYPCSSTSPSMGNDILFFLVVSSVNAHVAIMSGWTSSSKYASV 162

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           GG+R  AQ ISYE+                  +                           
Sbjct: 163 GGVRGFAQVISYEICLSITLVAVMFFSGSMSFFSLSDSGWSMWWGLYCAPVAALWVVICL 222

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE NR PFD  E E ELVSG
Sbjct: 223 AEANRAPFDLVEAESELVSG 242


>UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=8; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Gyrodactylus salaris (Flatworm)
          Length = 295

 Score =  120 bits (290), Expect = 2e-26
 Identities = 73/200 (36%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +++ VAF  L ERKVLGYIQ+RKGPNK G  GL+Q F+D  KL  K +TY +F     + 
Sbjct: 14  IMVFVAFFILAERKVLGYIQLRKGPNKTGIAGLMQSFADLAKLVLKAKTY-SFQYRSLFS 72

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
              V+  +        I  ++NL  +N    +L F  LTSL  Y ++  GW SN+ Y+L 
Sbjct: 73  LFGVYLIVLVSMLYCNIYALFNL-GYNSPYLLLMFFLLTSLSSYSILSVGWGSNNKYSLY 131

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G LRS    +SYE+                  Y  Y                        
Sbjct: 132 GSLRSSFGAVSYEMSFMCFLLTIGSVLGFYSLYDSYFSYSVYSSILLLWPIYLIFILCSL 191

Query: 545 AETNRTPFDFAEGERELVSG 604
            ETNR PFDFAE E +LVSG
Sbjct: 192 CETNRVPFDFAESESDLVSG 211


>UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Trichinella spiralis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Trichinella spiralis (Trichina
           worm)
          Length = 299

 Score =  120 bits (288), Expect = 4e-26
 Identities = 71/205 (34%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ +L+ +AF+TL+ER+ +G  Q R GPNKV   GL+QP  D +KL  K     N  N  
Sbjct: 12  IITILLSIAFVTLMERQYIGISQRRLGPNKVSITGLMQPILDGLKLTLKSTKKTNKLNPT 71

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            Y   P+            +P +YN I F + +LF + L  +  + ++++GW SNS YA 
Sbjct: 72  FYLLMPIMNLTLFTLFWWGLPLLYNPISFQVNLLFTITLMGIMSFGIVLSGWVSNSKYAT 131

Query: 362 LGGLRSVAQTISYEV----RXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXX 529
            G LRS++Q+ISYEV                        FY ++                
Sbjct: 132 YGSLRSMSQSISYEVCLSTTLLMIMMLKDSYNLATTKTGFYYFE-----PTITLALTIPA 186

Query: 530 XXXXXAETNRTPFDFAEGERELVSG 604
                AETNR+PFD AE E ELVSG
Sbjct: 187 TIMILAETNRSPFDLAEAESELVSG 211


>UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Metaseiulus occidentalis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Metaseiulus occidentalis
           (western predatory mite)
          Length = 270

 Score =  119 bits (287), Expect = 5e-26
 Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL+ +AFLTL+ERK+LGY+QIRKGPNK+  +GL+QP  D +KLF KE  Y    N F + 
Sbjct: 12  VLLSIAFLTLMERKILGYMQIRKGPNKMSVLGLVQPVLDGMKLFMKESFYIKSVNKFMFN 71

Query: 191 FSPVFRFIXXXXXXXXIPY-IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 367
             P   F+          +  Y+++ ++L  +FF+ ++ L V+ V+   W+SNS YALLG
Sbjct: 72  VFPFLFFMLMMNCWFMYMFNKYHIVSYSL--VFFILISGLSVHSVLGVSWASNSKYALLG 129

Query: 368 GLRSVAQTISYEV 406
             R V+QT+SYEV
Sbjct: 130 AYRLVSQTVSYEV 142


>UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Rubrobacter xylanophilus DSM 9941|Rep: NADH-quinone
           oxidoreductase subunit H - Rubrobacter xylanophilus
           (strain DSM 9941 / NBRC 16129)
          Length = 331

 Score =  119 bits (286), Expect = 7e-26
 Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL   A LTL ERKV  YIQ+R GPN+VG  GLLQP +D +KLF KE   P  ++ + + 
Sbjct: 24  VLNIAAVLTLAERKVSAYIQLRYGPNRVGPRGLLQPAADVVKLFIKENVSPGRADRWVFL 83

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +P+  F+        IP+   ++    N+G+++F  +TS+G   VI+AG+ S SN++LL
Sbjct: 84  AAPIAMFLPAAAVWLVIPFGPGMVVADLNIGLVYFFAITSIGALGVIMAGYGSRSNFSLL 143

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE---XXXXXXXXXXXXXXXXX 535
           G LR   Q ISYEV                       YQ                     
Sbjct: 144 GALRGAGQMISYEVPLILSLLGVAMLTGSLSMVDIVEYQAGGFWNWIIWPQLPMFLAFFV 203

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AE  R PFD  EGE E+V G
Sbjct: 204 SGLAEVKRIPFDLPEGESEIVGG 226


>UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=5; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Dehalococcoides sp. (strain CBDB1)
          Length = 353

 Score =  119 bits (286), Expect = 7e-26
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V++ V     LER+++G  Q+R GPN+ G  GLLQP +DAIK+  KE   P+ ++   ++
Sbjct: 19  VIVSVLIFIWLERRLIGRFQLRPGPNRAGPFGLLQPIADAIKVLIKEDIIPSEADKGVFW 78

Query: 191 FSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +P+  F+        IP+     L+  N+GIL+ L ++S+ V  + +AGWSSN+ Y+LL
Sbjct: 79  LAPLVAFVPVMLMFAAIPFADGVMLVDLNIGILYILAVSSVTVIGIFMAGWSSNNKYSLL 138

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G +R++AQ +SYE+                        Q+                    
Sbjct: 139 GAMRTIAQEVSYEIPLVLSILGVVMLTGSLSMNEIVKAQD-VPFILLQPLGFFVYLSAAM 197

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE NRTPFD  E E E+++G
Sbjct: 198 AEVNRTPFDLLEAESEIIAG 217


>UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H;
           n=63; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Herminiimonas arsenicoxydans
          Length = 357

 Score =  118 bits (284), Expect = 1e-25
 Identities = 61/137 (44%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L ++  VA+LTL ERKV+G++ +R GPN+ G  GLLQP +DA+KL  KE   P  S+  
Sbjct: 33  VLPLMGCVAYLTLWERKVIGWMHVRHGPNRTGPAGLLQPIADALKLLLKEIVVPAKSSKA 92

Query: 182 CYYFSPVFRFIXXXXXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +  +P+   +        IP+     L   N G+LF + +TSL VY VI+AGW+SNS Y
Sbjct: 93  LFVIAPIMTIMPALAAWAVIPFGPEAALANVNAGLLFVMAITSLEVYGVIVAGWASNSKY 152

Query: 356 ALLGGLRSVAQTISYEV 406
           A LG +R+ AQ ISYE+
Sbjct: 153 AFLGAMRASAQMISYEI 169


>UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=5; Aleyrodinae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Vasdavidius concursus
          Length = 307

 Score =  117 bits (282), Expect = 2e-25
 Identities = 66/198 (33%), Positives = 95/198 (47%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ +AF TLLERK++ + Q R GP KV F+G++QP SDA+KL +KE      SN   + 
Sbjct: 15  ILMEIAFFTLLERKMISFSQNRTGPMKVSFLGIIQPISDAMKLISKETKLNLKSNSMLFI 74

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
             P+   I        +P  Y      + +LF L   +     ++I  WSSNSNYA++  
Sbjct: 75  LCPMINLITSILIWTIMPSEYMFNFMKMSLLFMLAAMATNTVSIMIMSWSSNSNYAMISM 134

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R++AQ ISYE+                     Y                        AE
Sbjct: 135 IRTIAQMISYEINIILIVLTFMVIMEKMNLSSCY---NNIMLSMYMPYMLIMWLITIMAE 191

Query: 551 TNRTPFDFAEGERELVSG 604
           T+R+PFDF+E E EL+SG
Sbjct: 192 TSRSPFDFSESESELISG 209


>UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=24; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Caenorhabditis elegans
          Length = 291

 Score =  117 bits (282), Expect = 2e-25
 Identities = 67/198 (33%), Positives = 94/198 (47%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           ++  +AF+TL ER +LG  Q R GP KV F+GL Q   D +KL  KE+  P  S+   + 
Sbjct: 15  IVQSIAFITLYERHLLGSSQNRLGPTKVTFMGLAQALLDGVKLLKKEQMTPLNSSEVSFL 74

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
             P   F+        +PY ++ I F   +LFFLCL    VY  +I+G  S S Y ++G 
Sbjct: 75  LVPGISFVVMYLEWFTLPYFFDFISFEYSVLFFLCLIGFSVYTTLISGIVSKSKYGMIGA 134

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R+ +Q+ISYE+                      ++                      AE
Sbjct: 135 IRASSQSISYEIAFSLYVLCIIIHNN--------VFNFVSKFNLSLLIIYIPFLIMVIAE 186

Query: 551 TNRTPFDFAEGERELVSG 604
            NR PFDF+EGERELV G
Sbjct: 187 LNRAPFDFSEGERELVRG 204


>UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Siphonodentalium lobatum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Siphonodentalium lobatum
          Length = 295

 Score =  117 bits (281), Expect = 3e-25
 Identities = 74/198 (37%), Positives = 100/198 (50%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL+ V+F T++ERK L Y Q RKGPNKV F+GLLQ  +D +KL +K    P  SN+  + 
Sbjct: 16  VLLTVSFYTIVERKCLSYAQSRKGPNKVVFLGLLQAVADGVKLLSKSMNEPFKSNFVYFT 75

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +P+            +P +         IL  LCL  + VY +I +GW S S+Y+++G 
Sbjct: 76  GAPMVMLGISLTCWYFLPGLGFKSAVG-PILLVLCLFGVNVYCLIFSGWCSYSSYSMIGC 134

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           +R+VAQ++SYEV                    F+L                       AE
Sbjct: 135 VRAVAQSVSYEV-----CSFFSYCAQQLLEVTFFL-GSSTSFFFSFLFIVILWMFVCMAE 188

Query: 551 TNRTPFDFAEGERELVSG 604
           TNR PFDFAEGE ELVSG
Sbjct: 189 TNRAPFDFAEGESELVSG 206


>UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=78; Braconidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Cotesia acuminata
          Length = 218

 Score =  115 bits (276), Expect = 1e-24
 Identities = 58/158 (36%), Positives = 83/158 (52%)
 Frame = +2

Query: 131 IKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLG 310
           IKL  KE  +P  S+++ Y  SP+  FI         P+  NL+ F   +L+FLC+ SLG
Sbjct: 1   IKLLNKEYFFPMKSSFYLYIMSPMMMFILIMMTWMIYPFYSNLLFFENNMLYFLCMMSLG 60

Query: 311 VYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXX 490
           +Y +I+AGWSSNS+++++G +RS+AQ+ISYEV                  +    + +  
Sbjct: 61  IYSLILAGWSSNSSFSMIGSIRSIAQSISYEVVFSIIILIMMTNINSMNLFNLIFFNKFN 120

Query: 491 XXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                             AE NRTPFD +EGE ELVSG
Sbjct: 121 NFSLIYFPLMLIILFTMLAEINRTPFDLSEGESELVSG 158


>UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H;
           n=194; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Caulobacter crescentus
           (Caulobacter vibrioides)
          Length = 356

 Score =  114 bits (275), Expect = 2e-24
 Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ VL+ +AFL L +RK+   +Q+RKGPN VG  GLLQ F+D  K   KE   P  ++  
Sbjct: 24  VIWVLLSLAFLLLADRKIWAGVQMRKGPNVVGPFGLLQSFADFFKFVLKEIVIPAGADKV 83

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +  +P+   I        +P+    +  NL  GIL+ L ++SLGVY +I+ GW+SNS Y
Sbjct: 84  VFILAPLISLILAFVGWAVVPFAPGWVVSNLNVGILYLLAMSSLGVYGIIMGGWASNSKY 143

Query: 356 ALLGGLRSVAQTISYEV 406
             LG LRS AQ +SYEV
Sbjct: 144 PFLGALRSAAQMVSYEV 160



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFD  E E ELV+G
Sbjct: 221 AETNRPPFDLPEAESELVAG 240


>UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi
           (class)|Rep: NADH dehydrogenase - Roseiflexus sp. RS-1
          Length = 391

 Score =  114 bits (274), Expect = 2e-24
 Identities = 71/203 (34%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
 Frame = +2

Query: 26  AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 205
           A+ TL ER+ L  +Q R GPN+ G  G LQP +DA+KLF KE   P  ++ + Y  SP F
Sbjct: 25  AYFTLFERRTLARLQNRVGPNRAGPGGFLQPIADAVKLFFKEDVTPLLADRWVYLVSPAF 84

Query: 206 RFIXXXXXXXXIPY----------IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
             I        IP              L   N+G+L+ L +TS+GVY + IAGW+SN+ Y
Sbjct: 85  ALIPAIIIWATIPVGMWPDGQGGNWLQLAEINVGVLYLLAVTSVGVYGIAIAGWASNNKY 144

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           ++LGG+R+ AQ ISYE+                        Q                  
Sbjct: 145 SMLGGIRASAQVISYELALGLTVLGAVMQTQSFSTAEIVERQMQMWNIVPQFLGFVVFII 204

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AE  R PFD  E E+ELV G
Sbjct: 205 AATAEVVRAPFDLVEAEQELVGG 227


>UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H;
           n=12; Firmicutes|Rep: NADH-quinone oxidoreductase
           subunit H - Geobacillus kaustophilus
          Length = 333

 Score =  114 bits (274), Expect = 2e-24
 Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNYFCY 187
           VL  V +  L ERKV+G++Q R GPN+VG   GLLQ  +D +KL  KE T P  ++   Y
Sbjct: 29  VLAFVTYGILAERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDTIPKAADRPLY 88

Query: 188 YFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
             +P+  F+        +P+   +      +G+L+++ ++ L    V+  GW+SN+ YAL
Sbjct: 89  VLAPIIAFVPSFMVLAVLPFTDAFRFADIGVGLLYYIAVSGLTTVGVVAGGWASNNKYAL 148

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LGG+R+ AQ ISYE+                        Q+                   
Sbjct: 149 LGGMRAAAQMISYEIPLVMSALGVVLLAGSMNLVDIVAAQKDVWFIFAQPLAFLIFLIAA 208

Query: 542 XAETNRTPFDFAEGERELVSG 604
            AE NRTPFD  E E ELV+G
Sbjct: 209 VAELNRTPFDLPEAESELVAG 229


>UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Saccharomycetales|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Pichia canadensis (Yeast)
           (Hansenula wingei)
          Length = 351

 Score =  114 bits (274), Expect = 2e-24
 Identities = 69/200 (34%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ VA+LT+ ERK LGY+Q R GPN VG+ G L   +DA+KL  KE      S+     
Sbjct: 16  ILLSVAYLTVAERKTLGYMQRRVGPNIVGYYGQLMAIADALKLLLKEIIIVRESDKILII 75

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            SP+            IP+   +     N  +L+ L + S+GV+  ++ GWSSNS + LL
Sbjct: 76  ISPIIALCFALLSWAVIPFSPGIAIGDMNYSLLYILVIGSIGVFGTLLVGWSSNSKFTLL 135

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
             +RS AQ ISYE+                    F   Q+                    
Sbjct: 136 ASIRSTAQLISYELILTTNIIICILLNNTLNLNSFIDNQQTIWLILPLLPIGIIHYIARI 195

Query: 545 AETNRTPFDFAEGERELVSG 604
           AET+R PFD  E E ELVSG
Sbjct: 196 AETSRPPFDNVEAESELVSG 215


>UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H;
           n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Deinococcus radiodurans
          Length = 397

 Score =  113 bits (273), Expect = 3e-24
 Identities = 76/216 (35%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L +L   A++TL+ER++LG IQ+R GPN+VG +GLLQP +DAIK   KE      ++   
Sbjct: 20  LALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLV 79

Query: 185 YYFSPVFRFIXXXXXXXXI------------PYIYNLICFNLGILFFLCLTSLGVYIVII 328
           Y  +P+            I            P++YNL   + GIL  L LTS+GVY + +
Sbjct: 80  YTLAPILAIGMALTAFGGIPAGPPGSLFGTDPWVYNL---DAGILALLALTSMGVYGIFL 136

Query: 329 AGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXX 496
            GW+S S Y +LG LRS AQ ISYE+                       +Q         
Sbjct: 137 GGWASGSKYPMLGSLRSSAQMISYELGMGLSVLGLLMLVGSTNFLDIVEWQAGPRGHGWL 196

Query: 497 XXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                           AE NRTPFD  E E+ELV+G
Sbjct: 197 ILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAG 232


>UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n=2;
           unknown|Rep: UPI00015BD35D UniRef100 entry - unknown
          Length = 348

 Score =  113 bits (271), Expect = 5e-24
 Identities = 74/215 (34%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
 Frame = +2

Query: 2   ILGVLIGV-AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           IL +++G+ A+LTL+ERKV  +IQ R GP  VG+ GLLQP +D IKL TKE   P+ +N 
Sbjct: 17  ILAIILGIGAYLTLVERKVAAHIQRRPGPMVVGWHGLLQPLADGIKLLTKEDILPSSANQ 76

Query: 179 FCYYFSPVFRFIXXXXXXXXIPYIYNLICF-----------NLGILFFLCLTSLGVYIVI 325
             Y  + +   +        +P+   +  F           N+GI+      SL VY V 
Sbjct: 77  VLYNLAIIMALVPASLVFAVVPFGPEIHVFGYDIKPILTDVNIGIIMAFAFGSLAVYGVA 136

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQ--EXXXXX 499
           ++GW+SNS YAL+G LR     ISYEV                  Y   + Q  +     
Sbjct: 137 LSGWASNSKYALIGALRKAGIIISYEVVITFAALGPIMLAKSLSTYDIVMAQIHQKVWYI 196

Query: 500 XXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                          AET R PFD  E E ELV+G
Sbjct: 197 FLQPISFVVFVFALLAETGRVPFDIQEAEAELVTG 231


>UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=5; Proteobacteria|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Syntrophobacter fumaroxidans (strain DSM
           10017 / MPOB)
          Length = 331

 Score =  112 bits (270), Expect = 6e-24
 Identities = 73/213 (34%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
 Frame = +2

Query: 2   ILGVLIGVA-FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           +L VL+ VA +L  LERK L  +QIR GPN+ G  GLLQP +D +K+  KE T P  +  
Sbjct: 18  VLAVLLLVAAYLVWLERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTVPEGAER 77

Query: 179 FCYYFSPVFRFIXXXXXXXXIPYIYNLICF-----------NLGILFFLCLTSLGVYIVI 325
             +  +P             IP+  ++  +           N+G+L+F  L+SLGVY V 
Sbjct: 78  TIFMLAPAVVAATALLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSLGVYGVA 137

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXX 505
           + GW+SNS Y+LLGG+R  AQ ISYE+                        QE       
Sbjct: 138 LGGWASNSKYSLLGGIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEKYPFILT 197

Query: 506 XXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                        AE  R PFD  E E EL +G
Sbjct: 198 QPVAFAIFVISAMAEIKRIPFDLPEAENELGAG 230


>UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
           oxidoreductase subunit H 1 - Solibacter usitatus (strain
           Ellin6076)
          Length = 397

 Score =  111 bits (268), Expect = 1e-23
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
 Frame = +2

Query: 2   ILGVLIG-VAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           I GVL+  +A+L  +ERKV+ +IQ+R GP +VG  GLLQP +D IKL TKE   P + N 
Sbjct: 18  IFGVLMTTLAYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKEDLVPPYVNK 77

Query: 179 FCYYFSPVFRFIXXXXXXXXIPY-----------IYNLICFNLGILFFLCLTSLGVYIVI 325
             Y  +P             IP+              +   N+G+LF L ++S+GVY + 
Sbjct: 78  PLYLAAPFLAITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVSSMGVYGIA 137

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEV 406
           +AGW+SN+ Y+L+GGLRS AQ ISYE+
Sbjct: 138 LAGWASNNKYSLIGGLRSSAQMISYEL 164



 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFD  E E ELV+G
Sbjct: 218 AETNRVPFDLPEAENELVAG 237


>UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=4; Leptospira|Rep: NADH-quinone oxidoreductase subunit
           H - Leptospira interrogans
          Length = 346

 Score =  111 bits (266), Expect = 2e-23
 Identities = 78/219 (35%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           ++   A+ TL ERKV G+IQ RKGPN+ GF GLLQP +D IK  TKE  +P   N   Y 
Sbjct: 20  LITACAYYTLAERKVAGFIQDRKGPNRAGFWGLLQPLADGIKFLTKEEVFPVQVNKVMYL 79

Query: 191 FSPVFRFIXXXXXXXXIPY-----------------IYNLICFN--LGILFFLCLTSLGV 313
            +P             +P                    +L   N   GILF   ++SL V
Sbjct: 80  IAPAISMTCAIMAWSVVPLGGQIPLPSWLQEKTGLTFLDLQIANPDTGILFLFAISSLAV 139

Query: 314 YIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE--X 487
           Y +IIAGW+SN+ Y+LLG +RS AQ ISYE+                        Q    
Sbjct: 140 YGIIIAGWASNNKYSLLGAVRSTAQMISYELPLGMSVVSIVILSGSLRLTDISASQVGLW 199

Query: 488 XXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                              AETNR PFD AE E ELV G
Sbjct: 200 NIFKLPGFIAFCLFVVAMFAETNRLPFDLAEAESELVVG 238


>UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H;
           n=10; Bacillus cereus group|Rep: NADH-quinone
           oxidoreductase subunit H - Bacillus anthracis
          Length = 333

 Score =  110 bits (265), Expect = 3e-23
 Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNY 178
           +  VL  V +  L ERKV+G++Q R GPN+VG   GLLQ  +D +KL  KE + P  ++ 
Sbjct: 26  LFAVLGFVTYGILAERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADK 85

Query: 179 FCYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 352
             +  +PV  F         IP+   +      +G+L+++ ++ +    V+  GW+SN+ 
Sbjct: 86  PLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNK 145

Query: 353 YALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXX 532
           Y+LLGG+R+ AQ ISYE+                        QE                
Sbjct: 146 YSLLGGMRAAAQMISYEIPLVMSVIGIVLLAGSLNLNEIVAAQENVWYIFVQPIGFVVFL 205

Query: 533 XXXXAETNRTPFDFAEGERELVSG 604
               AE NRTPFD  E E ELVSG
Sbjct: 206 IAAVAELNRTPFDLPEAESELVSG 229


>UniRef50_Q8WAI8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Alboglossiphonia heteroclita|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Alboglossiphonia heteroclita
          Length = 199

 Score =  107 bits (257), Expect = 2e-22
 Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L  L+ +AF TLLERK+LGY QIRKGPNKV FIGL QP +DA+KLF KE+     +N  
Sbjct: 17  VLMALMAMAFYTLLERKLLGYFQIRKGPNKVIFIGLPQPLADAMKLFLKEQMIQINANLS 76

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAG--------- 334
            +  +P+             P+         GI++FLC++++ VY   IAG         
Sbjct: 77  LFIGAPMMSLFLALMLWCIYPHQNTSFWLQYGIMYFLCISAMNVYATFIAGSYEVSMSMI 136

Query: 335 -----------WSSNSNYALLGGLRSVAQTI 394
                      WSSNS YALLG  R VAQT+
Sbjct: 137 LLSALILSTFMWSSNSKYALLGAYRGVAQTM 167


>UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H;
           n=74; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Psychrobacter arcticum
          Length = 347

 Score =  107 bits (257), Expect = 2e-22
 Identities = 68/202 (33%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L V+I  A + + ER++L   Q R GPN+VG  G LQ  +D +K+F KE   PNF++ F 
Sbjct: 37  LVVVIVAAMMIIYERRMLALWQDRYGPNRVGPFGSLQLVADMLKIFFKEDWTPNFTDKFM 96

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNL--ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 358
           +  +P             IP    L    +++GILFF  +  + VY V+  GW+S + ++
Sbjct: 97  FTLAPAVAMFTALASFAIIPISPTLGVADWDIGILFFFAMAGIAVYAVLFGGWASANKFS 156

Query: 359 LLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXX 538
           LLGGLRS AQTISYEV                        Q                   
Sbjct: 157 LLGGLRSAAQTISYEVFLGLSLMGVVALTGSFNLRAIVEAQADGWYIIPQFFGFLTFVVA 216

Query: 539 XXAETNRTPFDFAEGERELVSG 604
             A T+R PFD  E E+EL  G
Sbjct: 217 GVAVTHRHPFDQPEAEQELAEG 238


>UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=302; Platyhelminthes|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Taenia asiatica (Asian
           tapeworm)
          Length = 303

 Score =  107 bits (256), Expect = 3e-22
 Identities = 69/201 (34%), Positives = 91/201 (45%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L  L+ +AF  L ERK+LGY Q RKGPNKVG IGLLQ FSD +KL  K + Y   S  +
Sbjct: 13  LLVSLLIIAFFILGERKILGYSQFRKGPNKVGIIGLLQSFSDLLKLIVKFKNYGFQSRSW 72

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
              F  V                Y+    +L +L+FL +TS   Y ++  GW S ++Y+ 
Sbjct: 73  VGLFGVVLLVGLVIYYSFVYGGYYSYSFNSLSLLWFLVITSFCSYSILCTGWGSYNSYSF 132

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           L  +R    +IS+E                     F+L                      
Sbjct: 133 LSSIRCAFGSISFEACFMCIIIFSALCYCSYSLVDFFL--SGWLSVVIFPCLLILYIICI 190

Query: 542 XAETNRTPFDFAEGERELVSG 604
             ETNRTPFD+ E E ELVSG
Sbjct: 191 LCETNRTPFDYGEAESELVSG 211


>UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Halocynthia roretzi|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Halocynthia roretzi (Sea
           squirt)
          Length = 298

 Score =  106 bits (255), Expect = 4e-22
 Identities = 72/203 (35%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L +L+ VAFL LLERK+ G  Q+R GPN VG  GL+Q   D +KL  K     +  N+F
Sbjct: 9   VLFLLLLVAFLVLLERKIFGLTQVRLGPNVVGASGLVQTIGDGVKLLLKRFFLFSKLNFF 68

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +   P+  FI        +P+  +L      +LF   ++ + VY+V+ AGW S+S + L
Sbjct: 69  -FRVCPMVGFILSIVHWLVLPFPGSLWHMGWSVLFTFAVSGVLVYVVLWAGWGSDSVFGL 127

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE--XXXXXXXXXXXXXXXXX 535
           LG +R V+Q ISYEV                  Y+     E                   
Sbjct: 128 LGSVRGVSQMISYEV---VFMFFVLLFSIEVWSYWLGGVCEGTGVFGIYFKFLLVLVWGV 184

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AE NRTPFD  EGE ELVSG
Sbjct: 185 IVLAELNRTPFDLVEGESELVSG 207


>UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
          Length = 451

 Score =  105 bits (251), Expect = 1e-21
 Identities = 66/209 (31%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +++   F+   ER+V+  +Q R GPN+VG  GLLQ  +D +KL  KE   P  ++   + 
Sbjct: 42  LVLATLFMIWAERRVVARMQQRIGPNRVGPFGLLQSLADGLKLALKEDIVPTLADKAVFI 101

Query: 191 FSPVFRFIXXXXXXXXIPY-----------IYNLICFNLGILFFLCLTSLGVYIVIIAGW 337
            +PV            IP+              L    + +LF L ++SLGVY +++AGW
Sbjct: 102 LAPVISATPAFLAFAVIPFGPTVSIAGHHTNLQLTDLPVAVLFVLAMSSLGVYGIVLAGW 161

Query: 338 SSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXX 517
           SS S Y LLGG+RS AQ +SYE+                        Q            
Sbjct: 162 SSGSPYPLLGGVRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQAHRWGILWAGVS 221

Query: 518 XXXXXXXXXAETNRTPFDFAEGERELVSG 604
                     ETNR PFD  EGE E+V G
Sbjct: 222 FAVYAIAMVGETNRAPFDLPEGETEIVGG 250


>UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Herpetosiphon aurantiacus ATCC
           23779|Rep: Respiratory-chain NADH dehydrogenase, subunit
           1 - Herpetosiphon aurantiacus ATCC 23779
          Length = 413

 Score =  104 bits (250), Expect = 2e-21
 Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++G  +G+ FLT  ER+ + Y+Q R+GPN+VG  GLLQP S+AIK  TKE   P  ++  
Sbjct: 28  LVGGSVGMMFLTWYERRAISYMQDRRGPNRVGPQGLLQPISEAIKTMTKEDATPREADRI 87

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNL-ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 358
            ++ +PV            IP+     +  N  +LF +    L    +++AGW SN+ +A
Sbjct: 88  VHFLAPVVMLGATVLSFAVIPWGRMFPVDLNAAVLFVIATGGLHSIGMMMAGWGSNNKFA 147

Query: 359 LLGGLRSVAQTISYEV 406
           LLGG+R VAQ ISYE+
Sbjct: 148 LLGGMRGVAQLISYEI 163


>UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H;
           n=6; Rhodobacterales|Rep: NADH-quinone oxidoreductase
           subunit H - Rhodobacter capsulatus (Rhodopseudomonas
           capsulata)
          Length = 345

 Score =  104 bits (250), Expect = 2e-21
 Identities = 69/205 (33%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V+IG+  L   +RK+   +Q+RKGPN VG  GLLQ  +DA K   KE   P   +   Y+
Sbjct: 26  VMIGLLLLVWGDRKIWAAVQMRKGPNVVGAFGLLQSVADAAKYVFKEIVVPAGVDKPVYF 85

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +P+   +        +P+    +    N+ +LF   ++SL VY VI+ GW+SNS Y  L
Sbjct: 86  LAPMLSLVLALLAWVVVPFNEGWVMADINVAVLFVFAVSSLEVYGVIMGGWASNSKYPFL 145

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-----XXXXXXXXXXXXXXX 529
           G LRS AQ ISYEV                        Q                     
Sbjct: 146 GSLRSAAQMISYEVSMGLIIVGVIISTGSMNLSAIVEAQRGDFGLLNWYWLPHLPMVALF 205

Query: 530 XXXXXAETNRTPFDFAEGERELVSG 604
                AETNR PFD  E E ELV+G
Sbjct: 206 FISALAETNRPPFDLPEAESELVAG 230


>UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/I;
           n=65; Bacteria|Rep: NADH-quinone oxidoreductase subunits
           H/I - Nocardia farcinica
          Length = 597

 Score =  104 bits (249), Expect = 2e-21
 Identities = 68/200 (34%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
 Frame = +2

Query: 38  LLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 217
           L ERKV+  +Q+R GPN+VG  G LQ  +D +K+  KE   P   +   Y  +PV   I 
Sbjct: 35  LAERKVVARMQMRVGPNRVGPFGSLQSIADGVKMAFKEDLVPAIVDKPIYLLAPVVSVIP 94

Query: 218 XXXXXXXIPY-----------IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
                  IP               L    +G+L+ L +TS+GVY +++AGW+S S Y LL
Sbjct: 95  AFMAFAVIPLGGEVSVAGNTTALQLTDMPVGVLYILAITSIGVYGIVLAGWASGSTYPLL 154

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           GGLRS AQ ISYE+                        Q                     
Sbjct: 155 GGLRSTAQVISYEIAMALCFAAVFLHAGTMATSGIVGAQHPTWFVFLLLPSFLIYCVSMV 214

Query: 545 AETNRTPFDFAEGERELVSG 604
            ETNR PFD  E E ELV G
Sbjct: 215 GETNRAPFDLPEAEGELVGG 234


>UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
           oxidoreductase subunit H 2 - Symbiobacterium
           thermophilum
          Length = 394

 Score =  104 bits (249), Expect = 2e-21
 Identities = 66/203 (32%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           LI      +LERK+  ++Q R GP +VG  G +QP +D IKL+ KE   PN  + + Y  
Sbjct: 30  LINFYLCLMLERKLSAWMQNRVGPWRVGLWGWIQPVADLIKLWVKEYIRPNNVDKWLYLI 89

Query: 194 SPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 367
           +P   F+        +P+   LI   F +GI+F   +    V    +AGW SN+ Y++LG
Sbjct: 90  APFIGFVSANLVWLIVPFGDKLIATDFEIGIIFIAAVMGYDVIATFMAGWGSNNKYSMLG 149

Query: 368 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXXXXXXXXXXXX 535
            +R  AQ ISYEV                      L Q+                     
Sbjct: 150 AMRGAAQLISYEVTMVMAVIGVVMMAGSLRLSDIVLAQQQRGFLGWFLFPQIIGFIVYLI 209

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AE NR PFD AE E+ELV+G
Sbjct: 210 ASLAELNRAPFDLAEAEQELVAG 232


>UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Lingula anatina|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Lingula unguis
          Length = 318

 Score =  103 bits (248), Expect = 3e-21
 Identities = 63/200 (31%), Positives = 89/200 (44%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           + +L+ +AF +L ER +L  +  R+ P  VG  G+LQP +D +KL+ K+      SN+  
Sbjct: 22  VNLLVIIAFYSLSERAILSLVAGRQSPGIVGLRGVLQPMADGMKLYMKDMIRLAQSNHLA 81

