BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1023 (454 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 4.7 AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 4.7 M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.3 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.3 >AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 4.7 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +3 Query: 198 FKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 296 F+ C SG+ K L+ + NLD++ H Sbjct: 75 FEFCQDSGYDKILQVLGATPRDFLQNLDALHDH 107 >AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 4.7 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +3 Query: 198 FKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 296 F+ C SG+ K L+ + NLD++ H Sbjct: 75 FEFCQDSGYDKILQVLGATPRDFLQNLDALHDH 107 >M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H40. ). Length = 74 Score = 20.6 bits (41), Expect = 8.3 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +3 Query: 189 KNKFKTCSQSGFCKRL 236 +NKFKT C+RL Sbjct: 24 ENKFKTTRYLSVCERL 39 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 20.6 bits (41), Expect = 8.3 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -1 Query: 421 SSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSADRTLP*TKILSK 275 ++ +T +P+ASA V +S A+ T+ T+P T+ L K Sbjct: 221 TTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIP-TRRLRK 268 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 130,605 Number of Sequences: 438 Number of extensions: 2874 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 11943513 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -