Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1038
(711 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-P... 410 e-115
AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-P... 410 e-115
U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog pro... 409 e-114
AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p pro... 409 e-114
BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p pro... 197 1e-50
AE013599-129|AAF57296.3| 499|Drosophila melanogaster CG14471-PA... 33 0.38
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 33 0.38
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 8.2
>AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-PA,
isoform A protein.
Length = 231
Score = 410 bits (1010), Expect = e-115
Identities = 185/203 (91%), Positives = 196/203 (96%)
Frame = +1
Query: 4 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 183
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71
Query: 184 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 363
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131
Query: 364 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 543
FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191
Query: 544 DEFEKLREEGRLANDGCIVQYRP 612
+ +E+LR++ RL DGC V+YRP
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRP 214
>AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-PB,
isoform B protein.
Length = 237
Score = 410 bits (1010), Expect = e-115
Identities = 185/203 (91%), Positives = 196/203 (96%)
Frame = +1
Query: 4 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 183
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77
Query: 184 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 363
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137
Query: 364 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 543
FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 197
Query: 544 DEFEKLREEGRLANDGCIVQYRP 612
+ +E+LR++ RL DGC V+YRP
Sbjct: 198 ERYEELRDDNRLEPDGCNVKYRP 220
>U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog
protein.
Length = 218
Score = 409 bits (1008), Expect = e-114
Identities = 185/201 (92%), Positives = 195/201 (97%)
Frame = +1
Query: 10 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 189
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 190 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 369
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 370 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 549
KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180
Query: 550 FEKLREEGRLANDGCIVQYRP 612
+E+LR++ RL DGC V+YRP
Sbjct: 181 YEELRDDNRLEPDGCNVKYRP 201
>AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p
protein.
Length = 218
Score = 409 bits (1008), Expect = e-114
Identities = 185/201 (92%), Positives = 195/201 (97%)
Frame = +1
Query: 10 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 189
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 190 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 369
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 370 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 549
KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180
Query: 550 FEKLREEGRLANDGCIVQYRP 612
+E+LR++ RL DGC V+YRP
Sbjct: 181 YEELRDDNRLEPDGCNVKYRP 201
>BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p
protein.
Length = 197
Score = 197 bits (481), Expect = 1e-50
Identities = 117/205 (57%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
Frame = +1
Query: 4 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 183
+ MGRRPARCYRY C+ P PK R F G + F L
Sbjct: 5 VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42
Query: 184 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 357
+E +C +LV D++ ++ RI NKMLSCAGADRLQTGMR
Sbjct: 43 GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95
Query: 358 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 537
GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96 GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155
Query: 538 ERDEFEKLREEGRLANDGCIVQYRP 612
ER+ +E+LR++ RL DGC V+YRP
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRP 180
>AE013599-129|AAF57296.3| 499|Drosophila melanogaster CG14471-PA,
isoform A protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.38
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 419 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 595
P LV GGR SS +PS SS+P+ K + R V SL R+ SL A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354
Query: 596 LCSTAREHGPLDA 634
L TA PL A
Sbjct: 355 LAKTAATVLPLYA 367
>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
isoform B protein.
Length = 1209
Score = 33.1 bits (72), Expect = 0.38
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 419 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 595
P LV GGR SS +PS SS+P+ K + R V SL R+ SL A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354
Query: 596 LCSTAREHGPLDA 634
L TA PL A
Sbjct: 355 LAKTAATVLPLYA 367
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 208 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 68
PPK S+ +RTP+ + S+ R SWD V+ R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,236,015
Number of Sequences: 53049
Number of extensions: 838551
Number of successful extensions: 2580
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2579
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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