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           Y   P              P+ +      +  L FLC  SL    ++IAGW+SNS Y+L+
Sbjct: 82  YVLCPSVSLGLSFAAWSVFPF-WGTYSLEVSALLFLCFISLSAIPIMIAGWASNSKYSLM 140

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
             +RS+AQ ISYEV                         +                    
Sbjct: 141 ASVRSLAQAISYEVVLGLLLVFPLLFTHSLEMSSVAAPTQSIWVALAFPPLFGMWLACIL 200

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR+PFD  E E ELVSG
Sbjct: 201 AETNRSPFDLVEAESELVSG 220


>UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H;
           n=4; Bacteroidetes|Rep: NADH-quinone oxidoreductase
           subunit H - Flavobacterium psychrophilum (strain
           JIP02/86 / ATCC 49511)
          Length = 343

 Score =  103 bits (248), Expect = 3e-21
 Identities = 66/204 (32%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
 Frame = +2

Query: 29  FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 208
           + T  ERKV  ++Q R GPN+ G+ GLLQP +D +KLF+KE   PN  N F +   P   
Sbjct: 26  YSTWAERKVAAFLQDRVGPNRAGWGGLLQPLADGLKLFSKEEFEPNTPNKFLFVVGPAIA 85

Query: 209 FIXXXXXXXXIPYIYNLICFNLGI-----------LFFLCLTSLGVYIVIIAGWSSNSNY 355
                     IP+   L  F   I           L+   + S+GVY ++I GW+SN+ +
Sbjct: 86  MSTALMTSAVIPWGDKLHLFGRDILLQATDIDNALLYIFAVVSVGVYGIMIGGWASNNKF 145

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXX 532
           +L+G +R+ +Q +SYEV                        Q                  
Sbjct: 146 SLMGAVRAASQMVSYEVAMGLSMIALLMMTGTLSLKEISAQQSGMNWNVFYQPVSFLIFL 205

Query: 533 XXXXAETNRTPFDFAEGERELVSG 604
               AETNRTPFD AE E EL+ G
Sbjct: 206 ICAFAETNRTPFDLAECESELIGG 229


>UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Pseudococcidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 306

 Score =  102 bits (245), Expect = 7e-21
 Identities = 64/198 (32%), Positives = 84/198 (42%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           +I V F  LLERKVLGY+  R GPNK+ F GL Q   D +KL  KE ++    N+F Y F
Sbjct: 13  MISVGFFILLERKVLGYLNNRLGPNKILFKGLFQFLMDLVKLIFKENSFMILMNFFMYNF 72

Query: 194 SPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 373
              F FI        +PY+ NLI     IL  L +    + I++   WS NS Y+ +  +
Sbjct: 73  MIFFFFIISFFIWLILPYLINLINLGFMILIMLMIMVNKILILMNLIWSINSIYSTISLI 132

Query: 374 RSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAET 553
           R   Q  S+E+                                               E 
Sbjct: 133 RLFIQNFSFEILFMMILFFYMFLYNNLNMLMIMKMVYLNKMIYFSLLIFYFWLISIMVEL 192

Query: 554 NRTPFDFAEGERELVSGI 607
           NR PFDF E E EL+SG+
Sbjct: 193 NRIPFDFLESESELISGM 210


>UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Xiphinema americanum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Xiphinema americanum
          Length = 289

 Score =  101 bits (243), Expect = 1e-20
 Identities = 70/202 (34%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ILG+ + VAF TLLERK+LG+ QIR GPNK+ F GLLQP  D +KL TK    P  +   
Sbjct: 13  ILGLGL-VAFFTLLERKLLGFSQIRVGPNKLAFSGLLQPVMDGLKLLTKNMYMPVITQ-M 70

Query: 182 CYYFSPVFRF-IXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 358
             +  P+  F +        +P+  N +     +L FL L     Y V+I GW   S ++
Sbjct: 71  LLFIGPIISFMVFMIFWVLVLPWNGNFMFRCSALLMFLML-GFSAYSVVIMGWGITSMFS 129

Query: 359 LLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXX 538
            LG LR++ Q++S+EV                    F    E                  
Sbjct: 130 KLGSLRAMLQSLSFEVSLILAFFMTLIHMNSVNLSNFLTCFE------PSITWVFMWIIL 183

Query: 539 XXAETNRTPFDFAEGERELVSG 604
              E+NR PFD  EGE EL+SG
Sbjct: 184 CLMESNRAPFDLLEGESELISG 205


>UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=4; Proteobacteria|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Rhizobium meliloti (Sinorhizobium
           meliloti)
          Length = 328

 Score =  101 bits (243), Expect = 1e-20
 Identities = 68/202 (33%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
 Frame = +2

Query: 32  LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 211
           LT LERK+ G++Q R GP +VG+ GLLQP +D IKL TKE   P  ++ F +  +P+   
Sbjct: 28  LTWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILAL 87

Query: 212 IXXXXXXXXIPY------IYNLIC-----FNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 358
                    IP+      + N I       N+ +LF   +  L VY VI  GW++NS YA
Sbjct: 88  APPFVVFAAIPFGESVSVLGNEITLYISNLNVALLFVFAVIGLEVYGVIFGGWAANSKYA 147

Query: 359 LLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXX 538
           +LG LR+ AQ ISYE+                        Q                   
Sbjct: 148 VLGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQTDVWNVVYQPIGFFVFFVA 207

Query: 539 XXAETNRTPFDFAEGERELVSG 604
             AE  R PFD AE E +L +G
Sbjct: 208 GLAEAQRIPFDLAEAEGDLGAG 229


>UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Chlamydomonadales|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Chlorogonium elongatum
          Length = 296

 Score =  101 bits (242), Expect = 2e-20
 Identities = 74/215 (34%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VL+ VAF TL ER+V+  +Q R GPN  GF G+LQ   D  KL  KE   P  S    + 
Sbjct: 13  VLLSVAFFTLAERQVMASMQRRVGPNVSGFSGVLQAIYDGAKLGVKEPILPELSASGAFT 72

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            +P+  FI        + +I +     L ++    L+SLGVY V++AGW+SNS YA LG 
Sbjct: 73  AAPMIGFIISQISFCGL-FISDAAFQGLVLM---ALSSLGVYGVMLAGWASNSKYAFLGC 128

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXA 547
           LRSVA  +SYE+                       + +                     A
Sbjct: 129 LRSVALMVSYELGFGAVLLSISLFLVDNSGMKSLNFGDASTNISFALLPLFFIFLVCILA 188

Query: 548 ETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFFG 652
           ET R PFD  E E ELV+G        G  L+F G
Sbjct: 189 ETKRVPFDLPEAEAELVAGYNVEYSSLGFALFFIG 223


>UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Desulfuromonas acetoxidans DSM 684
          Length = 329

 Score =  101 bits (241), Expect = 2e-20
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
 Frame = +2

Query: 41  LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 220
           +ERK+ G+ Q R GP +VGF G+LQ   D  KL  K+   P  ++   +  +P+  F+  
Sbjct: 35  MERKLAGHFQRRPGPMEVGFHGILQLLVDGFKLMGKQLVVPAQADKKLFILAPMLSFVPV 94

Query: 221 XXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 394
                 IP+   +  F+L  G+LF L + S+ V  V++ GW SN+ Y+L G  RSVAQ +
Sbjct: 95  FLPLLVIPFSDKIQAFDLDVGLLFILAVASINVLAVLVGGWGSNNKYSLFGAFRSVAQNV 154

Query: 395 SYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRTPFD 571
           +YE+                        Q                      AETNR PFD
Sbjct: 155 AYEIPMLIALLSVVFVTNTFSLKGIVAAQSGGSWFLFFQPLAFLIYIICMVAETNRAPFD 214

Query: 572 FAEGERELVSG 604
             E E EL +G
Sbjct: 215 LPEAESELTAG 225


>UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2;
           cellular organisms|Rep: NADH dehydrogenase subunit H -
           Janibacter sp. HTCC2649
          Length = 487

 Score =  101 bits (241), Expect = 2e-20
 Identities = 65/209 (31%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+    +   ER+V+G +Q R GPN+ G  GLLQ  +D +K   KE   P  ++ F + 
Sbjct: 63  LLVSTLMVIWFERRVIGRMQQRPGPNRNGPFGLLQTLADGMKAMLKEDVTPAKADRFVFT 122

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICF-----------NLGILFFLCLTSLGVYIVIIAGW 337
            +P+            IP    +  F           ++ +LF L +  +G+Y V++AGW
Sbjct: 123 LAPLITATMCFIGFAIIPLGGEVTMFGHTTPLQLADSSISVLFVLAIAGIGIYGVVLAGW 182

Query: 338 SSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXX 517
           SS S Y L+GGLRS AQ ISYE+                        Q            
Sbjct: 183 SSGSPYPLMGGLRSSAQMISYEIAMGLSLVAVFLYSGSMSTSQIVSSQHSIWYIIPAFFS 242

Query: 518 XXXXXXXXXAETNRTPFDFAEGERELVSG 604
                     ETNR PFD AEGE EL  G
Sbjct: 243 FFVYVITMVGETNRLPFDLAEGEGELTGG 271


>UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
           oxidoreductase subunit H 1 - Symbiobacterium
           thermophilum
          Length = 328

 Score =  101 bits (241), Expect = 2e-20
 Identities = 66/206 (32%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L V + VA   L  RK L Y   R GP KVG  G+LQP +D IK+  KE   P  ++   
Sbjct: 19  LCVTLAVAVFLLFMRKFLAYFAYRVGPVKVGPWGVLQPIADVIKMLFKEDIMPEQADPLI 78

Query: 185 YYFSPVFRFIXXXXXXXXIPYI------YNLICFNLGILFFLCLTSLGVYIVIIAGWSSN 346
           Y  +PV  F         IP+        ++   N G+L  L + ++GVY   + GW+S 
Sbjct: 79  YRLAPVIAFFCALGVWVVIPWAPRGSWWSSMADPNAGVLVILAIAAMGVYGTALGGWASQ 138

Query: 347 SNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXX 526
           + Y LLG +R+ AQ ISYE+                  Y     Q               
Sbjct: 139 NKYGLLGSMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRNMINLFPQFLGFLV 198

Query: 527 XXXXXXAETNRTPFDFAEGERELVSG 604
                 AE   TPFD  E E ELV+G
Sbjct: 199 FYIASLAEAGWTPFDLPESETELVAG 224


>UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H;
           n=22; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Bartonella henselae
           (Rochalimaea henselae)
          Length = 349

 Score =  100 bits (240), Expect = 3e-20
 Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ VA+L   +RK+   +Q+R+GPN VG  GLLQ F+D IK   KE   P  +N   + 
Sbjct: 27  LLLLVAYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPAGANKGVFL 86

Query: 191 FSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +P             IP    + +   N+G+L+ L ++SL VY VI+ GW+SNS Y  L
Sbjct: 87  LAPFVSATLALSTWAVIPVNEGWAVANINVGLLYILAISSLEVYGVIMGGWASNSKYPFL 146

Query: 365 GGLRSVAQTISYEV 406
           G LRS AQ +SYEV
Sbjct: 147 GALRSAAQMVSYEV 160



 Score = 33.1 bits (72), Expect = 6.1
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFD  E E ELV+G
Sbjct: 221 AETNRPPFDLVEAESELVAG 240


>UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=7; Bacteroidetes|Rep: NADH-quinone oxidoreductase
           subunit H - Bacteroides thetaiotaomicron
          Length = 358

 Score =  100 bits (240), Expect = 3e-20
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = +2

Query: 32  LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 211
           L  +ERKV G+ Q R GPN+VG  G +Q   D +K+ TKE   P  ++ F Y  +P    
Sbjct: 47  LIYMERKVCGFFQCRLGPNRVGKWGSIQVICDVLKMLTKEIFTPKDADRFLYNLAPFMVI 106

Query: 212 IXXXXXXXXIPYIYN--LICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 385
           I        IP+     ++ FN+G+ F L  +S+GV  +++AGW SN+ ++L+G +RS A
Sbjct: 107 IASFLTFACIPFNKGAEILNFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGA 166

Query: 386 QTISYEV 406
           Q ISYE+
Sbjct: 167 QIISYEL 173


>UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Mermithidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Agamermis sp. BH-2006
          Length = 310

 Score =   99 bits (238), Expect = 5e-20
 Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ +L+ VAF TL ERK L Y Q+R GPNK+ F GL QPF D +KLF K       ++Y 
Sbjct: 26  VIFILLSVAFFTLTERKFLSYSQLRLGPNKMFFNGLFQPFLDGVKLFKKNSLINLKNHYI 85

Query: 182 CYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            Y        +        IP+    N I      LF + +  +  Y++++ GWSS +NY
Sbjct: 86  LYKIMSFMILLVSLIMWIMIPFSSWSNKIMLP---LFIILMFGISSYMMLLLGWSSMNNY 142

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           +L+GG RS+AQ +S+E+                                           
Sbjct: 143 SLMGGSRSLAQVLSFEMLITLLVLITFVLKSSMSLKIL-----DYKSPMLFFFILICFSI 197

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
               E +R P D AEGE ELVSG
Sbjct: 198 SIILEAHRAPLDLAEGESELVSG 220


>UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           2 - Acidobacteria bacterium (strain Ellin345)
          Length = 354

 Score =   99 bits (238), Expect = 5e-20
 Identities = 74/227 (32%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I  +L  VA+   LERKV+G +Q R GP +VG  GLLQP +D +K   KE   P   N  
Sbjct: 19  IFVLLTAVAYTVWLERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDLLPPHVNKP 78

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNL---------------------ICFNLGILFFLCL 298
            Y  +P+            +P+   L                     +  N+G+L  L +
Sbjct: 79  LYILAPMLAVAMALLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINIGLLIILGV 138

Query: 299 TSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLY 478
           TS+GVY + +AGWSSNS Y+LLG LR+ AQ +SYEV                        
Sbjct: 139 TSIGVYGIALAGWSSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSFSLREIVRL 198

Query: 479 QE-----XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
           Q+                         AETNR PFD  E E ELV+G
Sbjct: 199 QQGGFWNWNIFGGFQFIAFFIYLTSAYAETNRIPFDLPEAETELVAG 245


>UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Dicyema misakiense|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Dicyema misakiense
          Length = 271

 Score = 99.5 bits (237), Expect = 6e-20
 Identities = 71/198 (35%), Positives = 92/198 (46%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+ VAFLTLLERKV+GYI  R GPNK+  IG+LQP  D +KLF K              
Sbjct: 3   MLLAVAFLTLLERKVMGYIHGRVGPNKILLIGVLQPIVDGVKLFLKSHMIS--VKVLPSV 60

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            S +   +          Y+         +L +L + SL V+ ++IA WSS S+Y +L  
Sbjct: 61  LSLIVPLLLLCVLDVNSSYM---------LLMYLAVLSLSVWPLLIASWSSYSSYPVLAS 111

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
           LR VAQ+ISYEV                       +                      +E
Sbjct: 112 LRIVAQSISYEVVLYLIFIPLVVLSVSWSG-----FAPTYSCGIYCVSFVFLGVIVGLSE 166

Query: 551 TNRTPFDFAEGERELVSG 604
            +RTPFDFAEGE ELVSG
Sbjct: 167 MHRTPFDFAEGESELVSG 184


>UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Thaumamermis cosgrovei|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Thaumamermis cosgrovei
          Length = 293

 Score = 98.3 bits (234), Expect = 1e-19
 Identities = 68/200 (34%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +LI +AF TLLERK LG  Q+R GPNKV F G +QP  D IKL  K+    N   Y   Y
Sbjct: 20  ILISIAFFTLLERKFLGSTQLRFGPNKVSFWGWIQPILDGIKLL-KKTNILNLKIYTTIY 78

Query: 191 FSPVFRFIXXXXXXXXIP--YIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           F   F  +        +   Y++NL    L +++ L +  L  +++++ GWSS S +ALL
Sbjct: 79  FFMSFAILILALLIWAVMPFYLWNLKM--LVLMWILMVLGLSAFMILMIGWSSLSKFALL 136

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G  RS++Q +S+EV                  Y  +L                       
Sbjct: 137 GSNRSISQVLSFEVN-FTMLIFLPFVMKCSMTYASFLSMS------LNFLTILLTGLTLV 189

Query: 545 AETNRTPFDFAEGERELVSG 604
            E  R P D +EGE ELVSG
Sbjct: 190 MEVQRAPADLSEGESELVSG 209


>UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Biomphalaria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Biomphalaria straminea
          Length = 138

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 45/100 (45%), Positives = 62/100 (62%)
 Frame = +2

Query: 107 LLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILF 286
           +LQPF+DA+KLF  E   P  SN   Y  +P+  F          P  Y +   + G+L 
Sbjct: 1   ILQPFADAVKLFLNEMILPMKSNKILYVVAPIMGFALALFLWVIYPSKYCVKFISFGLLI 60

