Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1025
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 121 4e-28
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 121 4e-28
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 121 4e-28
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 94 1e-19
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 94 1e-19
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 94 1e-19
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 93 2e-19
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 93 2e-19
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 36 0.037
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 33 0.15
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.15
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.15
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 33 0.20
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 31 0.79
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 31 1.0
L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor pr... 31 1.0
AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dau... 31 1.0
AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dau... 31 1.0
AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dau... 31 1.0
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 29 4.2
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 5.6
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 5.6
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 121 bits (292), Expect = 4e-28
Identities = 59/112 (52%), Positives = 82/112 (73%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 378
Query: 306 KSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
KSKVGS+ NA++KP GG+ +I + KL++ KA+SKVGS N+ H+PGGG ++
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW--KAESKVGSKDNMNHRPGGGNVQ 428
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +3
Query: 84 VQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSG 263
VQ+ N + A K+GS N Y+P VKI + KL + + + N A+ P+G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 264 GAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANIT 434
G +I++ KL W A+SKVGS N +++PGGG+ +I K+ + S+ ST +I+
Sbjct: 395 GNVQILSQKLNWKAESKVGSKDNMNHRPGGGNVQIFDEKIRYVSTDSSRNHSTLDIS 451
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 291
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 292 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 349
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 350 ASPKVGSKTN--YQPAKSDVK 368
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 121 bits (292), Expect = 4e-28
Identities = 59/112 (52%), Positives = 82/112 (73%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 356
Query: 306 KSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
KSKVGS+ NA++KP GG+ +I + KL++ KA+SKVGS N+ H+PGGG ++
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQILSQKLNW--KAESKVGSKDNMNHRPGGGNVQ 406
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +3
Query: 84 VQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSG 263
VQ+ N + A K+GS N Y+P VKI + KL + + + N A+ P+G
Sbjct: 316 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 372
Query: 264 GAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANIT 434
G +I++ KL W A+SKVGS N +++PGGG+ +I K+ + S+ ST +I+
Sbjct: 373 GNVQILSQKLNWKAESKVGSKDNMNHRPGGGNVQIFDEKIRYVSTDSSRNHSTLDIS 429
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 210 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 269
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 270 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 327
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 328 ASPKVGSKTN--YQPAKSDVK 346
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 121 bits (292), Expect = 4e-28
Identities = 59/112 (52%), Positives = 82/112 (73%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 378
Query: 306 KSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
KSKVGS+ NA++KP GG+ +I + KL++ KA+SKVGS N+ H+PGGG ++
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW--KAESKVGSKDNMNHRPGGGNVQ 428
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +3
