Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1020
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 224 1e-59
03_01_0547 + 4093196-4093657,4094267-4095148 224 1e-59
03_01_0544 + 4082528-4082989,4083585-4084466 224 1e-59
03_01_0543 + 4076981-4077442,4078145-4079026 224 1e-59
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 134 3e-32
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 134 3e-32
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 89 8e-19
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 85 2e-17
02_04_0462 + 23131433-23132836 74 4e-14
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 71 3e-13
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 52 2e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 51 3e-07
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 44 3e-05
03_05_0511 + 25056018-25059107 42 2e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 42 2e-04
02_04_0148 - 20198407-20201424 41 3e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 40 5e-04
04_01_0103 + 1082077-1082167,1083037-1085477 39 0.001
02_04_0017 + 18937774-18937864,18938505-18940945 39 0.001
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 36 0.008
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 36 0.008
01_06_0662 + 30987187-30987277,30987825-30990214 34 0.030
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 33 0.070
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.16
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 28 2.0
07_01_1023 + 8840754-8842988,8843189-8843362 28 2.6
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 2.6
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 25 3.1
04_01_0131 - 1433821-1434564,1435509-1435751 27 3.5
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 4.6
02_05_0564 + 30003817-30005778 27 6.1
12_02_1174 - 26696869-26698191 26 8.1
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 26 8.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 224 bits (548), Expect = 1e-59
Identities = 104/115 (90%), Positives = 108/115 (93%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFET+KYY T+IDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 224 bits (548), Expect = 1e-59
Identities = 104/115 (90%), Positives = 108/115 (93%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFET+KYY T+IDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 224 bits (548), Expect = 1e-59
Identities = 104/115 (90%), Positives = 108/115 (93%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFET+KYY T+IDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 224 bits (548), Expect = 1e-59
Identities = 104/115 (90%), Positives = 108/115 (93%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFET+KYY T+IDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 134 bits (323), Expect = 3e-32
Identities = 55/110 (50%), Positives = 82/110 (74%)
Frame = +2
Query: 38 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 217
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 218 DRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+RERG+T+ +A+ ET KY V ++D+PGH+D + NMI+G +QAD A+L+
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 134 bits (323), Expect = 3e-32
Identities = 55/110 (50%), Positives = 82/110 (74%)
Frame = +2
Query: 38 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 217
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 218 DRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+RERG+T+ +A+ ET KY V ++D+PGH+D + NMI+G +QAD A+L+
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 89.4 bits (212), Expect = 8e-19
Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Frame = +2
Query: 71 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRERGITIDIA 250
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + +R +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 251 LWKFETSKYYVTIIDAP----GHRDLIKNMITGTSQADCAVLI 367
FET TI+DAP GH+ + NMI+G SQAD VL+
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLV 106
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 85.0 bits (201), Expect = 2e-17
Identities = 32/67 (47%), Positives = 51/67 (76%)
Frame = +2
Query: 167 MGKGSFKYAWVLDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQ 346
+GKGSF YAW +D+ +RERGIT+ + + F+T Y+V ++D+PGH+D + NMI+G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 347 ADCAVLI 367
+D A+L+
Sbjct: 336 SDAAILV 342
>02_04_0462 + 23131433-23132836
Length = 467
Score = 73.7 bits (173), Expect = 4e-14
Identities = 41/116 (35%), Positives = 60/116 (51%)
Frame = +2
Query: 20 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 199
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 200 LDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+D +R RGITI+ A ++ET + +D PGH D +KNMITG +Q D A+L+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILV 163
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 70.9 bits (166), Expect = 3e-13
Identities = 41/113 (36%), Positives = 58/113 (51%)
Frame = +2
Query: 29 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 208
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 209 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
++ RGITI A ++ET+K + +D PGH D +KNMITG +Q D +L+
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILV 160
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 51.6 bits (118), Expect = 2e-07
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+G T+++ FET TI+DAPGH+ + NMI+G SQAD VL+
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLV 61
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 50.8 bits (116), Expect = 3e-07
Identities = 36/107 (33%), Positives = 52/107 (48%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
NI + H+DSGK+T T ++Y G I E E ++ G G+ +D + +RE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+GITI A + Y V IID PGH D + D A+L+
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILV 166
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 44.4 bits (100), Expect = 3e-05
Identities = 33/108 (30%), Positives = 55/108 (50%)
Frame = +2
Query: 41 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAD 220
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ +
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 221 RERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVL 364
+ERGITI +K+ + IID PGH D + D A++
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAIM 198