Query: 287 FLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
           FLC++++ VY +++AGW+SNS YA LG LR+ AQTISYEV
Sbjct: 61  FLCISAINVYCILLAGWTSNSKYAFLGALRASAQTISYEV 100


>UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Aquificaceae|Rep: NADH-quinone oxidoreductase
           subunit H - Aquifex aeolicus
          Length = 336

 Score = 97.5 bits (232), Expect = 2e-19
 Identities = 70/215 (32%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
 Frame = +2

Query: 2   ILGVLIGV-AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           +  + +G+ A+LT  ERK+ G+IQ R GP  VG  G+LQP +DA+KL TKE   P  ++ 
Sbjct: 18  VFSLALGIGAYLTWFERKLAGHIQNRLGPTVVGKFGILQPLADALKLATKEVIIPRGADK 77

Query: 179 FCYYFSPVFRFIXXXXXXXXIP----------YIYNLIC-FNLGILFFLCLTSLGVYIVI 325
             YY + V   +        IP          YI  +I   N+ +L      SL VY  I
Sbjct: 78  PVYYAAVVMALVPSILLLTIIPFGPGFRVGNTYIEPIIADVNIALLLAFAFGSLSVYGTI 137

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFY--LYQEXXXXX 499
            +GW+SNS YA +G LR  A  I+YEV                          Q+     
Sbjct: 138 FSGWASNSKYAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIVEAQIQKGVWFI 197

Query: 500 XXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                          AE+ R PFD  E E ELV+G
Sbjct: 198 FYQPVAFILYLFCMLAESGRVPFDIQEAEAELVTG 232


>UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=2; Flexibacteraceae|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Cytophaga hutchinsonii (strain ATCC 33406
           / NCIMB 9469)
          Length = 365

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +L+   F+   ERKV  +IQ R GP +VG  G+LQ  +D IKL  KE      +N F + 
Sbjct: 11  ILLYAVFVVWAERKVAAFIQDRLGPMEVGPYGMLQTIADLIKLLQKEDIIATGANRFLFR 70

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLI--CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +PV  F         +P+  +LI    ++G+ F + + SL V  + +AGW+SN+ +++L
Sbjct: 71  LAPVLIFTAIFAGFATLPFAPDLIGSKADVGVFFMITIVSLDVVGIFLAGWASNNKFSIL 130

Query: 365 GGLRSVAQTISYEV 406
           G  R++AQ ISYE+
Sbjct: 131 GAFRAIAQVISYEI 144



 Score = 34.3 bits (75), Expect = 2.6
 Identities = 15/20 (75%), Positives = 15/20 (75%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE NR PFD  EGE ELVSG
Sbjct: 223 AECNRAPFDIPEGESELVSG 242


>UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=11; Schistosomatidae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Schistosoma japonicum (Blood
           fluke)
          Length = 296

 Score = 94.7 bits (225), Expect = 2e-18
 Identities = 64/202 (31%), Positives = 93/202 (46%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL  VAF  L ERKVLGYIQ+RKGPNKVG +GL Q F+D IKL +K +      + +
Sbjct: 13  LLVVLFLVAFFILSERKVLGYIQLRKGPNKVGLVGLFQSFADFIKLLSKYKIDGYTVHSW 72

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
             +F      I               + +   +L+ L L++   Y +++ GW S + Y+L
Sbjct: 73  FSWFGCAILLICSSIGVFIYASDCGGLYYKFMMLYILILSTFTGYGLLMLGWGSWNKYSL 132

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           +  +R    +IS+E                   Y  Y   +                   
Sbjct: 133 ISAVRVAFASISFEA------TFMCLVLVLGVIYNDYGNLDITYLIVIAPLNYFAWSVSL 186

Query: 542 XAETNRTPFDFAEGERELVSGI 607
            AE+NR+PFD+ E E ELVSG+
Sbjct: 187 LAESNRSPFDYGESESELVSGL 208


>UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Rep:
           NADH dehydrogenase - Roseiflexus sp. RS-1
          Length = 452

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           ER+V+  +Q R GPN+VG  GLLQP +DA+K+FTKE   P  ++ + +  +PV       
Sbjct: 45  ERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKEDIVPRNADRWVHLLAPVVSLAPVA 104

Query: 224 XXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 397
                IP+   +  I  N+ +L+ + ++++    +++AGW SN+ +ALLG +R+VAQ +S
Sbjct: 105 MMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLMMAGWGSNNKFALLGAMRAVAQLVS 164

Query: 398 YEV 406
           YE+
Sbjct: 165 YEI 167


>UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1
           (NAD(P)Hdehydrogenase I, chain 1); n=1; Campylobacter
           fetus subsp. fetus 82-40|Rep: NAD(P)H-quinone
           oxidoreductase chain 1 (NAD(P)Hdehydrogenase I, chain 1)
           - Campylobacter fetus subsp. fetus (strain 82-40)
          Length = 425

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 23/221 (10%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGL-----LQPFSDAIKLFTKERTYPN-FS 172
           +L+ +  L LLERK+  +IQ R GPN+    G+     +Q  +DA+KL  KE   P+   
Sbjct: 18  ILLLIPILVLLERKISAFIQDRPGPNRANIAGIRLGGIIQALADALKLAIKEDFTPSSIR 77

Query: 173 NYFCYYFSPVFRFIXXXXXXXXIPY-----------IYNLICFNLGILFFLCLTSLGVYI 319
           + F +  +P+  F+        IP+           +   I F+ G+L++L + SL +Y 
Sbjct: 78  SKFLFTIAPMILFLMSTLTIAVIPFSDYFTIDGVKHLMQGIPFDGGMLWYLGVASLSIYG 137

Query: 320 VIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----- 484
           +++AG++SN+ Y+LLG LR+ +  ISYE+                    F L Q+     
Sbjct: 138 IMLAGYASNNKYSLLGSLRAASGAISYEIPLGLAVVSMILTYDSINLNDFVLQQQGSFLG 197

Query: 485 -XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                                AETNR PFD AEGE E+V+G
Sbjct: 198 LPSWGIFIQPLAAIIFIICAFAETNRAPFDLAEGESEIVAG 238


>UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=2; Chloroflexus|Rep: Respiratory-chain NADH
           dehydrogenase, subunit 1 - Chloroflexus aurantiacus
           J-10-fl
          Length = 440

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
 Frame = +2

Query: 29  FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 208
           F T  ER+V+  +Q R GPN+VG  G+ QP +D +K+FTKE   P  ++   ++ +P   
Sbjct: 44  FFTYYERRVIARMQDRIGPNRVGPEGIWQPIADGVKMFTKEDIVPAAADRIVHFLAPCVV 103

Query: 209 FIXXXXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 382
                     +P+   +   +L  G+LFF  ++S+    +++AGW+SN+ ++LLG +R+V
Sbjct: 104 VAPTVLMFAVVPWGPGMTPVDLPTGLLFFFAVSSISAVGLMMAGWASNNKFSLLGAMRAV 163

Query: 383 AQTISYEV 406
           AQ +SYE+
Sbjct: 164 AQMVSYEI 171


>UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain
           49kDa; Respiratory-chain NADH dehydrogenase, subunit 1;
           n=2; core eudicotyledons|Rep: NADH-ubiquinone
           oxidoreductase, chain 49kDa; Respiratory-chain NADH
           dehydrogenase, subunit 1 - Medicago truncatula (Barrel
           medic)
          Length = 288

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +LG+ I V  +  LER++   IQ R GP   G  G+LQ  +D  KL  KE   P+  +  
Sbjct: 137 VLGITISVLAIVWLEREISAGIQQRIGPEYAGPFGILQALADGTKLLFKENLIPSRGDIR 196

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +   P    I        IP+ YN +   FN+G+  ++ ++S+    ++++G+ SN+ Y
Sbjct: 197 LFSIGPSISVISILISYSVIPFGYNFVLSDFNIGVFLWIAISSIAPIGLLMSGYGSNNKY 256

Query: 356 ALLGGLRSVAQTISYEV 406
           + LGGLR+ AQ+ISYE+
Sbjct: 257 SFLGGLRAAAQSISYEI 273


>UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=33; Arion|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Arion ater
          Length = 145

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 98  FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNL- 274
           ++GLLQPF+DA+KLF KE   P  SN   +   PV  F         +    N+  + L 
Sbjct: 1   YLGLLQPFADALKLFLKETIKPQHSNSIMFTVVPVLGF-SLALMFWGMTSSSNISYYLLF 59

Query: 275 GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
            +L F C+TSL VY+V+++GW+SNS YA LG LR+ AQTISYE+
Sbjct: 60  SLLLFFCMTSLNVYVVLLSGWTSNSMYAFLGALRASAQTISYEI 103


>UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Eukaryota|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Chlamydomonas reinhardtii
          Length = 292

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 56/135 (41%), Positives = 76/135 (56%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ VL+ VA  TL ER V+  +Q R GP   G  GLLQPF D +KL  KE   P+ S+  
Sbjct: 10  IVPVLLSVAMFTLAERTVMASMQRRFGPQVSGISGLLQPFWDGLKLGVKEPVLPDSSSAG 69

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +  SP+  F+        I     +   +   L  + ++SL VY V++AGW+SNS YA 
Sbjct: 70  AFAASPMISFVLSQVAWVGI----CISDASFQGLVIMAISSLAVYGVMLAGWASNSKYAF 125

Query: 362 LGGLRSVAQTISYEV 406
           LG LRSVA  +SYE+
Sbjct: 126 LGCLRSVALMVSYEL 140


>UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae
           bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
           bacterium TAV2
          Length = 396

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = +2

Query: 26  AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 205
           A  T+ ERKVLG  Q R GPN+ G  G +QPF+DA+K  TKE   P  ++   ++ +P  
Sbjct: 47  ALFTVTERKVLGRFQNRYGPNRTGPFGYMQPFADAVKALTKEDLIPATADKLLHFLAPCC 106

Query: 206 RFIXXXXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 379
                      IP   +L   NL  GIL+F    +     + +AGWSS++ Y+L+  +R+
Sbjct: 107 AVFFALLGFAVIPCGLHLTALNLDAGILYFFAAGAATELAIFMAGWSSHNKYSLISAMRA 166

Query: 380 VAQTISYEV 406
           +AQ IS+E+
Sbjct: 167 LAQLISFEL 175


>UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Deroceras sp. 60A-JQ-2003|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Deroceras sp. 60A-JQ-2003
          Length = 145

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 45/101 (44%), Positives = 61/101 (60%)
 Frame = +2

Query: 104 GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGIL 283
           G+ QP +DA+KLF KE+     SN   +Y +PV  F+         P  + +     G+L
Sbjct: 3   GIFQPLADALKLFMKEKVNLVSSNSVVFYITPVIGFMLGLLIWFLYPSHWAINFVVWGVL 62

Query: 284 FFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
            F C++SL VYI ++AGW SNS YA LG +R+ AQTISYEV
Sbjct: 63  CFFCISSLNVYITMMAGWGSNSKYAFLGAIRAAAQTISYEV 103


>UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Leptorhynchoides thecatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Leptorhynchoides thecatus
          Length = 305

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 64/202 (31%), Positives = 87/202 (43%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ VL+ ++F TLLERKVLG  Q+RKGPNK    GL QP  D  KLF K     +     
Sbjct: 16  VIIVLVLLSFFTLLERKVLGLGQVRKGPNKGIIWGLFQPLLDGFKLFMKGINLLSLGGLL 75

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            YYFSP+               ++         +  + ++SL +Y   ++G  S S Y +
Sbjct: 76  NYYFSPMLGLSTVLFIWGLFSLVWGSGSMTHIFVIPILISSLLIYFFYLSGLFSGSVYGV 135

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG LR+ AQ +SYE                      ++                      
Sbjct: 136 LGSLRAAAQFLSYECIVLLSFISMFGLLGSYLVPILFV-------PFLISIIFILLVFGV 188

Query: 542 XAETNRTPFDFAEGERELVSGI 607
             E NRTP DF EGE ELVSG+
Sbjct: 189 IMEVNRTPVDFVEGESELVSGL 210


>UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit 1,
           chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit
           1); n=178; cellular organisms|Rep: NAD(P)H-quinone
           oxidoreductase subunit 1, chloroplast (EC 1.6.5.-)
           (NAD(P)H dehydrogenase subunit 1) - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 360

 Score = 92.3 bits (219), Expect = 9e-18
 Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +LG++ GV  +  LER++   IQ R GP   G +G+LQ  +D  KL  KE   P+  N  
Sbjct: 37  VLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTP 96

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +   P    I        IP+  +L+    N+GI  ++ ++S+    ++++G+ SN+ Y
Sbjct: 97  LFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKY 156

Query: 356 ALLGGLRSVAQTISYEV 406
           + LGGLR+ AQ+ISYE+
Sbjct: 157 SFLGGLRAAAQSISYEI 173


>UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H;
           n=10; Chlorobiaceae|Rep: NADH-quinone oxidoreductase
           subunit H - Chlorobium tepidum
          Length = 359

 Score = 91.9 bits (218), Expect = 1e-17
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           ERK+  ++Q R GP +VGF GLLQ  +D +KL  KE   P  ++ F +   P   F+   
Sbjct: 49  ERKISAFMQDRLGPMEVGFWGLLQTLADILKLLQKEDIVPTVADKFLFVIGPGILFVGSF 108

Query: 224 XXXXXIPYIYNLI--CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 397
                +P+    I    N+G+ + + + ++ V  ++ AGW SN+ +AL G +RSVAQ +S
Sbjct: 109 LAFAVLPFGPAFIGADLNVGLFYAVGIVAIEVVGILAAGWGSNNKWALYGAVRSVAQIVS 168

Query: 398 YEVRXXXXXXXXXXXXXXXXXYFFYLYQE--------XXXXXXXXXXXXXXXXXXXXAET 553
           YE+                      L Q                             AET
Sbjct: 169 YEIPASIALLCAAMLAGTLSMQQIILMQAGPNGFLHWFLFTNPIAWLPFLIYFISSLAET 228

Query: 554 NRTPFDFAEGERELVSG 604
           NR PFD  E E ELV+G
Sbjct: 229 NRAPFDIPEAESELVAG 245


>UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=30; Schistosoma|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Schistosoma malayensis
          Length = 297

 Score = 91.5 bits (217), Expect = 2e-17
 Identities = 62/201 (30%), Positives = 92/201 (45%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L VL+ VAF  L ERKVL YIQ+RKGPNKVG  GLLQ F+D +KL  K +      + +
Sbjct: 15  LLLVLLLVAFFILCERKVLSYIQLRKGPNKVGIAGLLQSFADFMKLVVKIKVNGYIVHSW 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
             +      F             ++ I ++  +L+ L + +   Y +++ GW+S + Y+L
Sbjct: 75  FGWLGCFMLFFCSCMGVYIYSCSFSGIYYSFMMLYILMVFTFISYGLLMLGWASWNKYSL 134

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           L  +R    ++SYE+                    F L                      
Sbjct: 135 LSAVRVAFSSVSYEMILMCVLLVFGMLLGSYGNVSFCLMS------FITPLNYIVWIISM 188

Query: 542 XAETNRTPFDFAEGERELVSG 604
            +E+NR PFD+ E E ELVSG
Sbjct: 189 FSESNRAPFDYGESESELVSG 209


>UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Globodera pallida|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Globodera pallida
          Length = 287

 Score = 91.1 bits (216), Expect = 2e-17
 Identities = 68/215 (31%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           VLI V FL + E  +LG+ Q+R  PNK  FIG LQ  SD +KLF KE  +      F ++
Sbjct: 13  VLISVVFLVMSEHYLLGFSQLRVSPNKFFFIGYLQALSDGLKLFKKELIFLLGFLVFIFF 72

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           F  + +F         + + + L C  L   I F + L  L  ++     + S S Y+LL
Sbjct: 73  FFSLSQFF-----LSLLFFSFFLFCLGLKFNIFFLMFLLGLITFLFFFLSYYSVSKYSLL 127

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G LR  +Q++S+++                  +F  L  E                    
Sbjct: 128 GSLRLFSQSVSFDL-------VYFFLLFMLVFFFQSLDLEVIFFFLFFILFFFFLLLLLV 180

Query: 545 AETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFF 649
            E NR+PFDF+EGE ELVSG  Y +   G+   FF
Sbjct: 181 TEANRSPFDFSEGESELVSG--YNLELGGLVFIFF 213


>UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=12; Bacteria|Rep: NADH-quinone oxidoreductase subunit
           H 2 - Rhodopseudomonas palustris
          Length = 319

 Score = 90.6 bits (215), Expect = 3e-17
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ +L+     T +ER++LG++Q R GPN+VG  G LQ  +D +K+ TKE   P  ++  
Sbjct: 15  IMVLLVLAGTFTWVERRLLGFVQERYGPNRVGPFGSLQWVADTVKILTKEDRPPPGADKL 74