Query: 84 VQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSG 263
VQ+ N + A K+GS N Y+P VKI + KL + + + N A+ P+G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 264 GAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANIT 434
G +I++ KL W A+SKVGS N +++PGGG+ +I K+ + S+ ST +I+
Sbjct: 395 GNVQILSQKLNWKAESKVGSKDNMNHRPGGGNVQIFDEKIRYVSTDSSRNHSTLDIS 451
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 291
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 292 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 349
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 350 ASPKVGSKTN--YQPAKSDVK 368
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 356
Query: 306 KSKVGSLQNASYKPGGGDKKI 368
KSKVGS+ NA++KP GG+ ++
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQV 377
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +3
Query: 123 VKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAA-KNEAYTPSGGAKKIVTNKLEW 299
VKSK+GS+ N +K GGG V+I + K + N K+ + KN + GG +I KL++
Sbjct: 269 VKSKVGSVTN--HKAGGGNVEIFSEKRLY-NAQSKVGSLKNATHVAGGGNVQIENRKLDF 325
Query: 300 NAKS-KVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
+A S KVGS N Y+P D KI + KL + +AKSKVGS N HKP GG ++
Sbjct: 326 SAASPKVGSKTN--YQPAKSDVKIVSEKLTW--QAKSKVGSMDNAAHKPAGGNVQ 376
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 210 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 269
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 270 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 327
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 328 ASPKVGSKTN--YQPAKSDVK 346
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 84 VQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSG 263
VQ+ N + A K+GS N Y+P VKI + KL + + + N A+ P+G
Sbjct: 316 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 372
Query: 264 GAKKIVTNKL 293
G +++++++
Sbjct: 373 GNVQVISSEV 382
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 172 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 230
Query: 306 KSKVGSLQNASYKPGGGDKKI 368
KSKVGS+ NA++KP GG+ ++
Sbjct: 231 KSKVGSMDNAAHKPAGGNVQV 251
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +3
Query: 123 VKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAA-KNEAYTPSGGAKKIVTNKLEW 299
VKSK+GS+ N +K GGG V+I + K + N K+ + KN + GG +I KL++
Sbjct: 143 VKSKVGSVTN--HKAGGGNVEIFSEKRLY-NAQSKVGSLKNATHVAGGGNVQIENRKLDF 199
Query: 300 NAKS-KVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
+A S KVGS N Y+P D KI + KL + +AKSKVGS N HKP GG ++
Sbjct: 200 SAASPKVGSKTN--YQPAKSDVKIVSEKLTW--QAKSKVGSMDNAAHKPAGGNVQ 250
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 84 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 143
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 144 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 201
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 202 ASPKVGSKTN--YQPAKSDVK 220
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 378
Query: 306 KSKVGSLQNASYKPGGGDKKI 368
KSKVGS+ NA++KP GG+ ++
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQV 399
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +3
Query: 123 VKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAA-KNEAYTPSGGAKKIVTNKLEW 299
VKSK+GS+ N +K GGG V+I + K + N K+ + KN + GG +I KL++
Sbjct: 291 VKSKVGSVTN--HKAGGGNVEIFSEKRLY-NAQSKVGSLKNATHVAGGGNVQIENRKLDF 347
Query: 300 NAKS-KVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIK 461
+A S KVGS N Y+P D KI + KL + +AKSKVGS N HKP GG ++
Sbjct: 348 SAASPKVGSKTN--YQPAKSDVKIVSEKLTW--QAKSKVGSMDNAAHKPAGGNVQ 398
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 291
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 292 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 349
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 350 ASPKVGSKTN--YQPAKSDVK 368
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 84 VQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSG 263
VQ+ N + A K+GS N Y+P VKI + KL + + + N A+ P+G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 264 GAKKIVTNKL 293
G +++++++
Sbjct: 395 GNVQVISSEV 404
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 378
