BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1018 (602 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 26 0.21 AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 1.5 AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 1.5 X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 23 2.0 U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 2.0 AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 23 2.0 AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 3.5 EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 6.1 AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 21 6.1 AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 21 6.1 AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 21 6.1 AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.1 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.1 AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 6.1 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.1 AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 6.1 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.1 AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 6.1 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.1 AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 8.0 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.0 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.0 >EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglucosaminidase NAG3 protein. Length = 582 Score = 26.2 bits (55), Expect = 0.21 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +3 Query: 3 ISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQL 137 + GN++ I +NI +S+ N + K EL L SD L Sbjct: 126 LKPGNQSTPGIKLSINIILSDPNTNKLKLNTNESYELTVLKSDSL 170 >AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain transcription factor Maxillopediaprotein. Length = 523 Score = 23.4 bits (48), Expect = 1.5 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +2 Query: 506 PGYSNHPLHRSGNGHGARHFP 568 P Y+++ H SG+G H P Sbjct: 386 PNYNHYGYHYSGDGGEVAHLP 406 >AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia ortholog protein. Length = 471 Score = 23.4 bits (48), Expect = 1.5 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +2 Query: 506 PGYSNHPLHRSGNGHGARHFP 568 P Y+++ H SG+G H P Sbjct: 334 PNYNHYGYHYSGDGGEVAHLP 354 >X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. Length = 251 Score = 23.0 bits (47), Expect = 2.0 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -2 Query: 511 PRGRGMSQRMKARKGEISGMFEVRV*AIDFFKLSKISRPSSTPVTMDAKLSSSRIMSAA 335 PR +++ + + +I F+ R +++K+S P S+P + LS + S A Sbjct: 116 PRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTA 174 >U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. Length = 425 Score = 23.0 bits (47), Expect = 2.0 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = +2 Query: 65 GESPRSQSRCRPRNRAPRTELR----PAR*DPQVPHRNRVRPHLPATEAD 202 G++P ++ PR R T+ + P R P + RP PA + Sbjct: 303 GQNPGEKTNIAPRERPRATDHQRRNEPKRPRPNIDRHEVTRPAAPANRGN 352 >AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. Length = 246 Score = 23.0 bits (47), Expect = 2.0 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -2 Query: 511 PRGRGMSQRMKARKGEISGMFEVRV*AIDFFKLSKISRPSSTPVTMDAKLSSSRIMSAA 335 PR +++ + + +I F+ R +++K+S P S+P + LS + S A Sbjct: 107 PRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTA 165 >AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. Length = 456 Score = 22.2 bits (45), Expect = 3.5 Identities = 11/33 (33%), Positives = 14/33 (42%) Frame = +2 Query: 473 PCLHPLRHSSAPGYSNHPLHRSGNGHGARHFPG 571 P L L HS ++ HP H + A H G Sbjct: 34 PGLQGLHHSPHLNHAMHPYHANHVNPTANHVMG 66 >EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 protein. Length = 493 Score = 21.4 bits (43), Expect = 6.1 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +3 Query: 402 LIFDNLKKSIAYTLTSNIPEISPFLAF 482 L++ K +Y + N+P PFL F Sbjct: 12 LLYYIYSKHYSYWQSKNVPTDKPFLFF 38 >AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-like protein protein. Length = 143 Score = 21.4 bits (43), Expect = 6.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +2 Query: 143 DPQVPHRNRVRPHLPAT 193 DP++P R + P P+T Sbjct: 47 DPEMPKRMYIHPDSPST 63 >AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-like protein protein. Length = 134 Score = 21.4 bits (43), Expect = 6.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +2 Query: 143 DPQVPHRNRVRPHLPAT 193 DP++P R + P P+T Sbjct: 47 DPEMPKRMYIHPDSPST 63 >AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like protein protein. Length = 242 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 588 IQHPRKPGKWRAPCPFPDR 532 +Q+PR G + AP P D+ Sbjct: 1 LQYPRSVGVYGAPYPSTDQ 19 >AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax protein. Length = 230 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax protein. Length = 157 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 503 APGYSNHPLHRSGNGHG 553 AP Y HP GHG Sbjct: 49 APQYPQHPYAAPAPGHG 65 >AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase protein. Length = 677 Score = 21.0 bits (42), Expect = 8.0 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -2 Query: 226 RRWQPSTM 203 RRW PSTM Sbjct: 618 RRWMPSTM 625 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 21.0 bits (42), Expect = 8.0 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -2 Query: 226 RRWQPSTM 203 RRW PSTM Sbjct: 851 RRWMPSTM 858 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 21.0 bits (42), Expect = 8.0 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -2 Query: 226 RRWQPSTM 203 RRW PSTM Sbjct: 851 RRWMPSTM 858 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 135,789 Number of Sequences: 336 Number of extensions: 2897 Number of successful extensions: 25 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15248386 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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