Query: 182 CYYFSPVFRF--IXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            Y  +P      +        I   + L   ++G+LF L +  L  Y  ++  W+SN+ +
Sbjct: 75  LYILAPAVAATPVLAGFGVVAIGDGWALSSVDVGLLFLLGMLGLTAYAAVLGAWASNNRF 134

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           +LLGG+R+ AQ ++YEV                        Q                  
Sbjct: 135 SLLGGMRAAAQMLAYEVFLGLSLMGVVMIAGSFSMAEIVEAQRGVWFVVLQPLGMALFTI 194

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              A  +R PFD  E E +L++G
Sbjct: 195 AGIAAAHRLPFDLPESENDLIAG 217


>UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Deltaproteobacteria|Rep: NADH-quinone
           oxidoreductase subunit H - Desulfotalea psychrophila
          Length = 333

 Score = 90.2 bits (214), Expect = 4e-17
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V +  A+L   ER+   +IQ R GP + G  GLLQP  D IKL TK+   P   +   + 
Sbjct: 19  VAVNAAYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFM 78

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFN--LGILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
            +PV            IP+  N++  N  +G+L  L   S     +++AGWSS + Y+++
Sbjct: 79  VAPVLAMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSMM 138

Query: 365 GGLRSVAQTISYEV 406
             +R+V+QTI+YE+
Sbjct: 139 AAIRAVSQTIAYEI 152



 Score = 35.9 bits (79), Expect = 0.86
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSGI*Y*I*KRGICLYFFG 652
           AETNR PFD  E E ELV+G        G  L+F G
Sbjct: 211 AETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMG 246


>UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH
           dehydrogenase subunit H; n=1; uncultured Nitrospinaceae
           bacterium|Rep: Putative respiratory-chain NADH
           dehydrogenase subunit H - uncultured Nitrospinaceae
           bacterium
          Length = 358

 Score = 89.8 bits (213), Expect = 5e-17
 Identities = 69/221 (31%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
 Frame = +2

Query: 2   ILGVLIG--VAFLTLLERKVLGYIQIRKGPNKVG-----FIGLLQPFSDAIKLFTKERTY 160
           I  V +G     LT +ERK    +Q R G N+       F+GL    +DA+K+FTKE   
Sbjct: 15  IFAVTVGFFAPVLTWVERKQSALMQDRIGANRADIMGFTFLGLFHIIADALKMFTKEDFI 74

Query: 161 PNFSNYFCYYFSPVFRFIXXXXXXXXIPY---------IYNLICFNL--GILFFLCLTSL 307
           P+ +N F +  SP+   +        +P+           NL+  +L  G+LF   + SL
Sbjct: 75  PDGANKFLHTMSPIVALVPALLTFAVVPFGGQYTLFDKEVNLVISDLDVGLLFVFAIASL 134

Query: 308 GVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE- 484
             Y  +IAGWSSN+N++LLG +R+ +Q ISYEV                        QE 
Sbjct: 135 ATYGYVIAGWSSNNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSMKLTEIGTIQEN 194

Query: 485 -XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                                AE  R PFD  E E ELV+G
Sbjct: 195 FWMWGIFLQPLGFFMFLTASIAENKRIPFDAPEAESELVAG 235


>UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Bdellovibrio bacteriovorus|Rep: NADH-quinone
           oxidoreductase subunit H - Bdellovibrio bacteriovorus
          Length = 385

 Score = 89.4 bits (212), Expect = 7e-17
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 21/149 (14%)
 Frame = +2

Query: 23  VAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 202
           V  L  LER+   +IQ R GPN+VG +GL+Q  +DA+K   KE   P  +  F YY +P+
Sbjct: 28  VPILVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMPQTAKPFLYYAAPI 87

Query: 203 FRFIXXXXXXXXI-------------------PYIYNLICFNL--GILFFLCLTSLGVYI 319
           F  I        I                   PY + +  +++  GI+F L ++SL  Y 
Sbjct: 88  FALIPGAVAFSAIPLSSPIQVGTFEMFGSTWGPYTFLVQGYDIGVGIVFILGVSSLAAYT 147

Query: 320 VIIAGWSSNSNYALLGGLRSVAQTISYEV 406
           +++AGW S + Y L+G LR+ AQTISYE+
Sbjct: 148 LLMAGWGSGNKYTLMGALRASAQTISYEL 176



 Score = 35.1 bits (77), Expect = 1.5
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE+NR PFD AEGE ELV G
Sbjct: 240 AESNRLPFDLAEGESELVGG 259


>UniRef50_A7KJL0 Cluster: NADH dehydrogenase subunit 1; n=12;
           Dysdera|Rep: NADH dehydrogenase subunit 1 - Dysdera
           lancerotensis
          Length = 112

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           + +L+ +AF T+LERK L YIQ RKGPNKV  +G+LQPFSDAIKLF K  T P+ SN   
Sbjct: 12  ISILVSIAFYTILERKFLSYIQTRKGPNKVSLLGILQPFSDAIKLFNKTMTLPSASNITM 71

Query: 185 YYFSPVFRFIXXXXXXXXIPYI-YNLICFNLGILFFLCLTS 304
               P   F         +P   +N+I  +L  L F  ++S
Sbjct: 72  IVTFPTITFFLSLILWPTLPLSHFNMIDSSLTSLIFFVISS 112


>UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase
           subunit H - Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 413

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           E +V   +Q R G N+VG  G  Q  +DA+KL  KE   P  ++   +  +P F  +   
Sbjct: 51  EMRVSARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIPADADRLLFRAAPYFVLVGFA 110

Query: 224 XXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 397
                +P+  +LI    N+GI +   +T+L V  +++AGWSSNS +AL GG+RS AQ IS
Sbjct: 111 LVFVALPFGESLIAADLNVGIFYITAVTALVVVGILVAGWSSNSKWALFGGMRSAAQVIS 170

Query: 398 YEV 406
           YE+
Sbjct: 171 YEI 173


>UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Strelkovimermis spiculatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Strelkovimermis spiculatus
          Length = 288

 Score = 88.2 bits (209), Expect = 2e-16
 Identities = 60/201 (29%), Positives = 88/201 (43%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ ++I + F TLLERK+L   QIR GPNK   IG++QP  D +KL  K   +       
Sbjct: 7   IILIMISIGFFTLLERKLLSLSQIRLGPNKTLIIGMIQPILDGLKLIKKGIIFNKKIYII 66

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
            +     F  +         P++   I  ++ + + L L  L  Y++ + GWSS S ++ 
Sbjct: 67  MFNMGAFFLLMLAIFLWMSFPFLM-WINKSMVMFWILLLLGLSTYMLFLIGWSSLSKFSF 125

Query: 362 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 541
           LG +R++AQTIS EV                  Y    Y +                   
Sbjct: 126 LGSMRALAQTISLEV---LFSMLMFLGFSLMSKYNTTYYNQ--SNNLVQVTLTFYFFITI 180

Query: 542 XAETNRTPFDFAEGERELVSG 604
             E +R P D +E E ELVSG
Sbjct: 181 LIEAHRAPMDLSESESELVSG 201


>UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=16; Oligohymenophorea|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paramecium tetraurelia
          Length = 261

 Score = 87.4 bits (207), Expect = 3e-16
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L V + +A +TLLERK+L  +Q R GPN VG+ G LQ  +DA+KLF K    P+ +N F
Sbjct: 9   MLVVTLIIASITLLERKLLSLVQRRVGPNFVGYKGRLQYLADALKLFLKGVAIPSGANSF 68

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +   P               +  +L  F++   I++   L+ L    V++ G+ S + Y
Sbjct: 69  FFVAMPSLAGAVCYTFWMNSIWGPSLSMFDVEYNIVYASLLSILFGLCVMLTGYFSKNKY 128

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           +++ GLR+    ++ E+                    F +YQE                 
Sbjct: 129 SVMAGLRAAILMLNLEIFLGIVFLNVCFLVESFSFAAFAVYQEIFWLIFLFFFLLSNILL 188

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
               E NRTPFD AE E ELV+G
Sbjct: 189 VFLLEVNRTPFDLAEAESELVTG 211


>UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1;
           Actinomyces odontolyticus ATCC 17982|Rep: Putative
           uncharacterized protein - Actinomyces odontolyticus ATCC
           17982
          Length = 442

 Score = 87.0 bits (206), Expect = 4e-16
 Identities = 61/212 (28%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+ ++  V     +ER+ LG +Q R GPN  G +GL Q F+DA KL  KE  +   +  F
Sbjct: 32  IVFLIANVLLALWVERRGLGRMQTRPGPNVAGPLGLFQAFADAGKLLFKEDMWTRRAERF 91

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFN-----------LGILFFLCLTSLGVYIVII 328
            Y+ +P             IP   N+  F            +  L+ L + SLG+Y +++
Sbjct: 92  LYFLAPAIAAFAAFSVYAVIPMGPNVKIFGHSTPLQLADMPVASLYILAIASLGLYGIVL 151

Query: 329 AGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXX 508
            GWS+ S   L G +RS AQ ISYE+                        Q         
Sbjct: 152 GGWSTRSTLPLYGAVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQGQFWWAFTL 211

Query: 509 XXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                        E NR PFD  E E E+V+G
Sbjct: 212 FPAFVIYCISAVGEVNRLPFDLPEAEGEIVAG 243


>UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Microcotyle sebastis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Microcotyle sebastis
          Length = 305

 Score = 85.8 bits (203), Expect = 8e-16
 Identities = 61/200 (30%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
 Frame = +2

Query: 23  VAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTK----ERTYPNFSNYFCYY 190
           VAF  LLERK+LG  Q R GP KV F+G+LQ F+D IKL  K      +Y        +Y
Sbjct: 24  VAFFVLLERKILGVCQARLGPQKVSFLGILQSFADFIKLLAKLGVSFGSYKGLKYRGLFY 83

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALL 364
           +  V  F+           + N+  + +     + +  +SL  Y  I+ GW SNS Y+L 
Sbjct: 84  WLGVIYFLLGATTFISFFILGNVSSWVVSNYTCWLIVFSSLSGYGFIMCGWGSNSKYSLY 143

Query: 365 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 544
           G +R+   +IS+E                    F  +                       
Sbjct: 144 GAIRASFSSISFE--GVLMCIVLSVGLYYGCYSFSVINNYEGSLSIGALTLYICSVIGVM 201

Query: 545 AETNRTPFDFAEGERELVSG 604
           +E NR+PFDF+E E +LVSG
Sbjct: 202 SECNRSPFDFSESESDLVSG 221


>UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H); n=2;
           Methanosarcina|Rep: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H) - Methanosarcina
           mazei (Methanosarcina frisia)
          Length = 350

 Score = 85.8 bits (203), Expect = 8e-16
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 15/147 (10%)
 Frame = +2

Query: 11  VLIGVAFL-----TLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSN 175
           VL+G  FL       +ERK+   IQ+R GP++VG  GLLQ  +DAIKLFTKE   P  ++
Sbjct: 26  VLVGAIFLGGMAAVWIERKLSADIQLRYGPSRVGKFGLLQLVADAIKLFTKEDVRPGNAD 85

Query: 176 YFCYYFSPVFRFIXXXXXXXXIPY--------IYNLIC--FNLGILFFLCLTSLGVYIVI 325
            F Y  +PVF           IP         +Y L     ++ ILF   ++++ ++ + 
Sbjct: 86  RFLYDNAPVFMLTSLFLMLVAIPVGAVFIDGNLYPLAVTEMDISILFIEAVSAINIFGIF 145

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEV 406
           +A + SN+ Y+LLG  R+ A+ I YEV
Sbjct: 146 MAAYGSNNKYSLLGAFRNFARMIGYEV 172


>UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Romanomermis|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Romanomermis nielseni
          Length = 305

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 56/198 (28%), Positives = 88/198 (44%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           +++ +A+ TLLERK+L   Q+R GPNKV  +GL+QP  D +KL  K       S      
Sbjct: 12  IMLAIAYFTLLERKILSLSQMRLGPNKVLMLGLIQPILDGLKLMKKLLIMSLNSMVLFLM 71

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
            + ++ F          P+ + L+  +   L+ L L     Y +++ GWSS + ++ LGG
Sbjct: 72  MNSMWMFSISMLLWFMFPF-FALMNKSSFFLWILLLFGFLSYFILMIGWSSMNKFSYLGG 130

Query: 371 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 550
            RS++Q++S+E+                      L                        E
Sbjct: 131 TRSLSQSLSFEILILLIMTPPFMISKCS------LLTLSNKFSLINFTMILVFFILSILE 184

Query: 551 TNRTPFDFAEGERELVSG 604
             R+P D +EGE ELVSG
Sbjct: 185 CQRSPMDLSEGESELVSG 202


>UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H;
           n=33; Epsilonproteobacteria|Rep: NADH-quinone
           oxidoreductase subunit H - Campylobacter jejuni
          Length = 332

 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 65/215 (30%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I   L G+A  T  ERKVL Y Q R GP+ VG  GL+Q  +D IKLFTKE   P+ S  F
Sbjct: 21  IFASLAGLA--TYAERKVLAYFQRRIGPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKF 78

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICF-----------NLGILFFLCLTSLGVYIVII 328
            +  +P+   I        IP +     F           N+ +LF +  + L  Y V +
Sbjct: 79  IFAIAPLISAICAFVSLAAIPMLPEFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFL 138

Query: 329 AGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXX 508
            G +SN+ +++LG  R +   ISYE                        YQ         
Sbjct: 139 GGLASNNKWSILGAARGLVSIISYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLI 198

Query: 509 XXXXXXXXXXXXA---ETNRTPFDFAEGERELVSG 604
                       A   ETNRTP    E + E+V+G
Sbjct: 199 FKQPLAFVLFIIALFIETNRTPLCLTENDAEIVAG 233


>UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1;
           Blastopirellula marina DSM 3645|Rep: NADH dehydrogenase
           I chain H - Blastopirellula marina DSM 3645
          Length = 434

 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNYFCY 187
           + +G      +ERK+ G IQ R GP + G   G LQ  +D IKL +KE   P  ++   +
Sbjct: 33  IAVGAVVFIWMERKIAGRIQDRLGPTRTGGKFGWLQTLADGIKLLSKEDLMPRDADPLLF 92

Query: 188 YFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLG--VYIVIIAGWSSNSNYAL 361
             +P             +P+    +   L I  F  +  LG  V+ VI+AG+ S S ++L
Sbjct: 93  KLAPYISLAASFTAFLALPFASGWVGVRLNIALFFVIAVLGLEVFGVILAGYGSGSKWSL 152

Query: 362 LGGLRSVAQTISYEV 406
            GG+R  AQ +SYEV
Sbjct: 153 FGGMRQAAQVVSYEV 167


>UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
           Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
           chain H - Sulfurovum sp. (strain NBC37-1)
          Length = 343

 Score = 80.2 bits (189), Expect = 4e-14
 Identities = 67/223 (30%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
 Frame = +2

Query: 2   ILGVLIGVA-FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           IL V+  +A F T +ERKVL ++Q R GP  VG  GLLQ  +D IKLFTKE   P  +N 
Sbjct: 24  ILAVISAIAGFGTFIERKVLAFMQRRLGPMHVGPYGLLQLVADGIKLFTKEDIVPQNANS 83

Query: 179 FCYYFSPVFRFIXXXXXXXXIP-----------------YIYNLIC-FNLGILFFLCLTS 304
             +  +P             +P                 ++ ++    N+GILF L + +
Sbjct: 84  LIFKVAPSITAATAFIALAAVPVFPDFTIPEWIPVLGGVFVPSIAADLNIGILFVLGMMA 143

Query: 305 LGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE 484
            G+Y  ++AG +  + + ++G  R+  Q +SYEV                    F   Q 
Sbjct: 144 AGLYGPLLAGMAQANKWGIIGAARTAIQFLSYEVVTGLSILAPIMLVGSLSFVDFNNAQA 203

Query: 485 ---XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                                  AETNRTPFD  E E E+VSG
Sbjct: 204 GGISHWLIWQQPVAFVLFLIAGFAETNRTPFDLLEHEAEVVSG 246


>UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4;
           Thermoplasmatales|Rep: NADH dehydrogenase I chain E -
           Thermoplasma volcanium
          Length = 346

 Score = 78.6 bits (185), Expect = 1e-13
 Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           ++ V + +  +  L RK +  +Q+R GPN+VG  G LQ  +DAIKL  KE   P   + F
Sbjct: 32  LIFVFVSLIAMIYLFRKYMARLQLRYGPNRVGKFGSLQLIADAIKLVGKESILPKLRDDF 91

