Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1025
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.7  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 697 LYILILTKIIHSPKTLINIITFNKQKTYTMDSN*LLD 587
           L+++ L   +   +  I +ITF   K++  D N L D
Sbjct: 241 LFVIYLCGRVMEEQNKIRLITFEMNKSFERDKNKLGD 277


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 406 RKLAPQLTSPTSPAVVQSRVHFHQ 477
           R  +PQ ++PT P +V+  +  H+
Sbjct: 90  RSSSPQTSAPTGPPIVRCALRKHK 113


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 98  IPNLNFIHRYFFLFGRGRNLLEFWLLHS 15
           + N+  I   FF F R R  L  WL H+
Sbjct: 641 VGNMTLILDKFF-FPRWRQTLAMWLNHN 667


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 199 FLFSILTLPPPGLYVALSRDPILDFT 122
           F+F+ +TL   GLY  L     L+F+
Sbjct: 447 FIFTFITLLTIGLYFQLCEFSRLNFS 472


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 95  PNLNFIHRYFFLFGRGRN 42
           P L +IH  +F+FG G +
Sbjct: 74  PVLVWIHGGYFIFGSGND 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,742
Number of Sequences: 336
Number of extensions: 3985
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)