Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1020
(369 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 241 2e-66
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 239 6e-66
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 122 1e-30
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 91 4e-21
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.21
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.50
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 20 8.1
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 8.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 241 bits (589), Expect = 2e-66
Identities = 112/115 (97%), Positives = 113/115 (98%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFETSKYYVTIIDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 239 bits (586), Expect = 6e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 23 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 202
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 203 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DKLKA+RERGITIDIALWKFET+KYYVTIIDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 122 bits (295), Expect = 1e-30
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +2
Query: 194 WVLDKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
WVLDKLKA+RERGITIDIALWKFETSKYYVTIIDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 58
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 91.1 bits (216), Expect = 4e-21
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 242 DIALWKFETSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
DIALWKFETSKYYVTIIDAPGHRD IKNMITGTSQADCAVLI
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 42
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.21
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 35 KTHINIVVIGHVDSGKST 88
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 24.2 bits (50), Expect = 0.50
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 281 VTIIDAPGHRDLIKNMITGTSQADCAVLI 367
VT +D PGH I G D VL+
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLV 223
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 44 INIVVIGHVDSGKST 88
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 125 DKRTIEKFEKEAQEMG 172
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 125 DKRTIEKFEKEAQEMG 172
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 125 DKRTIEKFEKEAQEMG 172
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.6 bits (41), Expect = 6.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 266 TSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
T KYY D P + IKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 20.2 bits (40), Expect = 8.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 TSKYYVTIIDAPGHRDLIKNMITGTSQADCAVLI 367
T KYY D P + IKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 225 SRSAFSLSNTQAYLKDPLPISWASFSN 145
+RS F L N +KD L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,368
Number of Sequences: 438
Number of extensions: 1860
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8804355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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