Query: 182 CYYFSPVFRFIXXXXXXXXIPY-----IYNLICFNLGILFFLCLTSLGVYIV--IIAGWS 340
            Y  +P   FI        IPY     I +L   +  +   L   ++ +  +  I+AG S
Sbjct: 92  AYKTAPYIVFIGLVVGFILIPYGDFYWIGSLTITHSDVSLILFFGAIAMMPIGEILAGIS 151

Query: 341 SNSNYALLGGLRSVAQTISYEV 406
           S++ YALLG +R VA+ +S+EV
Sbjct: 152 SHNKYALLGAMRGVAKDVSFEV 173


>UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H); n=3;
           Methanosarcinales|Rep: F(420)H(2) oxidoreductase subunit
           H (F(420)H(2) dehydrogenase subunit H) - Methanosarcina
           acetivorans
          Length = 348

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
 Frame = +2

Query: 11  VLIGVAFL-----TLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSN 175
           VL+G  FL       LERK+   IQ R GP++VG  GLLQ  +DAIKLFTKE   P  ++
Sbjct: 25  VLVGAIFLGAMGAVWLERKLSADIQFRYGPSRVGKFGLLQLVADAIKLFTKEDMRPRNAD 84

Query: 176 YFCYYFSPVFRFIXXXXXXXXIP----------YIYNLICFNLGILFFLCLTSLGVYIVI 325
              +  +P+F           IP          Y   +   ++ +L+   ++++ ++ + 
Sbjct: 85  RLLFDNAPIFMMSSVFLMLVAIPVGAVFINGVEYPLAVTEMDISVLYIEAMSAITIFGIF 144

Query: 326 IAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXX 505
           +  + SN+ Y+LLG  R+ A+ + YEV                        Q        
Sbjct: 145 MIAYGSNNKYSLLGAFRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIASAQGLLWNIFL 204

Query: 506 XXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                        A+  R PFD  E E ELV+G
Sbjct: 205 QPIGFIVFFIALMADMGRLPFDQNESEEELVAG 237


>UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Propionibacterium acnes|Rep: NADH-quinone
           oxidoreductase subunit H - Propionibacterium acnes
          Length = 440

 Score = 74.9 bits (176), Expect = 2e-12
 Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGP--NKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           +L    F    ER+VL  +Q R GP  N     G+ Q   D +KL  KE   P  ++   
Sbjct: 25  LLAWTIFNVWFERRVLAKMQNRIGPIMNSAWAGGVFQAVGDGLKLIFKEMLTPKGADKIV 84

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLICFN-----------LGILFFLCLTSLGVYIVIIA 331
           +  +PV   I        IP    +  F            + +LF L + S+G+Y V++A
Sbjct: 85  FNLAPVIAGIACFASWSVIPLGGQVSMFGHTTRLQITDVPVAVLFILAVASIGIYGVVLA 144

Query: 332 GWSSNSNYALLGGLRSVAQTISYEV 406
           GWSS   Y+LLG LRS AQ ISYEV
Sbjct: 145 GWSSAGTYSLLGSLRSSAQMISYEV 169


>UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Cotesia anisotae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Cotesia anisotae
          Length = 129

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = +2

Query: 170 SNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNS 349
           S+   Y  SP   F          P+  N + F+  +L+F  L S GVY +I+AGWSSNS
Sbjct: 1   SSXXXYXXSPSXXFXLIXMIWMIYPFXTNXLMFDYSVLYFXXLMSXGVYSLILAGWSSNS 60

Query: 350 NYALLGGLRSVAQTISYEV 406
           +++++G +RS+AQ+ISYEV
Sbjct: 61  SFSMIGSIRSIAQSISYEV 79


>UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;
           n=3; Cystobacterineae|Rep: NADH ubiquinone
           oxidoreductase subunit - Myxococcus xanthus
          Length = 432

 Score = 72.5 bits (170), Expect = 8e-12
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFI----------GLLQPFSDAIKLFTKE 151
           ++ V++    LT+ ERK   +IQ R GPN+              GL    +D +K+ TKE
Sbjct: 50  LIFVMVIATLLTMAERKWSAFIQDRMGPNRGPHRPARPEERPLGGLPHILTDVLKMLTKE 109

Query: 152 RTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICF-----------NLGILFFLCL 298
              P  +N F +   P+  F         +P   ++  F           + G L+ L +
Sbjct: 110 DLIPAAANRFMFNLGPILAFAPTFALFAVVPAGPSVQVFGRNVDMVVATPDFGALYVLAI 169

Query: 299 TSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
            SL VY   +AGW+SN+ + LLGG+R+ +Q I+YEV
Sbjct: 170 ASLAVYGTALAGWASNNKFGLLGGVRATSQMIAYEV 205


>UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Spathius sp. MS-2004|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Spathius sp. MS-2004
          Length = 132

 Score = 72.5 bits (170), Expect = 8e-12
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = +2

Query: 188 YFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 367
           + +P+  F          P+ Y LI   L  L FL L S+G+Y ++I+GWSSNS++++LG
Sbjct: 18  FIAPLIMFTLIMSMWMIYPFFYQLINIPLNSLLFLSLMSMGIYGLMISGWSSNSSFSMLG 77

Query: 368 GLRSVAQTISYEV 406
            +RS+AQ+ISYEV
Sbjct: 78  SIRSIAQSISYEV 90


>UniRef50_O79095 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=12; Braconidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Cotesia congregata (Parasitoid wasp)
          Length = 135

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = +2

Query: 170 SNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNS 349
           S++  Y  SP   FI         P+  NL+ F   +L+FLCL SLGVY +I+AGWSSNS
Sbjct: 1   SSFDLYIASPSIMFILIMMLWMIYPFSSNLLMFENSMLYFLCLMSLGVYGLILAGWSSNS 60

Query: 350 NYALLGGLRSVAQTISYEV 406
           +++++G +  +    SYEV
Sbjct: 61  SFSMIGAIAQLLNQFSYEV 79


>UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Microchiroptera|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Hypsugo sp. FFM-2006A
          Length = 300

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYP 163
           I+ +L+ VAFLTLLER   GY + R GPN VG  GLLQP +DA+KLFTKE   P
Sbjct: 10  IIPILLAVAFLTLLERXXXGYXRXRXGPNIVGPYGLLQPIADAVKLFTKEPLQP 63



 Score = 37.1 bits (82), Expect = 0.37
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNR PFD  EGE ELVSG
Sbjct: 191 AETNRAPFDLTEGESELVSG 210


>UniRef50_A0RY69 Cluster: NADH-ubiquinone oxidoreductase, subunit H;
           n=2; Thermoprotei|Rep: NADH-ubiquinone oxidoreductase,
           subunit H - Cenarchaeum symbiosum
          Length = 432

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 3/191 (1%)
 Frame = +2

Query: 41  LERKVLGYIQIRKGPNKVGFI-GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 217
           +ERK+L  +Q+R GP   G + GLLQ   D +KL +KE   P  ++   +  +P+     
Sbjct: 102 VERKMLAKLQLRVGPFYCGKVEGLLQLMGDGLKLISKEIIIPAKADKPIFIAAPILFVGT 161

Query: 218 XXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 391
                  IP     +    ++G++    +      I I++ WS+NS +  +GG+R++ Q 
Sbjct: 162 AAAFVALIPVAPGWVVADVDMGLIGVFAVIGFFPIITILSAWSANSKFPFIGGIRALHQM 221

Query: 392 ISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFD 571
           +S+E+                        Q                     AE  R PFD
Sbjct: 222 VSFEIPLILSCLGVVILTGTFNLSEIAASQSFFPWIVFLPIGAIVFIICALAELERIPFD 281

Query: 572 FAEGERELVSG 604
             E E E+V+G
Sbjct: 282 LPEAESEIVAG 292


>UniRef50_Q34148 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Celastrina ladon|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Celastrina ladon (Spring azure)
          Length = 62

 Score = 65.7 bits (153), Expect = 9e-10
 Identities = 27/38 (71%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQ 115
           ++GV+I +AFLTL+ERK+L Y+QIRKGPNKVGF+G+LQ
Sbjct: 13  VVGVMISLAFLTLMERKILSYMQIRKGPNKVGFMGMLQ 50


>UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG24965;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG24965 - Caenorhabditis
           briggsae
          Length = 312

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 43/128 (33%), Positives = 60/128 (46%)
 Frame = +2

Query: 23  VAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 202
           +AF+TL ER +LG  Q R GP KV F+GL Q   D +KL  KE+  P  S+   +   PV
Sbjct: 2   IAFITLYERHLLGRSQNRLGPTKVTFMGLAQALLDGVKLLKKEQITPLNSSEVSFLLVPV 61

Query: 203 FRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 382
             F+                          CL    VY  ++ G  S S Y ++G +R+ 
Sbjct: 62  LFFL--------------------------CLIGFSVYTTLVRGIVSKSKYGMIGAIRAR 95

Query: 383 AQTISYEV 406
            Q+ISYE+
Sbjct: 96  RQSISYEI 103



 Score = 37.5 bits (83), Expect = 0.28
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AE NR PFDF+EGE ELVSG
Sbjct: 124 AELNRAPFDFSEGESELVSG 143


>UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Pelobacter propionicus DSM 2379|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Pelobacter propionicus (strain DSM 2379)
          Length = 389

 Score = 54.4 bits (125), Expect(2) = 5e-09
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
 Frame = +2

Query: 245 YIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXX 424
           Y+  +   + GIL  L ++ +G+   ++AGWSSN+ ++LLG  R+ +Q ISYEV      
Sbjct: 139 YVMQVARLDAGILVILAISGIGILGTMLAGWSSNNKFSLLGAARAASQMISYEVSMGLAL 198

Query: 425 XXXXXXXXXXXXYFFYLYQE-------XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEG 583
                           ++Q                            AE  R PFD  E 
Sbjct: 199 ISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGIILQPLAFVLFLTACIAENKRVPFDLPEC 258

Query: 584 ERELVSG 604
           E ELVSG
Sbjct: 259 ESELVSG 265



 Score = 28.7 bits (61), Expect(2) = 5e-09
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
 Frame = +2

Query: 5   LGVLIGVAFL-TLLERKVLGYIQIRKGPN-----------KVGFIGLLQPFSDAIKLFTK 148
           + V+ GVA + T +ERK    +  R G N           K+   GL+   +D  K+  K
Sbjct: 16  IAVMAGVATIFTWVERKQSAIMADRIGANRCYLRIPFTNVKIVAWGLIHGIADGSKMLLK 75

Query: 149 ERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPY 247
           E   P   + FCY  +P             IP+
Sbjct: 76  ENFTPTTYDRFCYNLAPWLALAPVLLVFSAIPF 108


>UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae
           bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
           bacterium TAV2
          Length = 400

 Score = 62.9 bits (146), Expect = 7e-09
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 29/156 (18%)
 Frame = +2

Query: 26  AFLTLLERKVLGYIQIRKGPNKVGF---------------IGLLQPFSDAIKLFTKERTY 160
           A  ++ ERK+  +IQ R GPN+                   G++Q  +D  K   KE   
Sbjct: 34  AACSMAERKIAAWIQDRPGPNRTATPLLMWIPILGPLLKRFGVMQLMADGGKFLFKEDPV 93

Query: 161 PNFSNYFCYYFSPVFRFIXXXXXXXXIP---YIYN-----------LICFNLGILFFLCL 298
           P F     +  +P+   I        +P   YI N           L   ++G+L    +
Sbjct: 94  PAFVEKLYFIAAPIVAMIPALCTVVIVPFSAYIANINGTPTLVPVMLANVDVGLLAVFAV 153

Query: 299 TSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
           +SL VY  I+AGW+S+S Y+ LGG+R+ AQ ISYE+
Sbjct: 154 SSLAVYSQILAGWASHSKYSFLGGVRASAQIISYEL 189


>UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5;
           Actinomycetales|Rep: NADH dehydrogenase subunit NuoH2 -
           Streptomyces coelicolor
          Length = 322

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVG-FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 220
           E KV+ ++Q R GP   G F G  Q  +D +K   KE   P  ++   +  +P    +  
Sbjct: 29  EHKVMAHMQGRLGPMYAGGFHGWAQLVADGVKFAQKEDVVPADADRRIFQLAPAVALLPY 88

Query: 221 XXXXXXIPY------IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 382
                 IP       +  ++  + G+ F L +  +GV   ++AGWSS + ++LLGGLR+ 
Sbjct: 89  LLVLLAIPVGPGEGAVGQVV--DAGVFFVLAVMGVGVLGSLMAGWSSANKFSLLGGLRTA 146

Query: 383 AQTISYEV 406
           AQ ++YE+
Sbjct: 147 AQLLAYEL 154


>UniRef50_A3H7X8 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Caldivirga maquilingensis IC-167|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Caldivirga maquilingensis IC-167
          Length = 361

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSN 175
           ++G+ I + F+   ERK    +Q R GP ++     G++QP SD I+   +E      ++
Sbjct: 47  LIGLFIPLIFVIWWERKAAARVQWRYGPLEISRRIGGVIQPISDLIRYTLQEIIIHQEAD 106

Query: 176 YFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNS 349
              +   PVF FI        +P   ++   N G  IL    L S+   ++I++GW+S  
Sbjct: 107 EAYFLHMPVFGFIFALLPVLFLPAGPHVYAINTGYNILIAAVLISIFNIVIIVSGWASTD 166

Query: 350 NYALLGGLRSVAQTISYEV 406
            +A +G +R      +YEV
Sbjct: 167 KWAYIGTVREAFMYAAYEV 185


>UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;
           n=2; Anaeromyxobacter|Rep: NADH dehydrogenase (Quinone)
           precursor - Anaeromyxobacter sp. Fw109-5
          Length = 450

 Score = 60.1 bits (139), Expect = 5e-08
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
 Frame = +2

Query: 11  VLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQ---PF--SDAIKLFTKERTYPN--- 166
           +++  + LT+ ERK    IQ R G N++  +G      PF  +DA+K+ TKE   P    
Sbjct: 61  MMVSGSLLTVAERKWSAMIQNRIGANRIRVMGSALGGIPFLAADALKMLTKESAEPRGRT 120

Query: 167 ---FSNYFCYYFSPVFRFIXXXXXXXXIPY----------------IYNLICFNLGILFF 289
              F       F+PVF           IP                    +   + G+L+ 
Sbjct: 121 RVLFELAPALAFAPVFALFAIIPVGPSIPLGSLVDGAAGALGSAGVALQVASIDAGLLYI 180

Query: 290 LCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
             ++SL VY   +AGW+SN+   LLGG+R+ +Q +SYEV
Sbjct: 181 FAISSLAVYGTSLAGWASNNKLGLLGGVRASSQMMSYEV 219


>UniRef50_A1RZ42 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Thermofilum pendens (strain Hrk 5)
          Length = 322

 Score = 59.7 bits (138), Expect = 6e-08
 Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
 Frame = +2

Query: 8   GVLIGVA---FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNY 178
           G+L  VA   +   LERKV   IQ R GP   G  GLLQP  D  KL  KE   P +++ 
Sbjct: 13  GLLFTVAMGFWFEYLERKVTARIQRRVGPLYAGPHGLLQPVYDFFKLLLKEEIVPGWTDV 72

Query: 179 FCYYFSPVFRFIXXXXXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 352
           F +  +P+            +P      L+ F         L +LGV  + + G+S  S 
Sbjct: 73  FTFRVAPILAVTIPVFGMCVLPVASTKGLLSFEGDFALVFLLLALGVLTLSLTGYSVLSP 132

Query: 353 YALLGGLRSVAQTISYE 403
           Y  +G  R + Q   YE
Sbjct: 133 YTAIGVGRLLVQYSMYE 149


>UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
           Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
           chain H - Sulfurovum sp. (strain NBC37-1)
          Length = 317

 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
 Frame = +2

Query: 47  RKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXX 226
           RK +  +  R GP+  G  G  Q   D  KL +KE   P   N + +   P+   I    
Sbjct: 28  RKFMAPLHKRVGPHFNGLAGSYQTLFDLSKLLSKESITPEGVNPYLFSMMPLIALIVAML 87

Query: 227 XXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISY 400
               IP+   Y  I    G+L  + L  +  +++ + G+ S++ Y+ LGG+R + Q IS 
Sbjct: 88  PAAFIPWTASYPAIPSAFGLLALIVLIGIEPFLLFLTGFGSDNKYSFLGGIRVLTQAISM 147

Query: 401 E 403
           E
Sbjct: 148 E 148


>UniRef50_Q2WGD5 Cluster: NADH dehydrogenase subunit 1; n=1;
           Selaginella uncinata|Rep: NADH dehydrogenase subunit 1 -
           Selaginella uncinata (Blue spikemoss) (Peacock
           spikemoss)
          Length = 331

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +2

Query: 17  IGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFS 196
           +G      LERK+   IQ R GP   G +G++Q  +D +K   KE   P+  + + +   
Sbjct: 1   MGAPVTARLERKISAGIQQRIGPGYAGPLGIIQALADGVKPLFKEDIIPSKGDPWSFSIG 60

