Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1040
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 45 7e-05
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 33 0.17
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 33 0.22
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041) 30 1.6
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGFIVRVSRSSHPFKV 456
LN FGSS ASSAYQ WPT + H +SGF SR+S+ FKV
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -1
Query: 269 NRYGPPSGFPLTST*PGIVHHLSGPSICA 183
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 57 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 85
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 54 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTSNSHSLSGF 83
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 96 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 139 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNHAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN +GSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 270 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 181
ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 576 VKAPKKRSWDTMKGVGRS*QQDRGHGSRNSA*ECATT 686
++ +RS D KGVG S QQD GHGS N A EC TT
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKECVTT 45
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSA Q WPT + H +SGF
Sbjct: 74 LNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 576 VKAPKKRSWDTMKGVGRS*QQDRGHGSRNSA*ECATT 686
++ +RS D KGVG S QQD GHGS N EC TT
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKECVTT 45
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQISGF 495
LN FGSS ASSAYQ PT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKGPTRNSHSLSGF 45
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPTWHRHQI 504
LN FGSS ASSAYQ WPT + H +
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSL 42
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 592 NAHGTP*KALVAHDSRTVAMEVGI 663
+AH TP K LVA DSRTVAMEVGI
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGI 32
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWPT 522
LN FGSS ASSAYQ WPT
Sbjct: 17 LNRAFGSSRIASSAYQKWPT 36
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 576 VKAPKKRSWDTMKGVGRS*QQDRGHGSRN 662
++ +RS D KGVG S QQD GHGS N
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWN 37
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 269 NRYGPPSGFPLTST*PGIVHH 207
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = -2
Query: 646 PRSCCHERPTPFMVSHERFLGALTLRLVHPTAPVLLTKI-------GPLGTVIRSPASSF 488
P++ E+PTPF+ S ER RL HP ++I GP T I P +
Sbjct: 52 PQAPRSEQPTPFVGSDER-------RLWHPYRAFGSSRIASSGYQNGPTRTRIHCPGFNK 104
Query: 487 E*AGVLTHLKFENR 446
+ G+LT+LKFENR
Sbjct: 105 Q-VGLLTNLKFENR 117
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 569 FGSSHSASSAYQNWPTWHRHQISGF 495
FGSS ASS YQN PT R GF
Sbjct: 78 FGSSRIASSGYQNGPTRTRIHCPGF 102
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 319 ISLSPLYPVPTIDLHVR 269
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -1
Query: 581 LNTTFGSSHSASSAYQNWP 525
LN FGSS ASSAYQN P
Sbjct: 17 LNRAFGSSRIASSAYQNGP 35
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 625 RPTPFMVSHERFLGALTLRLVHPTAPVLLTKIGPLGTVIRSPAS 494
+PTPF+ S ER L L + GPLGT I PAS
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041)
Length = 128
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 137 LPRRLVSNQ*MKARSEHKC----WDPKDGELCLVRSKSGETLMEDRSDSDVQID 286
L RR VSN + +++H+ + +DG+ V++K G++L++ D+DV ++
Sbjct: 29 LARRYVSNGKEQTKAKHETVSITFVDRDGDRQTVKAKVGDSLLDVAKDNDVDLE 82
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 633 QQDRGHGSRNSA*ECATT 686
QQD GHG SA EC TT
Sbjct: 2 QQDGGHGKLESAKECVTT 19
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,141,033
Number of Sequences: 59808
Number of extensions: 482357
Number of successful extensions: 1041
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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