Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1039
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 667 KTILDSTPIHCLFFLGEKHHKTPF 596
           + ++D      L   GEKHH  PF
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPF 212


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 553 KILYILQWSFLRTFKTVFYGVF 618
           K+ YI+  SFL  F  + + VF
Sbjct: 284 KLSYIILTSFLNNFYFIIFQVF 305


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 246 WPLKNVLAKVLRFFLTIL 193
           W   NVL K++RF   ++
Sbjct: 112 WYAGNVLCKIIRFLQAVV 129


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 281 ICNLCSLHT 307
           IC++C LHT
Sbjct: 113 ICHICELHT 121


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 542  ESVLQWHLYIIF*CGILCLSTCFVEIQNCFS 450
            E ++  HL  I   GI+C +  F     C++
Sbjct: 988  EKIVWLHLVYISFLGIICAADVFYICHVCYA 1018


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 542 ESVLQWHLYIIF*CGILCLSTCFVEIQNCFS 450
           E ++  HL  I   GI+C +  F     C++
Sbjct: 269 EKIVWLHLVYISFLGIICAADVFYICHVCYA 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,211
Number of Sequences: 336
Number of extensions: 3868
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)