BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1039 (682 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.2 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.2 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.2 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.2 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.2 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.2 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.2 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.2 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.2 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.2 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.2 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.2 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.2 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.2 AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 8.2 AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 8.2 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.8 bits (44), Expect = 6.2 Identities = 8/28 (28%), Positives = 13/28 (46%) Frame = +3 Query: 108 NYSSKVRVVGNDTSTTCYYYVIRQIFKY 191 N +K+ D YY+ +RQ F + Sbjct: 215 NLENKLNYFIEDIGLNTYYFFLRQAFPF 242 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 108 IEQIPVPVPFPVYY 121 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 108 IEQIPVPVPFPVYY 121 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 108 IEQIPVPVPFPVYY 121 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 108 IEQIPVPVPFPVYY 121 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 341 IEQIPVPVPFPVYY 354 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 341 IEQIPVPVPFPVYY 354 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 341 IEQIPVPVPFPVYY 354 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 341 IEQIPVPVPFPVYY 354 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.8 bits (44), Expect = 6.2 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 669 IKQSSIPLPFTVYF 628 I+Q +P+PF VY+ Sbjct: 330 IEQIPVPVPFPVYY 343 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 678 NFLIKQSSIPLPFTVYF 628 N++I IP+P VY+ Sbjct: 119 NYIINIEQIPVPVPVYY 135 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 678 NFLIKQSSIPLPFTVYF 628 N++I IP+P VY+ Sbjct: 119 NYIINIEQIPVPVPVYY 135 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 678 NFLIKQSSIPLPFTVYF 628 N++I IP+P VY+ Sbjct: 119 NYIINIEQIPVPVPVYY 135 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 678 NFLIKQSSIPLPFTVYF 628 N++I IP+P VY+ Sbjct: 344 NYIINIEQIPVPVPVYY 360 >AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein ASP1 protein. Length = 144 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 138 NDTSTTCYYYVIRQIF 185 N+ S TCY Y + + F Sbjct: 66 NEPSITCYMYCLLEAF 81 >AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding protein ASP1 protein. Length = 144 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 138 NDTSTTCYYYVIRQIF 185 N+ S TCY Y + + F Sbjct: 66 NEPSITCYMYCLLEAF 81 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 194,403 Number of Sequences: 438 Number of extensions: 4294 Number of successful extensions: 41 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 41 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20708550 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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