Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1039
(682 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.2
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 8.2
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 8.2
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 108 NYSSKVRVVGNDTSTTCYYYVIRQIFKY 191
N +K+ D YY+ +RQ F +
Sbjct: 215 NLENKLNYFIEDIGLNTYYFFLRQAFPF 242
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 108 IEQIPVPVPFPVYY 121
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 108 IEQIPVPVPFPVYY 121
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 108 IEQIPVPVPFPVYY 121
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 108 IEQIPVPVPFPVYY 121
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 341 IEQIPVPVPFPVYY 354
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 341 IEQIPVPVPFPVYY 354
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 341 IEQIPVPVPFPVYY 354
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 341 IEQIPVPVPFPVYY 354
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 669 IKQSSIPLPFTVYF 628
I+Q +P+PF VY+
Sbjct: 330 IEQIPVPVPFPVYY 343
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 678 NFLIKQSSIPLPFTVYF 628
N++I IP+P VY+
Sbjct: 119 NYIINIEQIPVPVPVYY 135
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 678 NFLIKQSSIPLPFTVYF 628
N++I IP+P VY+
Sbjct: 119 NYIINIEQIPVPVPVYY 135
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 678 NFLIKQSSIPLPFTVYF 628
N++I IP+P VY+
Sbjct: 119 NYIINIEQIPVPVPVYY 135
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 678 NFLIKQSSIPLPFTVYF 628
N++I IP+P VY+
Sbjct: 344 NYIINIEQIPVPVPVYY 360
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 138 NDTSTTCYYYVIRQIF 185
N+ S TCY Y + + F
Sbjct: 66 NEPSITCYMYCLLEAF 81
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 138 NDTSTTCYYYVIRQIF 185
N+ S TCY Y + + F
Sbjct: 66 NEPSITCYMYCLLEAF 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,403
Number of Sequences: 438
Number of extensions: 4294
Number of successful extensions: 41
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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