BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1036 (414 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g37650.1 68418.m04534 hypothetical protein contains Pfam PF04... 27 3.8 At4g20850.1 68417.m03025 subtilase family protein contains simil... 27 6.6 >At5g37650.1 68418.m04534 hypothetical protein contains Pfam PF04510 : Family of unknown function (DUF577)); common family comprised of At5g37410, At5g37400, At5g37920, At5g37460, At5g37650, At5g37470, At5g37420, At5g37430 Length = 607 Score = 27.5 bits (58), Expect = 3.8 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = +2 Query: 305 DVLPLILKCVQVDGIRQCPSNCLLLI 382 ++ PL++ C+ R+C +NCL +I Sbjct: 94 EIKPLLISCLTRQNPRKCDTNCLRVI 119 >At4g20850.1 68417.m03025 subtilase family protein contains similarity to Tripeptidyl-peptidase II (EC 3.4.14.10) (TPP-II) (Tripeptidyl aminopeptidase) (Swiss-Prot:P29144) [Homo sapiens] Length = 1380 Score = 26.6 bits (56), Expect = 6.6 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 15 ARVGTTILLVLPDAVTLSGKKSRTAVRLYNRDLDLMSRAGWRH 143 +R+GT L VL D + + + +LY LDL+ GW H Sbjct: 1321 SRLGTA-LKVLDDLIQNENETANK--KLYELKLDLLEEIGWSH 1360 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,534,495 Number of Sequences: 28952 Number of extensions: 152817 Number of successful extensions: 304 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 304 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 625471056 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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