Query: 197 PVFRFIXXXXXXXXIPYIYNLICFN--LGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 370
           P             IP  ++++  +   G+   +  +S+      + G+ SN+ Y+  GG
Sbjct: 61  PAMVIAPVPVGHSVIPSGHSIVLADPGTGVPSRIAASSIAPLGPPMTGYGSNNKYSFSGG 120

Query: 371 LRSVAQTISYEV 406
            R+ AQ+ SYE+
Sbjct: 121 PRAAAQSTSYEI 132


>UniRef50_A3DMA3 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Staphylothermus marinus F1|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
           F1)
          Length = 330

 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L ++I + F   + RKV G +Q R+GP  VG  GLLQPF+D +KL  KE     +S   
Sbjct: 19  LLFIIIMIIFTQWIYRKVTGRVQYRRGPTYVGPFGLLQPFADFMKLLLKEDVVSRYSAKI 78

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLI--CFNLGILFFLCL-TSLGVYIVIIAGWSSNSN 352
                               P  Y+ +   F++ + F+L L TSL    ++  G ++ + 
Sbjct: 79  APVIVAALGVGAITALTLMTPLAYDPVHAPFDIIVFFYLALWTSLS---IMFLGLATPNP 135

Query: 353 YALLGGLRSVAQTISYE 403
           Y  LG  R +A  +S E
Sbjct: 136 YTSLGVGRYMALLVSAE 152


>UniRef50_A1AUU5 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=2; Pelobacter propionicus DSM
           2379|Rep: Respiratory-chain NADH dehydrogenase, subunit
           1 precursor - Pelobacter propionicus (strain DSM 2379)
          Length = 313

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           +RK+   +Q R+GP         QPF+D IKL +KE   P  ++ F +   P+       
Sbjct: 28  DRKLYARMQNRQGPP------WFQPFADFIKLSSKEDIIPEEADPFMFRLMPLVALAASV 81

Query: 224 XXXXXIPYIYN--LICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 397
                IP      L+ F   ++  + L ++      +AGW S S Y+++G +RS+ Q ++
Sbjct: 82  CAILYIPIWGRGALLSFEGDLVIVVYLLTIPTMTFFLAGWYSASLYSMIGAVRSLTQLLA 141

Query: 398 YEV 406
           YEV
Sbjct: 142 YEV 144


>UniRef50_A3DJU0 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=2; cellular organisms|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 291

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+  L+G   LT ++R +   +Q RKGP+      +LQPF D +KLF KE    N  + F
Sbjct: 16  IVAPLLG-GLLTGIDRVITARMQGRKGPS------VLQPFYDVLKLFQKESIEVNTMHRF 68

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNY 355
             Y S +F              I+  +   LG  IL  L   +LG    ++ G++SNS Y
Sbjct: 69  FVYISLIF-------------VIFTTVIMLLGGDILLALFALTLGSIFFVLGGYASNSPY 115

Query: 356 ALLGGLRSVAQTISYE 403
           + +G  R + Q +++E
Sbjct: 116 STIGSERELLQMMAFE 131


>UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=16; Coelomata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Nyctalus leisleri (Leisler's bat)
          Length = 299

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVG 97
           I+ +L+ VAFLTLLERKVLGY+Q+RKGPN VG
Sbjct: 10  IIPILLAVAFLTLLERKVLGYMQLRKGPNIVG 41



 Score = 38.7 bits (86), Expect = 0.12
 Identities = 27/83 (32%), Positives = 28/83 (33%)
 Frame = +2

Query: 356 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 535
           AL+G L    QT  YEV                        QE                 
Sbjct: 128 ALIGALXXXXQTXXYEVTLAIIILSILLMNGSFTLSTLITTQEYTWLILPSWPLAMMWFI 187

Query: 536 XXXAETNRTPFDFAEGERELVSG 604
              AETNR PFD  EGE ELVSG
Sbjct: 188 STLAETNRAPFDLTEGESELVSG 210


>UniRef50_Q94YW8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=15; Digenea|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Steringophorus haedrichi
          Length = 157

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
 Frame = +2

Query: 92  VGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFN 271
           VG +GLLQ F+D +KL  K +   + S  +  +   +              + Y + C +
Sbjct: 1   VGIVGLLQSFADFLKLIIKVKLAGSQSRSWLSWGGVILLVFLSCAYC----FFYAVACLH 56

Query: 272 LG----ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYE 403
           +G    +L+FL +TS+  Y ++  GW S + YALL  +RS   ++++E
Sbjct: 57  IGGSNVLLWFLVITSITGYSLLAVGWGSYNKYALLSSIRSALGSVTFE 104


>UniRef50_A3MXU6 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=3; Pyrobaculum|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1
           precursor - Pyrobaculum calidifontis (strain JCM 11548 /
           VA1)
          Length = 324

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSN 175
           I G+L  +      ERK++  +Q R GP  V     G LQP +D IKL   E   P  +N
Sbjct: 18  IAGILGFLVVAIWAERKLVARVQWRYGPLYVSKPLGGFLQPIADLIKLVFSELVLPRHTN 77

Query: 176 YFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAG--WSSNS 349
              +  +P+  F+        I     L+ F+      L + +  +  V + G  W+   
Sbjct: 78  RHLFALTPLLLFVAEAVPVVFIAVAPGLVIFHHSYGLALAVVTWLLIPVFLVGMAWAEAD 137

Query: 350 NYALLGGLRSVAQTISYEV 406
            +  +G +R +  T +YEV
Sbjct: 138 KFTYIGAVREILLTAAYEV 156


>UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;
           Halobacteriaceae|Rep: NADH dehydrogenase/oxidoreductase
           - Haloarcula marismortui (Halobacterium marismortui)
          Length = 347

 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           +RK+      R   +++G  GL    +DA++L +KE   P   +   +  +P+       
Sbjct: 51  KRKITAAFTDRIAVDRIGPYGLFIIVADAVRLLSKELIVPEGVDRPAWDLAPLIIASTAL 110

Query: 224 XXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 397
                IP     +L    +G+ +   + S     +++AG++SN+ Y+ LGGLR+VAQ ++
Sbjct: 111 LGFAVIPMGNGIHLADPEVGLAYVFAVASTTSIGLVMAGYASNNKYSFLGGLRAVAQNLA 170

Query: 398 YEV 406
           YE+
Sbjct: 171 YEI 173


>UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Halorubrum lacusprofundi ATCC 49239
          Length = 357

 Score = 52.4 bits (120), Expect = 9e-06
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
 Frame = +2

Query: 44  ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 223
           +RK+      R   N++G  GLL   + A++L  KE   P   +   +  +P+       
Sbjct: 52  KRKITAAFTDRIAVNRIGPFGLLIIPAAAVQLLAKELIIPEGVDRPTWDIAPILLPASAM 111

Query: 224 XXXXXIPY------IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 385
                IP         +L    +G+       S+    +++AG++SN+ Y+LLGGLR+VA
Sbjct: 112 LGFSVIPMGQIGPLNIHLADPEVGLALVFAFASIASVSLVMAGYASNNKYSLLGGLRAVA 171

Query: 386 QTISYEV 406
           Q ++YE+
Sbjct: 172 QNLAYEI 178


>UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=9; Digenea|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Opisthorchis viverrini
          Length = 226

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 50/115 (43%)
 Frame = +2

Query: 263 CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXX 442
           C ++ +L+ L +TSL  Y V+  GW S + +AL+  +RS   ++++E             
Sbjct: 31  CNSVMLLWLLLVTSLTGYSVLSIGWGSYNKFALISCVRSAFSSVTFEACFMCVIVICALV 90

Query: 443 XXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGI 607
                   F L +E                     E NRTP D+AE E ELVSG+
Sbjct: 91  CGNYGS--FVLLEEFWGVGLVVPVCYVVWLVGMLCECNRTPLDYAEAESELVSGL 143


>UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Thermofilum pendens (strain Hrk 5)
          Length = 337

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 7/206 (3%)
 Frame = +2

Query: 8   GVLIGVAFLTLL---ERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFS 172
           G+L  +A L ++   ERK+   +Q+R GP  V   F G+LQ  +D  +   +E   P  +
Sbjct: 24  GLLTALAVLLIVIWAERKIAARVQMRVGPLYVTRHFGGVLQMLADGTRYMFQEFIVPETA 83

Query: 173 NYFCYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSN 346
           +   Y  +P             IP    +  +     +   L + +     V++ GWSSN
Sbjct: 84  DKVPYMLAPALALTLAIAPFALIPSAPGFAPVKSPYSLPALLAILASTPLSVLLMGWSSN 143

Query: 347 SNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXX 526
           + +++ G +R    T++YEV                      + ++              
Sbjct: 144 NKFSIQGAVREAFMTLAYEVPLFLSALSMAILYGSMDLEEI-VGRQFLPGALLNPVAAFT 202

Query: 527 XXXXXXAETNRTPFDFAEGERELVSG 604
                   + R PFD  EGE+E+V+G
Sbjct: 203 FFVAMVMSSGRLPFDIVEGEQEIVAG 228


>UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=1;
           Ignicoccus hospitalis KIN4/I|Rep: NADH dehydrogenase
           (quinone) - Ignicoccus hospitalis KIN4/I
          Length = 355

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 55/216 (25%), Positives = 78/216 (36%), Gaps = 28/216 (12%)
 Frame = +2

Query: 41  LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 220
           +ERK+ G I  R GP  VG+ GLLQ  +D +K  +KE   P   N   YY  P+      
Sbjct: 32  MERKMWGKIMQRYGPTHVGYAGLLQLIADFLKYLSKELFAPRRPNKLFYYGLPLLLIAII 91

Query: 221 XXXXXXIPYIY----------NLICFNLGILFFLCLTSL-----GV----YIVIIA---- 331
                 IP  Y           L   N+ +  +     L     GV    Y+ ++A    
Sbjct: 92  SIPLVLIPLDYVALSGLEGLLKLAGINVNLSDYAASKLLDELAPGVGLLGYVAVVAVTMP 151

Query: 332 -----GWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXX 496
                 W+  + Y  LG  R+V   ++YEV                  Y    +Q+    
Sbjct: 152 LMYMLSWNQANKYGALGAFRTVLLLVTYEV-PFLIAIAAVAALGGLSFYGVVDFQKSAWL 210

Query: 497 XXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSG 604
                           AE+ R PFD  E E+E+V G
Sbjct: 211 ALLNPIAALVLFITLLAESERPPFDHPEAEQEIVHG 246


>UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa
           subunit, putative; n=4; Archaea|Rep: F420H2:quinone
           oxidoreductase, 41.2 kDa subunit, putative -
           Archaeoglobus fulgidus
          Length = 369

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 8/208 (3%)
 Frame = +2

Query: 5   LGVL-IGVAFLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSN 175
           LGVL + + ++   ERK+   IQ R GP +V     G +Q  +D I+ F +E      ++
Sbjct: 60  LGVLTLYLLYIVWYERKLTARIQWRVGPLEVARPIRGAIQALADGIRYFFQEAIVHREAH 119

Query: 176 YFCYYFSPVFRFIXXXXXXXXIPY-----IYNLICFNLGILFFLCLTSLGVYIVIIAGWS 340
              +   P+  FI        IP      IY      L + F   +  + + IV I GW+
Sbjct: 120 RPYFVQLPILAFIPVLLPIMFIPAGSAVGIYTPNAIQLTVTF---IALIPITIVAI-GWA 175

Query: 341 SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 520
           SNS +A +G +R      +YEV                  Y     Q             
Sbjct: 176 SNSRFAYIGSVREAFMYFAYEVPFIIAVISMIFLYGSGDAYVAVEKQSAIPGALLNPIAF 235

Query: 521 XXXXXXXXAETNRTPFDFAEGERELVSG 604
                     T+R PF+  E ++E+  G
Sbjct: 236 IVYLIAMLMATSRLPFEIPEADQEIAFG 263


>UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4;
           Sulfolobaceae|Rep: NADH dehydrogenase subunit H -
           Sulfolobus solfataricus
          Length = 352

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
 Frame = +2

Query: 8   GVLIGVAFLTL---LERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFS 172
           G++  + FL +    ERK    +Q+R GP        G+LQ F+DAIK    E   PN  
Sbjct: 24  GLIFTLIFLLVTIWFERKAAAIVQLRYGPYYASKRLGGILQLFADAIKFVFSEIIIPNGV 83

Query: 173 NYFCYYFSPVFRFIXXXXXXXXIPY-----------IYNLICFNL----GIL--FF---- 289
           N   Y  SPV   I        IP            +Y+ I ++     GIL  +F    
Sbjct: 84  NQTLYAISPVLVLIFAFLPMALIPISTIPTQGSILSVYHGIFYDTQIHQGILVPYFIEYN 143

Query: 290 ----LCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
               + L SL   +VI   W++N+ +A++G +R    ++SY+V
Sbjct: 144 LIGIIALESLYPILVIFLAWNTNNRFAIVGSIREAYLSVSYDV 186


>UniRef50_Q8ZWX0 Cluster: NADH-ubiquinone oxidoreductase subunit;
           n=4; Pyrobaculum|Rep: NADH-ubiquinone oxidoreductase
           subunit - Pyrobaculum aerophilum
          Length = 349

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
 Frame = +2

Query: 23  VAFLTLL--ERKVLGYIQIRKGPNKVGFI--GLLQPFSDAIKLFTKERTYPNFSNYFCYY 190
           V  LT++  ERK    +Q+R GP  V  +  G LQ  +DA K    E   P  ++   + 
Sbjct: 30  VILLTVVWFERKAAARVQMRVGPYHVSPLLGGYLQLLADAFKFIISEPIVPRGAHKVLFV 89

Query: 191 FSPVFRFIXXXXXXXXIPYIYNLICFN------LGILFFLCLTSLGVYIVIIAGWSSNSN 352
           + P             +P    L           G +F L +  L   I++I GWS N+ 
Sbjct: 90  WGPPIFVTLAFGASLLLPLTPELRLIKDAGLLPYGFVFSLVILLLVSIIIVIIGWSVNNK 149

Query: 353 YALLGGLRSVAQTISYEV 406
           +A +G  R      +YE+
Sbjct: 150 FAYIGAAREALLVAAYEI 167


>UniRef50_A1RWL7 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Thermofilum pendens (strain Hrk 5)
          Length = 312

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 11/213 (5%)
 Frame = +2

Query: 2   ILGVLIGVAFLTL------LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKER-TY 160
           ++GV+ GV  + L      ++RK++  +Q+RKGP       ++QP+ D +KL++K++ + 
Sbjct: 7   LVGVVQGVCLVLLAPLAYGIQRKIIARLQLRKGP------PVIQPYRDLLKLWSKDKLSV 60

Query: 161 PNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWS 340
           P  S++  Y  +P+            IP   N+      I   +   +L  +++ IA   
Sbjct: 61  PEVSSWI-YMATPLLYLAITVVIAMSIPVFVNMGIPLADIFLLIYSLALARFVLSIASLD 119

Query: 341 SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFY----LYQEXXXXXXXX 508
           + S  A  G  R  A  +  EV                  Y       L  E        
Sbjct: 120 TGSPLAAAGAWRENAAAVVIEVPMLFAALLPALEGGSSSLYAVVSHTCLRWETFIARPSY 179

Query: 509 XXXXXXXXXXXXAETNRTPFDFAEGERELVSGI 607
                       AE    PFD AE E+E+  G+
Sbjct: 180 IVAALAFFVCMLAEAGVLPFDVAEAEQEIQEGL 212


>UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=20; Trypanosomatidae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Leishmania tarentolae
           (Sauroleishmania tarentolae)
          Length = 313

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTK 148
           IL VLI   F++L ER++L  +QIR GP  + F G+L P +D IKLF K
Sbjct: 14  ILVVLILTGFVSLCERRILALVQIRIGP-ALCFFGILTPITDGIKLFIK 61


>UniRef50_Q9YC30 Cluster: NuoH homolog; n=1; Aeropyrum pernix|Rep:
           NuoH homolog - Aeropyrum pernix
          Length = 375

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
 Frame = +2

Query: 8   GVLIGVAFLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           G L+        ERK    +Q R GP        GLL   +D ++   ++   P   +YF
Sbjct: 26  GALLIAIVAVWFERKAAARVQRRIGPYWASPRLGGLLHLVADMMRYMFQQVIIPRTVDYF 85

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNL-------GILFFLCLTSLGVYIVIIAGWS 340
            +  +P+            +P   N   + L        +L  L +++L    +I+AGW+
Sbjct: 86  PFLVAPIVGMAVSILPFAVVPLTANPSYWPLPPGLMEYSLLLALAISTLPPIFLIVAGWA 145