Query: 306 KSKVGSLQNASYKPGGGD 359
KSKVGS+ NA++KP GG+
Sbjct: 379 KSKVGSMDNAAHKPAGGN 396
Score = 75.8 bits (178), Expect = 3e-14
Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Frame = +3
Query: 123 VKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAA-KNEAYTPSGGAKKIVTNKLEW 299
VKSK+GS+ N +K GGG V+I + K + N K+ + KN + GG +I KL++
Sbjct: 291 VKSKVGSVTN--HKAGGGNVEIFSEKRLY-NAQSKVGSLKNATHVAGGGNVQIENRKLDF 347
Query: 300 NAKS-KVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPP 476
+A S KVGS N Y+P D KI + KL + +AKSKVGS N HKP GG ++
Sbjct: 348 SAASPKVGSKTN--YQPAKSDVKIVSEKLTW--QAKSKVGSMDNAAHKPAGGNVQR---S 400
Query: 477 ASQLPKSDENLN 512
S+ K+D+ N
Sbjct: 401 GSKSTKNDDGHN 412
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 291
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 292 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 349
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 350 ASPKVGSKTN--YQPAKSDVK 368
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 126 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNA 305
+SK+GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P+ KIV+ KL W A
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKLTWQA 378
Query: 306 KSKVGSLQNASYKPGGGD 359
KSKVGS+ NA++KP GG+
Sbjct: 379 KSKVGSMDNAAHKPAGGN 396
Score = 75.8 bits (178), Expect = 3e-14
Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Frame = +3
Query: 123 VKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAA-KNEAYTPSGGAKKIVTNKLEW 299
VKSK+GS+ N +K GGG V+I + K + N K+ + KN + GG +I KL++
Sbjct: 291 VKSKVGSVTN--HKAGGGNVEIFSEKRLY-NAQSKVGSLKNATHVAGGGNVQIENRKLDF 347
Query: 300 NAKS-KVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPP 476
+A S KVGS N Y+P D KI + KL + +AKSKVGS N HKP GG ++
Sbjct: 348 SAASPKVGSKTN--YQPAKSDVKIVSEKLTW--QAKSKVGSMDNAAHKPAGGNVQR---S 400
Query: 477 ASQLPKSDENLN 512
S+ K+D+ N
Sbjct: 401 GSKSTKNDDGHN 412
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 TPTEKKKVPMNKVQVGNAPSPN-LKAVKSKIGSLDNATYKPGGGKVKIENRKL--EFGNI 218
TP+ ++ + + APSP + + + + +T V K+ +F N+
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRSIDNVGRMTPKVNAKFVNV 291
Query: 219 TPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKPGGGDKKIETVKLDFGEK 398
K+ + + GG +I + K +NA+SKVGSL+NA++ GGG+ +IE KLDF
Sbjct: 292 KSKVGSVTN-HKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDF-SA 349
Query: 399 AKSKVGSTANITHKPGGGAIK 461
A KVGS N ++P +K
Sbjct: 350 ASPKVGSKTN--YQPAKSDVK 368
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 35.5 bits (78), Expect = 0.037
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Frame = +3
Query: 21 QQPKLQ*IPTPTEK--KKVPMNK--------VQVGNAPSPNLKAVKSKIGSLDNATYKPG 170
+QP +Q +P P EK KK NK V+ AP + LD T KP
Sbjct: 593 EQPVVQEVPKPEEKASKKNKKNKRKSESEKKVEKPVAPVSKKPTADDNMDFLDFVTAKPE 652
Query: 171 GGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSK 314
K + +E I + A+NE +GG KK NK + N++S+
Sbjct: 653 --KTESVEEHIEAPMIVEPVHAENETAAAAGGKKKNKKNKNKKNSESE 698
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 35.5 bits (78), Expect = 0.037
Identities = 27/100 (27%), Positives = 46/100 (46%)
Frame = +3
Query: 15 RVQQPKLQ*IPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIEN 194
+V + ++ P P + ++V + KV+ AP + LD T KP K +
Sbjct: 391 KVTEQPVESAPAPPQVEQV-VEKVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVE 447
Query: 195 RKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSK 314
+E I + A+NE +GG KK NK + N++S+
Sbjct: 448 EHIEAPMIVEPVHAENETAAAAGGKKKNKKNKNKKNSESE 487
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 45 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATY 161
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 45 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATY 161
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.5 bits (73), Expect = 0.15
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 ATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKS--KVGSL 326
A K GK+KIE T + AK +A T + A+K KLE + KS + S
Sbjct: 13352 ANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEK--QTKLEKDEKSTKESESK 13409
