Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1025
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...   200   3e-53
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   2.3  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   5.3  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    24   5.3  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.2  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   9.2  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   9.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score =  200 bits (488), Expect = 3e-53
 Identities = 91/141 (64%), Positives = 116/141 (82%), Gaps = 3/141 (2%)
 Frame = +3

Query: 48   TPTEK---KKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNI 218
            TP+++   K+VPMNK+QVG APSPNLK VKSKIGSL+NA++KPGGG VKIE +K++    
Sbjct: 634  TPSDQPLIKEVPMNKIQVGGAPSPNLKVVKSKIGSLENASHKPGGGNVKIETKKIDI-KA 692

Query: 219  TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
             P+I AKN+AY P GG KKI++ KL+WNAK K+GSL NAS+KPGGGDK+IE++K DF E+
Sbjct: 693  APRIEAKNDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASHKPGGGDKRIESIKTDFKER 752

Query: 399  AKSKVGSTANITHKPGGGAIK 461
            AK K+GS  NIT+KPGGG +K
Sbjct: 753  AKPKIGSKDNITYKPGGGDVK 773



 Score = 93.5 bits (222), Expect = 6e-21
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
 Frame = +3

Query: 126  KSKIGSLDNATYKPGGGKVKIENRKLEFGN-ITPKIAAK-NEAYTPSGGAKKIVTNKLEW 299
            K KIGSLDNA++KPGGG  +IE+ K +F     PKI +K N  Y P GG  KIV  KL+ 
Sbjct: 722  KPKIGSLDNASHKPGGGDKRIESIKTDFKERAKPKIGSKDNITYKPGGGDVKIVHQKLDI 781

Query: 300  NAKSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPL 470
             A+SK+GSL N  +KPGGGDKKI   K ++ +  +  +  + +   K G G+ ++ L
Sbjct: 782  KAESKIGSLDNLKHKPGGGDKKIFDDK-EYLKNIEHPITPSPSSQVKSGAGSAENLL 837


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/58 (25%), Positives = 21/58 (36%)
 Frame = +3

Query: 444 GGGAIKSPLPPASQLPKSDENLNEEQS*ITTRKTSHFHLYFSHKMY*QSNNQLESIVY 617
           GGG   SP  P  QLP+  +  +  Q         H H +  H  + Q  +      Y
Sbjct: 149 GGGCYGSPPVPWYQLPQQQQPSSYHQQQHPGHSQHHHHHHHHHPHHSQQQHSASPRCY 206


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
 Frame = -2

Query: 451 PPPGLWVMLAVEPTFDFA-FSPKSSLTVSIFLSPPPGL*EAFWSEPTFDFAFHSSLLVTI 275
           PP      +  +PT      +P ++ T S    PPP      W +PT     H+    T 
Sbjct: 180 PPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTT 239

Query: 274 F--LAPP 260
           +  L PP
Sbjct: 240 WSDLPPP 246


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
 Frame = -2

Query: 451 PPPGLWVMLAVEPTFDFAF-SPKSSLTVSIFLSPPPGL*EAFWSEPTFDFAFHSSLLVTI 275
           PP      +  +PT      +P ++ T S    PPP      W +PT     H+    T 
Sbjct: 180 PPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTT 239

Query: 274 F--LAPP 260
           +  L PP
Sbjct: 240 WSDLPPP 246


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 378 KLDFGEKAKSKVGSTANITHKPGGGAIKSPLPPASQLPKSDENLNEE 518
           +LD  +    KV  T          A+ S LPP ++ P+  E+ + E
Sbjct: 734 RLDVADGNAPKVAGTLGAVQPSSSEAVSSKLPPTAE-PEHSESSDVE 779


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
 Frame = -2

Query: 451 PPPGLWVMLAVEPTFDFAF-SPKSSLTVSIFLSPPPGL*EAFWSEPTFDFAFHSSLLVTI 275
           PP      +  +PT      +P ++ T S    PPP      W +PT     H+    T 
Sbjct: 180 PPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTT 239

Query: 274 FLAPP 260
           +   P
Sbjct: 240 WSDQP 244


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 45  PTPTEKKKVPMNKVQVGNAPSPNLK 119
           P  T      MN+V + N P P++K
Sbjct: 60  PAGTSADTPTMNRVSLNNIPDPDIK 84


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 417 STANITHKPGGGAIKSPLPPASQLP 491
           S A +T  PG G   SPL P +  P
Sbjct: 448 SPATLTPSPGIGGPISPLDPGNVTP 472


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
 Frame = -2

Query: 451 PPPGLWVMLAVEPTFDFA-FSPKSSLTVSIFLSPPPGL*EAFWSEPTFDFAFHSSLLVTI 275
           PP      +  +PT      +P ++ T S    PPP      W +PT     H     T 
Sbjct: 180 PPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHVPPTTTT 239

Query: 274 F--LAPP 260
           +  L PP
Sbjct: 240 WSDLPPP 246


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = -2

Query: 394 SPKSSLTVSIFLSPPPGL*EAFWSEPTFDFAFHSSLLVTIF--LAPP 260
           +P ++ T S    PPP      W +PT     H     T +  L PP
Sbjct: 200 APTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPPP 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,486
Number of Sequences: 2352
Number of extensions: 15940
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)