Query: 341 SNSNYALLGGLRSVAQTISYEV 406
           +N+ + ++GG+R     ++YE+
Sbjct: 146 ANNPFTIVGGVREAFIILAYEL 167


>UniRef50_A4XJP3 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=2; Clostridiales|Rep: Respiratory-chain
           NADH dehydrogenase, subunit 1 - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 286

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 35/134 (26%), Positives = 60/134 (44%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I+  +IG   LT ++RK+   +Q R GP       +LQPF D  KLF+KE    + +   
Sbjct: 12  IIAPIIG-GILTGIDRKITARMQNRFGPP------ILQPFYDLFKLFSKETIVVSSTQIL 64

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
             +   VF  +              +    + +L  L + +  V  +I+   S+NS Y+ 
Sbjct: 65  YAFLFLVFNMVALV-----------MFVLKMDLLLILFVLAFAVTALILGAMSTNSPYSR 113

Query: 362 LGGLRSVAQTISYE 403
           +G  R +   ++YE
Sbjct: 114 IGAHRELISVLAYE 127


>UniRef50_Q8RDB7 Cluster: NADH:ubiquinone oxidoreductase subunit 1;
           n=1; Thermoanaerobacter tengcongensis|Rep:
           NADH:ubiquinone oxidoreductase subunit 1 -
           Thermoanaerobacter tengcongensis
          Length = 283

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 37/134 (27%), Positives = 59/134 (44%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL  +IG  FL+ ++RK+  +IQ R GP       + QPF D +KL  K++   N    F
Sbjct: 13  ILAPIIG-GFLSGIDRKLTAFIQGRYGPP------IWQPFYDIVKLLYKQKILVNNFQVF 65

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
             Y   +   +              L      +L  L + S+G+   I    S+ S Y+ 
Sbjct: 66  SAYMYLLTAILS-----------VGLFAIKADLLMILFVMSVGLVFYIAGALSTKSPYSQ 114

Query: 362 LGGLRSVAQTISYE 403
           +G  R + Q ++YE
Sbjct: 115 VGAQRELMQMLAYE 128


>UniRef50_P77937 Cluster: CooK; n=8; Bacteria|Rep: CooK -
           Rhodospirillum rubrum
          Length = 323

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           I  + +G+A L   +R+V   +Q R G        LLQPF D +KL TK    P  +N  
Sbjct: 22  IFAITLGLA-LKGFDRRVFARLQRRVGAP------LLQPFYDVLKLMTKRTLVPENANLV 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPY--IYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 355
            +   P+            IP   +Y+       +L    L S+   ++++AG +S S +
Sbjct: 75  VFLMVPLLGLASMGVAAAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGSASGSPF 134

Query: 356 ALLGGLRSVAQTISYE 403
             +G  R +A  ++YE
Sbjct: 135 GGIGFSREMAIMLAYE 150


>UniRef50_A5FW44 Cluster: Formate hydrogenlyase subunit 4-like
           protein; n=1; Acidiphilium cryptum JF-5|Rep: Formate
           hydrogenlyase subunit 4-like protein - Acidiphilium
           cryptum (strain JF-5)
          Length = 317

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = +2

Query: 104 GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLG 277
           G+LQP+ D  KLF K+   P  +++  ++ +PV  F         IP +  Y L   N+G
Sbjct: 41  GVLQPYRDLWKLFHKDIVVPETASWL-FWVTPVVAFTCMMTVPILIPVLTNYPLPLSNMG 99

Query: 278 -ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 379
            IL    + +LG +++ +AG  + S Y  +G  R+
Sbjct: 100 DILGGGLILTLGSFMITLAGLDTGSAYGGIGSSRA 134


>UniRef50_Q0W3I4 Cluster: Ech hydrogenase, subunit B; n=1;
           uncultured methanogenic archaeon RC-I|Rep: Ech
           hydrogenase, subunit B - Uncultured methanogenic
           archaeon RC-I
          Length = 306

 Score = 42.3 bits (95), Expect = 0.010
 Identities = 36/134 (26%), Positives = 60/134 (44%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           IL  +IG   L  ++RK+   +Q R+GP       ++QPF D  KLF KE    N  N  
Sbjct: 25  ILSPIIG-GLLMGIDRKLTARLQNRRGPP------IVQPFYDVFKLFGKE---DNVMNKA 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
              F   ++          +     L+ F   +L    +  L    +++AG+S  S ++ 
Sbjct: 75  YLVFGLAYQ--------TTVVLSLALLLFEYDLLVIAFVFGLSFIFLVLAGYSVRSQFSY 126

Query: 362 LGGLRSVAQTISYE 403
           +G  R + Q ++YE
Sbjct: 127 IGSNRELLQMMTYE 140


>UniRef50_Q8TY38 Cluster: Membrane protein related to formate
           hydrogenlyase subunit 4; n=1; Methanopyrus kandleri|Rep:
           Membrane protein related to formate hydrogenlyase
           subunit 4 - Methanopyrus kandleri
          Length = 283

 Score = 41.5 bits (93), Expect = 0.017
 Identities = 43/121 (35%), Positives = 54/121 (44%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           L+G  FL L  RKV+  IQ R GP       ++Q F   +K   KE   P  S  F Y+ 
Sbjct: 15  LVGSVFLGL-HRKVMARIQRRPGPP------IVQEFLHTLKFMLKEGYAPLTSAEFLYWM 67

Query: 194 SPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 373
            PVF  I        I  +Y     NL + FF    S  V +   AG SS S Y  +GG+
Sbjct: 68  VPVFNVI-IWSAAVTISAVYR---GNL-LPFFALYASYKV-LSHGAGVSSGSTYTKIGGV 121

Query: 374 R 376
           R
Sbjct: 122 R 122


>UniRef50_Q7WT81 Cluster: EchB; n=3; Desulfovibrio|Rep: EchB -
           Desulfovibrio gigas
          Length = 284

 Score = 41.1 bits (92), Expect = 0.023
 Identities = 32/124 (25%), Positives = 59/124 (47%)
 Frame = +2

Query: 32  LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 211
           +T ++R++   +Q R GP       +LQPF D  KL  KE+   N    FC Y      +
Sbjct: 24  ITGVDRRITARLQSRLGPP------ILQPFYDVAKLLGKEKLLNNSWQAFCAYV-----Y 72

Query: 212 IXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 391
           +        + ++ +    +L ++FF  + ++G   ++I   S  S Y+ +G  R + Q 
Sbjct: 73  LVAAATSVVLFFLQS----DLLLIFF--VQAVGAVFLVIGAMSVPSPYSQIGAQRELIQV 126

Query: 392 ISYE 403
           ++YE
Sbjct: 127 LTYE 130


>UniRef50_A0UXN8 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Clostridium cellulolyticum H10|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Clostridium cellulolyticum H10
          Length = 312

 Score = 40.3 bits (90), Expect = 0.040
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGP--NKVGFIGLLQPFSDAIKLFTKERTYPNFSN 175
           IL  +  + FL L+     G I+  K    +K+G   + QP+ D IKL  K+    + S+
Sbjct: 5   ILKFIFQMIFLLLIAPLFTGIIRKIKSKIQHKIG-ASIFQPYYDLIKLLKKDLVVSSTSS 63

Query: 176 YFCYYFSPVFRFIXXXXXXXXIPYIYNL--ICFNLGILFFLCLTSLGVYIVIIAGWSSNS 349
           +  Y  +P   FI        +P IY      F   +L  + L   G   + +AG  + S
Sbjct: 64  WI-YTVAPYVYFITSLAAAMCLPIIYQFKGFSFYTDLLVIVYLLVAGRIFMALAGLDTGS 122

Query: 350 NYALLGGLRSV 382
            +  +G  R +
Sbjct: 123 TFGGMGSSREL 133


>UniRef50_A6DB52 Cluster: HYDROGENASE-4 COMPONENT C; n=3;
           Epsilonproteobacteria|Rep: HYDROGENASE-4 COMPONENT C -
           Caminibacter mediatlanticus TB-2
          Length = 308

 Score = 39.5 bits (88), Expect = 0.070
 Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 7/209 (3%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L V+    F   + R +   +Q RKGP         Q + D  KLF + R YP  + ++
Sbjct: 12  VLAVVAVAPFFDGVARMIRAKMQARKGPPDP-----FQTYRDLYKLFKRGRVYPK-NAHW 65

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFL-CLTSLGVYIVIIAGWSSNSN-- 352
            + ++P   F         +P  Y    F  G++  L  +  LG +   I G +SN +  
Sbjct: 66  VFKYAPYIMFGVVATMLAALPITY-ATDFKAGVVSDLFVILYLGAFFRFIFGVASNDSGN 124

Query: 353 -YALLGGLRSVAQTISYE---VRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 520
            +A +GG R     +  E   V                   +   + +            
Sbjct: 125 AFAAIGGSREQMIGVFVEPVIVLCLIVVMLLAKTSNLVEIQYMVKHWQIGYIYPSFAIAS 184

Query: 521 XXXXXXXXAETNRTPFDFAEGERELVSGI 607
                    E  R P+D AE E+EL  G+
Sbjct: 185 IAFLWAIYVEMARNPYDLAEAEQELQEGV 213


>UniRef50_Q8THY9 Cluster: Hydrogenase-3 subunit; n=7; cellular
           organisms|Rep: Hydrogenase-3 subunit - Methanosarcina
           acetivorans
          Length = 313

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFC 184
           L  L+       L RKV  Y Q RKGP       L Q + D  KL  KE  Y   S++  
Sbjct: 14  LFALLAAPLYMALIRKVKAYAQWRKGPR------LFQVYYDLKKLMQKEAVYSPTSSW-V 66

Query: 185 YYFSPVFRFIXXXXXXXXIPYIY-NLICFNLG-ILFFLCLTSLGVYIVIIAGWSSNSNYA 358
             F+P             +P I+       LG I+ FL L +L  +   + G  + S + 
Sbjct: 67  MRFTPYLNLSTLLVCSLFVPLIFVPEPAGGLGNIIVFLYLLALERFFTALGGLDAGSAFG 126

Query: 359 LLGGLRSVA 385
            +G  RS++
Sbjct: 127 GMGSSRSMS 135


>UniRef50_Q3JDU8 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=2; Proteobacteria|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1
           precursor - Nitrosococcus oceani (strain ATCC 19707 /
           NCIMB 11848)
          Length = 310

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +2

Query: 185 YYFSPVFRFIXXXXXXXXIPYIYNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 358
           YY  PV   +        IP+  +L+    N+G+ +F+ +    V  + + GW +N+  +
Sbjct: 57  YYAGPVIACMGVSWAMVCIPFSPSLVGNDVNIGLFYFIVVVDFVVLGIALGGWGANTPDS 116

Query: 359 LLGGLRSVAQTISYEV 406
           +    R++AQ I+Y +
Sbjct: 117 VESCYRAIAQLIAYVI 132


>UniRef50_Q0FXV6 Cluster: NuoH2 NADH chain H; n=1; Fulvimarina
           pelagi HTCC2506|Rep: NuoH2 NADH chain H - Fulvimarina
           pelagi HTCC2506
          Length = 305

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = +2

Query: 113 QPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIYNLICF--NLGILF 286
           +P +DA +L   +R      +   ++ +PV            IP+   L+     +GI+ 
Sbjct: 41  RPIADAARLLQTQRIRTEAPDALLWFLAPVLYLALAIIGLAVIPFGPGLVTIPSEVGIVV 100

Query: 287 FLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 385
           +    +L +  V + GWS+N+   L+G  R VA
Sbjct: 101 WGSCEALTIVAVFMFGWSANAPLPLIGAYRYVA 133


>UniRef50_UPI00015BC866 Cluster: UPI00015BC866 related cluster; n=1;
           unknown|Rep: UPI00015BC866 UniRef100 entry - unknown
          Length = 305

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
 Frame = +2

Query: 5   LGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIG--LLQPFSDAIKLFTKERTYPNFSNY 178
           +G+L  V F+ L    + G+I   K  N  G  G  +LQP+ D IKLF KE      ++ 
Sbjct: 6   IGILQIVIFIALAPA-IKGFIHKIK-LNLRGQKGPSILQPYKDLIKLFRKEPVISKDAS- 62

Query: 179 FCYYFSPVFRFIXXXXXXXXIPYI--YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 352
           F    +P+   +        IP      L+ F   ++ F+ +  L  + + + G    S+
Sbjct: 63  FISKIAPIVVLLATIISASFIPIFSPNTLLSFTGDVIAFMYVLGLSTFFIALYGLDQGSS 122

Query: 353 YALLGGLRSV 382
           +  LG  R +
Sbjct: 123 FGGLGSAREM 132


>UniRef50_A3Q532 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=4; Actinomycetales|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1
           precursor - Mycobacterium sp. (strain JLS)
          Length = 312

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 15/52 (28%), Positives = 32/52 (61%)
 Frame = +2

Query: 251 YNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
           + L+  ++G+++   +  +   +V +AGW  NS ++L+GG R +A  + YE+
Sbjct: 96  WTLLDIDVGVMWVNAVDVMMWAVVWLAGWGPNSVHSLIGGYRFLAHALGYEL 147


>UniRef50_Q57940 Cluster: Putative NADH-ubiquinone oxidoreductase
           MJ0520; n=8; Euryarchaeota|Rep: Putative NADH-ubiquinone
           oxidoreductase MJ0520 - Methanococcus jannaschii
          Length = 295

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 33/123 (26%), Positives = 55/123 (44%)
 Frame = +2

Query: 14  LIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 193
           L+G + L  L RK++  IQ R GP       ++Q     +K + KE T+P  +       
Sbjct: 20  LVG-SLLLGLHRKIMARIQGRPGPP------IIQYLLHTLKFYVKEITFPITAG------ 66

Query: 194 SPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 373
           +P++ F+        +  +   I F   +L  + +  L   +    G SS S Y  +GG+
Sbjct: 67  NPLYIFVALLDIAIWLAALIIAIDFKSSLLIIIGIYVLQKIVEHGCGLSSGSPYGKIGGV 126

Query: 374 RSV 382
           RSV
Sbjct: 127 RSV 129


>UniRef50_Q1AZS1 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=2; Bacteria|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1
           precursor - Rubrobacter xylanophilus (strain DSM 9941 /
           NBRC 16129)
          Length = 303

 Score = 36.3 bits (80), Expect = 0.65
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
 Frame = +2

Query: 65  IQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIP 244
           + + +G +  G +    P   A  L  +E   P   +   +  +P+   +        +P
Sbjct: 22  VAVLEGWSATGRLRPAGPAVSAAALLGRESVVPRRPDRVLFEAAPLLLLVSAVLAAAVLP 81

Query: 245 YIYNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 406
               L+  +L  G LF     +  +  +++AGW  ++ YA++ G R + Q + Y +
Sbjct: 82  LSPRLVVADLATGALFVNAALAYVMVALLMAGWGPDAAYAMVAGWRFLGQLLGYSM 137


>UniRef50_A5G4V9 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1 precursor; n=3; cellular organisms|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1
           precursor - Geobacter uraniumreducens Rf4
          Length = 293

 Score = 35.9 bits (79), Expect = 0.86
 Identities = 40/134 (29%), Positives = 59/134 (44%)
 Frame = +2

Query: 2   ILGVLIGVAFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYF 181
           +L  L G   L  ++RKV   +Q R GP       ++QPF D  KL  KER   N    F
Sbjct: 22  LLAPLAG-GLLAGIDRKVSARLQGRYGPP------VMQPFYDVFKLLRKERIIVNKFQDF 74

Query: 182 CYYFSPVFRFIXXXXXXXXIPYIYNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 361
                P+  F+        + +    +   L I+F L L   G + V + G+   S Y+ 
Sbjct: 75  -----PIVLFLLFTMFSGALFFAGADL---LLIIFSLALA--GTFFV-LGGYCVASPYSH 123

Query: 362 LGGLRSVAQTISYE 403
           LG  R + Q ++YE
Sbjct: 124 LGAEREIIQMVAYE 137


>UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 80

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 603 PETNSLSPSAKSKGVRFVSA 544
           P+TNS SPS KSKG RFVSA
Sbjct: 31  PDTNSDSPSVKSKGARFVSA 50


>UniRef50_Q37142 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; cellular organisms|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Artemia parthenogenetica (Brine
           shrimp)
          Length = 22

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 104 GLLQPFSDAIKLFTKERTYP 163
           G+LQPFSD IKLF+KE + P
Sbjct: 1   GVLQPFSDGIKLFSKEVSLP 20


>UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Artemia salina|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Artemia salina (Brine shrimp)
          Length = 130

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 545 AETNRTPFDFAEGERELVSG 604
           AETNRTPFD AEGE ++  G
Sbjct: 2   AETNRTPFDLAEGECQVSVG 21


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,860,623
Number of Sequences: 1657284
Number of extensions: 4686575
Number of successful extensions: 12771
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 12259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12636
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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