Query: 327 QNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPPASQLPKSDEN 506
+ KP K +T K D KS+ T + P + A + ++DE
Sbjct: 13410 ETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQKVADAARKQKETDEK 13469
Query: 507 LNEEQS*ITTRKTS 548
E IT +K++
Sbjct: 13470 QKLEAE-ITAKKSA 13482
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.5 bits (73), Expect = 0.15
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 ATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKS--KVGSL 326
A K GK+KIE T + AK +A T + A+K KLE + KS + S
Sbjct: 13352 ANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEK--QTKLEKDEKSTKESESK 13409
Query: 327 QNASYKPGGGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPPASQLPKSDEN 506
+ KP K +T K D KS+ T + P + A + ++DE
Sbjct: 13410 ETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQKVADAARKQKETDEK 13469
Query: 507 LNEEQS*ITTRKTS 548
E IT +K++
Sbjct: 13470 QKLEAE-ITAKKSA 13482
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +3
Query: 51 PTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKI 230
P +++ KV+ AP + LD T KP K + +E I +
Sbjct: 543 PVQEQVKEQKKVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVEEHIEAPMIVEPV 600
Query: 231 AAKNEAYTPSGGAKKIVTNKLEWNAKSK 314
A+NE +GG KK NK + N++S+
Sbjct: 601 HAENETAAAAGGKKKNKKNKNKKNSESE 628
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 63 KKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKN 242
+ V KV+ AP + LD T KP K + +E I + A+N
Sbjct: 362 ENVVEKKVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVEEHIEAPMIVEPVHAEN 419
Query: 243 EAYTPSGGAKKIVTNKLEWNAKSK 314
E +GG KK NK + N++S+
Sbjct: 420 ETAAAAGGKKKNKKNKNKKNSESE 443
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +3
Query: 93 GNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAK 272
G+ PS K++KS+ G+ T KP G ++KL TP NE + S +
Sbjct: 231 GSRPSSPKKSMKSREGT-PKRTLKPREGS---PSKKLRSRTSTPV----NEEVSQSESRR 282
Query: 273 KIVTNKLEWNAKSKVGSLQNASYKPGGGDKK 365
T+K+E + S + P GGD+K
Sbjct: 283 SSRTDKMEVDQVSGASKRKPDGLPPPGGDEK 313
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +3
Query: 93 GNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAK 272
G+ PS K++KS+ G+ T KP G ++KL TP NE + S +
Sbjct: 231 GSRPSSPKKSMKSREGT-PKRTLKPREGS---PSKKLRSRTSTPV----NEEVSQSESRR 282
Query: 273 KIVTNKLEWNAKSKVGSLQNASYKPGGGDKK 365
T+K+E + S + P GGD+K
Sbjct: 283 SSRTDKMEVDQVSGASKRKPDGLPPPGGDEK 313
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +3
Query: 93 GNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAK 272
G+ PS K++KS+ G+ T KP G ++KL TP NE + S +
Sbjct: 231 GSRPSSPKKSMKSREGT-PKRTLKPREGS---PSKKLRSRTSTPV----NEEVSQSESRR 282
Query: 273 KIVTNKLEWNAKSKVGSLQNASYKPGGGDKK 365
T+K+E + S + P GGD+K
Sbjct: 283 SSRTDKMEVDQVSGASKRKPDGLPPPGGDEK 313
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +3
Query: 93 GNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAK 272
G+ PS K++KS+ G+ T KP G ++KL TP NE + S +
Sbjct: 231 GSRPSSPKKSMKSREGT-PKRTLKPREGS---PSKKLRSRTSTPV----NEEVSQSESRR 282
Query: 273 KIVTNKLEWNAKSKVGSLQNASYKPGGGDKK 365
T+K+E + S + P GGD+K
Sbjct: 283 SSRTDKMEVDQVSGASKRKPDGLPPPGGDEK 313
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +3
Query: 81 KVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPS 260
KV+ AP + LD T KP K + +E I + A+NE +
Sbjct: 553 KVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVEEHIEAPMIVEPVHAENETAAAA 610
Query: 261 GGAKKIVTNKLEWNAKSK 314
GG KK NK + N++S+
Sbjct: 611 GGKKKNKKNKNKKNSESE 628
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +3
Query: 81 KVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPS 260
KV+ AP + LD T KP K + +E I + A+NE +
Sbjct: 470 KVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVEEHIEAPMIVEPVHAENETAAAA 527
Query: 261 GGAKKIVTNKLEWNAKSK 314
GG KK NK + N++S+
Sbjct: 528 GGKKKNKKNKNKKNSESE 545
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +3
Query: 81 KVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPS 260
KV+ AP + LD T KP K + +E I + A+NE +
Sbjct: 738 KVEKPVAPVSKKPTADDNMDFLDFVTAKPE--KTESVEEHIEAPMIVEPVHAENETAAAA 795
Query: 261 GGAKKIVTNKLEWNAKSK 314
GG KK NK + N++S+
Sbjct: 796 GGKKKNKKNKNKKNSESE 813
>L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor
protein.