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/107 (25%), Positives = 47/107 (43%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N ++ HVD GK+T HL+ CG + G ++ +D L ++
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
R IT+ A + V +ID+PGH D + + +D A+++
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALIL 105
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N +I H+D GKST L+ G + KR EM K F LD + +RE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 227 RGITIDIAL----WKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
RGITI + + Y + +ID PGH D + + + A+L+
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLV 173
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 41.1 bits (92), Expect = 3e-04
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N ++ HVD GK++ HLI G E+ E GS A V+D L+ ++
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 227 RGITI---DIALWK--FETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
R IT+ IAL + + + V +ID+PGH D + AD A+++
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVL 117
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 40.3 bits (90), Expect = 5e-04
Identities = 28/107 (26%), Positives = 44/107 (41%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N+ VI HVD GK+T L+ +CG + +D + +RE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
RGITI + + + ++D PGH D + + AVL+
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLV 153
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 38.7 bits (86), Expect = 0.001
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 190
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 191 AWVLDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+ + E ++ + + + ++Y + +ID+PGH D + D A+++
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 38.7 bits (86), Expect = 0.001
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 190
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 191 AWVLDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+ + E ++ + + + ++Y + +ID+PGH D + D A+++
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 36.3 bits (80), Expect = 0.008
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N +I HVD GKST L+ G I K G G +Y LDKL+ +RE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 227 RGITI--DIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQAD 352
RGIT+ A + + + D P + N+I D
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVD 146
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 36.3 bits (80), Expect = 0.008
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYA 193
M K+ N+ VI HVD GKST T L+ G I + + + A E +G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERG----- 67
Query: 194 WVLDKLKADRERGITIDIALWKFETSK----YYVTIIDAPGHRDLIKNMITGTSQADCAV 361
+ K D AL FE + Y + +ID+PGH D + D A+
Sbjct: 68 -ITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGAL 126
Query: 362 LI 367
++
Sbjct: 127 VV 128
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 34.3 bits (75), Expect = 0.030
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 190
M K+ N+ V+ HVD GKST T L+ G I + + + + E +G + K
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKS 72
Query: 191 AWVLDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+ + E ++ + ++Y + +ID+PGH D + D A+++
Sbjct: 73 TGISLYYEMSDE---SLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 33.1 bits (72), Expect = 0.070
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
NI ++ HVD GK+T ++ + + + + QE ++D +RE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRD 313
RGITI + IID PGH D
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSD 194
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 31.9 bits (69), Expect = 0.16
Identities = 24/107 (22%), Positives = 45/107 (42%)
Frame = +2
Query: 47 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 226
N+ ++GH+ GK+ L+ + +D F+ E + + F V ++ +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGERHVR--FTDTRVDEQERRVSI 202
Query: 227 RGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+ + + + L Y I+D PGH + M AD AVL+
Sbjct: 203 KAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLV 249
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 278 YVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
+V+ +D PGH L+ M+ G + D A+L+
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLL 178
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 27.9 bits (59), Expect = 2.6
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 358 SAISLRGSCDHVLDQISVSRSINDGNIVLASFELPESNID--CDTTLTISL*FVQYPSIF 185
S+IS G C+ + S N+ N +S +LPE ID LTI+ Q SI
Sbjct: 138 SSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNISSKVLTITAAQHQIDSIS 197
Query: 184 EG 179
G
Sbjct: 198 TG 199
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 35 KTHINIVVIGHVDSG 79
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 24.6 bits (51), Expect(2) = 3.1
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +2
Query: 170 GKGSFKYAWVLDKLKADRERGITIDIALWKFET-SKYYVTIIDAPGHRDLIKNMITGTSQ 346
GK S + + A GIT I + E S +T +D PGH G +
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 347 ADCAVLI 367
D VL+
Sbjct: 269 TDIVVLV 275
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2
Query: 50 IVVIGHVDSGKST 88
+ ++GHVD GK++
Sbjct: 200 VTIMGHVDHGKTS 212
>04_01_0131 - 1433821-1434564,1435509-1435751
Length = 328
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 281 VTIIDAPGHRDLIKNMITGTSQADCA 358
VT I H++L+K I GTS CA
Sbjct: 52 VTTISEARHKNLLKGDIAGTSSISCA 77
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 68 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRERGITIDI 247
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 248 AL 253
+
Sbjct: 488 TI 489
>02_05_0564 + 30003817-30005778
Length = 653
Score = 26.6 bits (56), Expect = 6.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 131 VCQYHHICRSNDQWWW 84
V Y H+C + +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 128 KRTIEKFEKEAQEMGK 175
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 287 IIDAPGHRDLIKNMITGTSQADCAVLI 367
+ID PGH+ G+S D A+L+
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILV 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,844,541
Number of Sequences: 37544
Number of extensions: 190430
Number of successful extensions: 492
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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