Length = 744
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 KVKIENRK---LEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKP 347
K+K + K LE GN+ P + + E K++ + +K + G + A Y P
Sbjct: 269 KIKFDMEKTDALEAGNV-PLVEPEEEMIEMVETPKELPITDFQLISKGRFGKVFKAQYTP 327
Query: 348 GGGDKKIETVK 380
G+K++ VK
Sbjct: 328 DSGEKRLVAVK 338
>AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform c protein.
Length = 592
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 KVKIENRK---LEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKP 347
K+K + K LE GN+ P + + E K++ + +K + G + A Y P
Sbjct: 117 KIKFDMEKTDALEAGNV-PLVEPEEEMIEMVETPKELPITDFQLISKGRFGKVFKAQYTP 175
Query: 348 GGGDKKIETVK 380
G+K++ VK
Sbjct: 176 DSGEKRLVAVK 186
>AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform d protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 KVKIENRK---LEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKP 347
K+K + K LE GN+ P + + E K++ + +K + G + A Y P
Sbjct: 269 KIKFDMEKTDALEAGNV-PLVEPEEEMIEMVETPKELPITDFQLISKGRFGKVFKAQYTP 327
Query: 348 GGGDKKIETVK 380
G+K++ VK
Sbjct: 328 DSGEKRLVAVK 338
>AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform a protein.
Length = 744
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 KVKIENRK---LEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLQNASYKP 347
K+K + K LE GN+ P + + E K++ + +K + G + A Y P
Sbjct: 269 KIKFDMEKTDALEAGNV-PLVEPEEEMIEMVETPKELPITDFQLISKGRFGKVFKAQYTP 327
Query: 348 GGGDKKIETVK 380
G+K++ VK
Sbjct: 328 DSGEKRLVAVK 338
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 376 SS*ISAKRQNRKLAPQLTSPTSPAVVQSRV---HFHQLHSCRNRTKT*TKSRVKSLPERL 546
SS I KRQN K +P +S + + +QS+ H Q + + KS KS+P +
Sbjct: 19 SSTIRDKRQNCKCSPPQSSCSCNSAIQSQTCTCHNTQQSTSASNCNCVLKSNSKSVPVTI 78
Query: 547 RIFIYILVIKCTNS 588
++ + C S
Sbjct: 79 KVSTKLCAPACQQS 92
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 300 NAKSKVGSLQNASYKPG-GGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPP 476
N++ G + + K GD+ ++ E K + N K G + +P PP
Sbjct: 204 NSQESAGGEEKSEEKRKLSGDRTDSLIRKQMSEMEKEITRRSQNKNIKTSGLSYTAPAPP 263
Query: 477 ASQLPKSDENLNEEQS 524
+++ E+LN+ +S
Sbjct: 264 STEKSAPKESLNQLRS 279
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 300 NAKSKVGSLQNASYKPG-GGDKKIETVKLDFGEKAKSKVGSTANITHKPGGGAIKSPLPP 476
N++ G + + K GD+ ++ E K + N K G + +P PP
Sbjct: 204 NSQESAGGEEKSEEKRKLSGDRTDSLIRKQMSEMEKEITRRSQNKNIKTSGLSYTAPAPP 263
Query: 477 ASQLPKSDENLNEEQS 524
+++ E+LN+ +S
Sbjct: 264 STEKSAPKESLNQLRS 279
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 303 AKSKVGSLQNASYKPGGGDKKIETVKLDFGEKAKSKV 413
A +++ SL A +PG D+KIE K D EK + K+
Sbjct: 328 ATNRIDSLDPALIRPGRIDRKIELPKPD--EKTRQKI 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,798
Number of Sequences: 27780
Number of extensions: 380791
Number of successful extensions: 1123
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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